Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A426:A427
Extra
PDB:
ATOM 1 O3' A A 425 53.509 112.550 24.321 1.00 52.91 O
ATOM 2 P C A 426 53.706 113.655 25.467 1.00 54.30 P
ATOM 3 OP1 C A 426 52.378 113.791 26.116 1.00 52.80 O
ATOM 4 OP2 C A 426 54.377 114.867 24.915 1.00 55.10 O
ATOM 5 O5' C A 426 54.686 112.928 26.489 1.00 53.87 O
ATOM 6 C5' C A 426 54.204 111.864 27.338 1.00 52.68 C
ATOM 7 C4' C A 426 55.088 111.732 28.558 1.00 51.97 C
ATOM 8 O4' C A 426 56.368 111.183 28.139 1.00 52.56 O
ATOM 9 C3' C A 426 55.406 113.040 29.282 1.00 51.68 C
ATOM 10 O3' C A 426 55.565 112.841 30.683 1.00 50.13 O
ATOM 11 C2' C A 426 56.746 113.424 28.676 1.00 52.51 C
ATOM 12 O2' C A 426 57.491 114.307 29.490 1.00 54.24 O
ATOM 13 C1' C A 426 57.405 112.053 28.532 1.00 52.11 C
ATOM 14 N1 C A 426 58.482 111.984 27.528 1.00 51.15 N
ATOM 15 C2 C A 426 59.714 111.470 27.917 1.00 51.03 C
ATOM 16 O2 C A 426 59.851 111.056 29.076 1.00 52.61 O
ATOM 17 N3 C A 426 60.727 111.432 27.025 1.00 50.82 N
ATOM 18 C4 C A 426 60.541 111.877 25.782 1.00 51.03 C
ATOM 19 N4 C A 426 61.578 111.827 24.941 1.00 49.99 N
ATOM 20 C5 C A 426 59.287 112.393 25.348 1.00 50.98 C
ATOM 21 C6 C A 426 58.291 112.423 26.245 1.00 51.30 C
ATOM 22 P A A 427 54.838 113.840 31.720 1.00 51.38 P
ATOM 23 OP1 A A 427 54.205 112.983 32.758 1.00 50.77 O
ATOM 24 OP2 A A 427 54.006 114.815 30.969 1.00 49.81 O
ATOM 25 O5' A A 427 56.027 114.683 32.366 1.00 49.06 O
TER
ATOM 1 O3' C B 426 55.565 112.841 30.683 1.00 50.13 O
ATOM 2 P A B 427 54.838 113.840 31.720 1.00 51.38 P
ATOM 3 OP1 A B 427 54.205 112.983 32.758 1.00 50.77 O
ATOM 4 OP2 A B 427 54.006 114.815 30.969 1.00 49.81 O
ATOM 5 O5' A B 427 56.027 114.683 32.366 1.00 49.06 O
ATOM 6 C5' A B 427 56.917 114.110 33.346 1.00 45.91 C
ATOM 7 C4' A B 427 57.876 115.165 33.833 1.00 44.86 C
ATOM 8 O4' A B 427 58.747 115.577 32.745 1.00 45.68 O
ATOM 9 C3' A B 427 57.255 116.467 34.289 1.00 43.20 C
ATOM 10 O3' A B 427 56.735 116.323 35.592 1.00 42.59 O
ATOM 11 C2' A B 427 58.449 117.407 34.197 1.00 44.01 C
ATOM 12 O2' A B 427 59.403 117.165 35.211 1.00 44.11 O
ATOM 13 C1' A B 427 59.066 116.950 32.876 1.00 44.33 C
ATOM 14 N9 A B 427 58.507 117.661 31.723 1.00 45.22 N
ATOM 15 C8 A B 427 57.548 117.219 30.843 1.00 46.44 C
ATOM 16 N7 A B 427 57.259 118.082 29.896 1.00 47.59 N
ATOM 17 C5 A B 427 58.079 119.164 30.171 1.00 44.97 C
ATOM 18 C6 A B 427 58.260 120.388 29.527 1.00 44.91 C
ATOM 19 N6 A B 427 57.615 120.751 28.419 1.00 44.79 N
ATOM 20 N1 A B 427 59.150 121.242 30.060 1.00 45.79 N
ATOM 21 C2 A B 427 59.814 120.875 31.164 1.00 45.21 C
ATOM 22 N3 A B 427 59.737 119.750 31.854 1.00 44.53 N
ATOM 23 C4 A B 427 58.844 118.923 31.298 1.00 44.86 C
ATOM 24 P C B 428 55.456 117.182 36.042 1.00 42.46 P
ATOM 25 OP1 C B 428 55.095 116.744 37.400 1.00 42.18 O
ATOM 26 OP2 C B 428 54.433 117.158 34.976 1.00 46.68 O
ATOM 27 O5' C B 428 56.008 118.665 36.170 1.00 44.45 O
TER
ATOM 2 P C A 426 53.706 113.655 25.467 1.00 54.30 P
ATOM 3 OP1 C A 426 52.378 113.791 26.116 1.00 52.80 O
ATOM 4 OP2 C A 426 54.377 114.867 24.915 1.00 55.10 O
ATOM 5 O5' C A 426 54.686 112.928 26.489 1.00 53.87 O
ATOM 6 C5' C A 426 54.204 111.864 27.338 1.00 52.68 C
ATOM 7 C4' C A 426 55.088 111.732 28.558 1.00 51.97 C
ATOM 8 O4' C A 426 56.368 111.183 28.139 1.00 52.56 O
ATOM 9 C3' C A 426 55.406 113.040 29.282 1.00 51.68 C
ATOM 10 O3' C A 426 55.565 112.841 30.683 1.00 50.13 O
ATOM 11 C2' C A 426 56.746 113.424 28.676 1.00 52.51 C
ATOM 12 O2' C A 426 57.491 114.307 29.490 1.00 54.24 O
ATOM 13 C1' C A 426 57.405 112.053 28.532 1.00 52.11 C
ATOM 14 N1 C A 426 58.482 111.984 27.528 1.00 51.15 N
ATOM 15 C2 C A 426 59.714 111.470 27.917 1.00 51.03 C
ATOM 16 O2 C A 426 59.851 111.056 29.076 1.00 52.61 O
ATOM 17 N3 C A 426 60.727 111.432 27.025 1.00 50.82 N
ATOM 18 C4 C A 426 60.541 111.877 25.782 1.00 51.03 C
ATOM 19 N4 C A 426 61.578 111.827 24.941 1.00 49.99 N
ATOM 20 C5 C A 426 59.287 112.393 25.348 1.00 50.98 C
ATOM 21 C6 C A 426 58.291 112.423 26.245 1.00 51.30 C
ATOM 22 P A A 427 54.838 113.840 31.720 1.00 51.38 P
ATOM 23 OP1 A A 427 54.205 112.983 32.758 1.00 50.77 O
ATOM 24 OP2 A A 427 54.006 114.815 30.969 1.00 49.81 O
ATOM 25 O5' A A 427 56.027 114.683 32.366 1.00 49.06 O
TER
ATOM 1 O3' C B 426 55.565 112.841 30.683 1.00 50.13 O
ATOM 2 P A B 427 54.838 113.840 31.720 1.00 51.38 P
ATOM 3 OP1 A B 427 54.205 112.983 32.758 1.00 50.77 O
ATOM 4 OP2 A B 427 54.006 114.815 30.969 1.00 49.81 O
ATOM 5 O5' A B 427 56.027 114.683 32.366 1.00 49.06 O
ATOM 6 C5' A B 427 56.917 114.110 33.346 1.00 45.91 C
ATOM 7 C4' A B 427 57.876 115.165 33.833 1.00 44.86 C
ATOM 8 O4' A B 427 58.747 115.577 32.745 1.00 45.68 O
ATOM 9 C3' A B 427 57.255 116.467 34.289 1.00 43.20 C
ATOM 10 O3' A B 427 56.735 116.323 35.592 1.00 42.59 O
ATOM 11 C2' A B 427 58.449 117.407 34.197 1.00 44.01 C
ATOM 12 O2' A B 427 59.403 117.165 35.211 1.00 44.11 O
ATOM 13 C1' A B 427 59.066 116.950 32.876 1.00 44.33 C
ATOM 14 N9 A B 427 58.507 117.661 31.723 1.00 45.22 N
ATOM 15 C8 A B 427 57.548 117.219 30.843 1.00 46.44 C
ATOM 16 N7 A B 427 57.259 118.082 29.896 1.00 47.59 N
ATOM 17 C5 A B 427 58.079 119.164 30.171 1.00 44.97 C
ATOM 18 C6 A B 427 58.260 120.388 29.527 1.00 44.91 C
ATOM 19 N6 A B 427 57.615 120.751 28.419 1.00 44.79 N
ATOM 20 N1 A B 427 59.150 121.242 30.060 1.00 45.79 N
ATOM 21 C2 A B 427 59.814 120.875 31.164 1.00 45.21 C
ATOM 22 N3 A B 427 59.737 119.750 31.854 1.00 44.53 N
ATOM 23 C4 A B 427 58.844 118.923 31.298 1.00 44.86 C
ATOM 24 P C B 428 55.456 117.182 36.042 1.00 42.46 P
ATOM 25 OP1 C B 428 55.095 116.744 37.400 1.00 42.18 O
ATOM 26 OP2 C B 428 54.433 117.158 34.976 1.00 46.68 O
ATOM 27 O5' C B 428 56.008 118.665 36.170 1.00 44.45 O
TER
Atoms:
C2: (59.714,111.470,27.917)
OP1: (52.378,113.791,26.116)
OP2: (54.377,114.867,24.915)
C4: (60.541,111.877,25.782)
O5': (54.686,112.928,26.489)
C3': (55.406,113.040,29.282)
C1': (57.405,112.053,28.532)
O4': (56.368,111.183,28.139)
C5': (54.204,111.864,27.338)
P: (53.706,113.655,25.467)
O2: (59.851,111.056,29.076)
C4': (55.088,111.732,28.558)
C2': (56.746,113.424,28.676)
O2': (57.491,114.307,29.490)
N1: (58.482,111.984,27.528)
N3: (60.727,111.432,27.025)
N4: (61.578,111.827,24.941)
C6: (58.291,112.423,26.245)
C5: (59.287,112.393,25.348)
O3': (55.565,112.841,30.683)
OP1: (52.378,113.791,26.116)
OP2: (54.377,114.867,24.915)
C4: (60.541,111.877,25.782)
O5': (54.686,112.928,26.489)
C3': (55.406,113.040,29.282)
C1': (57.405,112.053,28.532)
O4': (56.368,111.183,28.139)
C5': (54.204,111.864,27.338)
P: (53.706,113.655,25.467)
O2: (59.851,111.056,29.076)
C4': (55.088,111.732,28.558)
C2': (56.746,113.424,28.676)
O2': (57.491,114.307,29.490)
N1: (58.482,111.984,27.528)
N3: (60.727,111.432,27.025)
N4: (61.578,111.827,24.941)
C6: (58.291,112.423,26.245)
C5: (59.287,112.393,25.348)
O3': (55.565,112.841,30.683)
OP1: (54.205,112.983,32.758)
OP2: (54.006,114.815,30.969)
C3': (57.255,116.467,34.289)
C1': (59.066,116.950,32.876)
C5': (56.917,114.110,33.346)
O4': (58.747,115.577,32.745)
C8: (57.548,117.219,30.843)
O2': (59.403,117.165,35.211)
C6: (58.260,120.388,29.527)
C5: (58.079,119.164,30.171)
C4: (58.844,118.923,31.298)
P: (54.838,113.840,31.720)
C4': (57.876,115.165,33.833)
C2': (58.449,117.407,34.197)
C2: (59.814,120.875,31.164)
N1: (59.150,121.242,30.060)
N3: (59.737,119.750,31.854)
N6: (57.615,120.751,28.419)
N7: (57.259,118.082,29.896)
N9: (58.507,117.661,31.723)
O5': (56.027,114.683,32.366)
O3': (56.735,116.323,35.592)
OP2: (54.006,114.815,30.969)
C3': (57.255,116.467,34.289)
C1': (59.066,116.950,32.876)
C5': (56.917,114.110,33.346)
O4': (58.747,115.577,32.745)
C8: (57.548,117.219,30.843)
O2': (59.403,117.165,35.211)
C6: (58.260,120.388,29.527)
C5: (58.079,119.164,30.171)
C4: (58.844,118.923,31.298)
P: (54.838,113.840,31.720)
C4': (57.876,115.165,33.833)
C2': (58.449,117.407,34.197)
C2: (59.814,120.875,31.164)
N1: (59.150,121.242,30.060)
N3: (59.737,119.750,31.854)
N6: (57.615,120.751,28.419)
N7: (57.259,118.082,29.896)
N9: (58.507,117.661,31.723)
O5': (56.027,114.683,32.366)
O3': (56.735,116.323,35.592)
Image (generated by PyMOL):