ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A426:A427

Extra

PDB:
ATOM 1 O3' A A 425 53.152 112.558 23.767 1.00 41.76 O
ATOM 2 P C A 426 53.378 113.672 24.907 1.00 43.27 P
ATOM 3 OP1 C A 426 52.055 113.883 25.534 1.00 42.21 O
ATOM 4 OP2 C A 426 54.118 114.837 24.360 1.00 45.09 O
ATOM 5 O5' C A 426 54.338 112.949 25.949 1.00 43.20 O
ATOM 6 C5' C A 426 53.857 111.881 26.785 1.00 41.90 C
ATOM 7 C4' C A 426 54.734 111.752 28.009 1.00 41.70 C
ATOM 8 O4' C A 426 56.014 111.173 27.622 1.00 42.74 O
ATOM 9 C3' C A 426 55.060 113.060 28.727 1.00 41.62 C
ATOM 10 O3' C A 426 55.216 112.835 30.124 1.00 40.87 O
ATOM 11 C2' C A 426 56.418 113.420 28.139 1.00 42.10 C
ATOM 12 O2' C A 426 57.166 114.263 28.993 1.00 44.25 O
ATOM 13 C1' C A 426 57.059 112.039 28.004 1.00 41.94 C
ATOM 14 N1 C A 426 58.144 111.940 27.008 1.00 41.61 N
ATOM 15 C2 C A 426 59.391 111.464 27.426 1.00 41.68 C
ATOM 16 O2 C A 426 59.533 111.110 28.601 1.00 41.57 O
ATOM 17 N3 C A 426 60.411 111.401 26.536 1.00 41.31 N
ATOM 18 C4 C A 426 60.219 111.788 25.272 1.00 40.52 C
ATOM 19 N4 C A 426 61.259 111.736 24.443 1.00 40.85 N
ATOM 20 C5 C A 426 58.953 112.253 24.809 1.00 40.70 C
ATOM 21 C6 C A 426 57.952 112.312 25.703 1.00 41.41 C
ATOM 22 P A A 427 54.488 113.806 31.186 1.00 41.62 P
ATOM 23 OP1 A A 427 53.927 112.910 32.219 1.00 41.94 O
ATOM 24 OP2 A A 427 53.604 114.795 30.515 1.00 40.64 O
ATOM 25 O5' A A 427 55.682 114.614 31.859 1.00 40.35 O
TER

ATOM 1 O3' C B 426 55.216 112.835 30.124 1.00 40.87 O
ATOM 2 P A B 427 54.488 113.806 31.186 1.00 41.62 P
ATOM 3 OP1 A B 427 53.927 112.910 32.219 1.00 41.94 O
ATOM 4 OP2 A B 427 53.604 114.795 30.515 1.00 40.64 O
ATOM 5 O5' A B 427 55.682 114.614 31.859 1.00 40.35 O
ATOM 6 C5' A B 427 56.557 113.987 32.809 1.00 38.60 C
ATOM 7 C4' A B 427 57.536 114.995 33.329 1.00 37.59 C
ATOM 8 O4' A B 427 58.393 115.419 32.235 1.00 39.60 O
ATOM 9 C3' A B 427 56.924 116.291 33.828 1.00 36.92 C
ATOM 10 O3' A B 427 56.418 116.159 35.149 1.00 36.43 O
ATOM 11 C2' A B 427 58.110 117.232 33.719 1.00 38.42 C
ATOM 12 O2' A B 427 59.061 116.971 34.729 1.00 39.79 O
ATOM 13 C1' A B 427 58.702 116.794 32.379 1.00 39.44 C
ATOM 14 N9 A B 427 58.121 117.517 31.245 1.00 41.68 N
ATOM 15 C8 A B 427 57.113 117.111 30.394 1.00 42.60 C
ATOM 16 N7 A B 427 56.806 118.001 29.478 1.00 43.05 N
ATOM 17 C5 A B 427 57.669 119.057 29.738 1.00 41.46 C
ATOM 18 C6 A B 427 57.852 120.296 29.117 1.00 40.88 C
ATOM 19 N6 A B 427 57.163 120.704 28.046 1.00 41.48 N
ATOM 20 N1 A B 427 58.789 121.118 29.632 1.00 43.06 N
ATOM 21 C2 A B 427 59.496 120.707 30.693 1.00 42.29 C
ATOM 22 N3 A B 427 59.426 119.563 31.355 1.00 40.67 N
ATOM 23 C4 A B 427 58.482 118.773 30.823 1.00 41.35 C
ATOM 24 P C B 428 55.161 117.053 35.617 1.00 38.23 P
ATOM 25 OP1 C B 428 54.777 116.645 36.997 1.00 38.77 O
ATOM 26 OP2 C B 428 54.141 117.047 34.541 1.00 38.81 O
ATOM 27 O5' C B 428 55.741 118.529 35.723 1.00 38.67 O
TER

Atoms:
C2: (59.391,111.464,27.426)
OP1: (52.055,113.883,25.534)
OP2: (54.118,114.837,24.360)
C4: (60.219,111.788,25.272)
O5': (54.338,112.949,25.949)
C3': (55.060,113.060,28.727)
C1': (57.059,112.039,28.004)
O4': (56.014,111.173,27.622)
C5': (53.857,111.881,26.785)
P: (53.378,113.672,24.907)
O2: (59.533,111.110,28.601)
C4': (54.734,111.752,28.009)
C2': (56.418,113.420,28.139)
O2': (57.166,114.263,28.993)
N1: (58.144,111.940,27.008)
N3: (60.411,111.401,26.536)
N4: (61.259,111.736,24.443)
C6: (57.952,112.312,25.703)
C5: (58.953,112.253,24.809)
O3': (55.216,112.835,30.124)
OP1: (53.927,112.910,32.219)
OP2: (53.604,114.795,30.515)
C3': (56.924,116.291,33.828)
C1': (58.702,116.794,32.379)
C5': (56.557,113.987,32.809)
O4': (58.393,115.419,32.235)
C8: (57.113,117.111,30.394)
O2': (59.061,116.971,34.729)
C6: (57.852,120.296,29.117)
C5: (57.669,119.057,29.738)
C4: (58.482,118.773,30.823)
P: (54.488,113.806,31.186)
C4': (57.536,114.995,33.329)
C2': (58.110,117.232,33.719)
C2: (59.496,120.707,30.693)
N1: (58.789,121.118,29.632)
N3: (59.426,119.563,31.355)
N6: (57.163,120.704,28.046)
N7: (56.806,118.001,29.478)
N9: (58.121,117.517,31.245)
O5': (55.682,114.614,31.859)
O3': (56.418,116.159,35.149)
Image (generated by PyMOL):
PyMOL image
show in jmol