Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0426:0427
Extra
PDB:
ATOM 1 O3' A A 425 53.216 111.830 23.890 1.00 42.95 O
ATOM 2 P C A 426 53.397 113.014 24.953 1.00 43.67 P
ATOM 3 OP1 C A 426 52.074 113.296 25.567 1.00 44.68 O
ATOM 4 OP2 C A 426 54.142 114.109 24.289 1.00 45.21 O
ATOM 5 O5' C A 426 54.365 112.384 26.046 1.00 43.21 O
ATOM 6 C5' C A 426 53.920 111.334 26.912 1.00 40.07 C
ATOM 7 C4' C A 426 54.834 111.230 28.107 1.00 40.10 C
ATOM 8 O4' C A 426 56.111 110.666 27.695 1.00 39.06 O
ATOM 9 C3' C A 426 55.157 112.545 28.815 1.00 39.68 C
ATOM 10 O3' C A 426 55.258 112.326 30.214 1.00 40.22 O
ATOM 11 C2' C A 426 56.527 112.906 28.250 1.00 39.69 C
ATOM 12 O2' C A 426 57.300 113.706 29.126 1.00 41.64 O
ATOM 13 C1' C A 426 57.158 111.525 28.099 1.00 37.93 C
ATOM 14 N1 C A 426 58.255 111.431 27.117 1.00 36.79 N
ATOM 15 C2 C A 426 59.481 110.887 27.536 1.00 35.93 C
ATOM 16 O2 C A 426 59.622 110.552 28.724 1.00 35.84 O
ATOM 17 N3 C A 426 60.484 110.753 26.640 1.00 35.26 N
ATOM 18 C4 C A 426 60.317 111.162 25.380 1.00 35.45 C
ATOM 19 N4 C A 426 61.348 111.021 24.545 1.00 32.68 N
ATOM 20 C5 C A 426 59.091 111.737 24.928 1.00 33.70 C
ATOM 21 C6 C A 426 58.093 111.850 25.821 1.00 35.49 C
ATOM 22 P A A 427 54.560 113.356 31.226 1.00 42.88 P
ATOM 23 OP1 A A 427 53.865 112.541 32.254 1.00 45.14 O
ATOM 24 OP2 A A 427 53.794 114.365 30.453 1.00 41.37 O
ATOM 25 O5' A A 427 55.787 114.106 31.910 1.00 42.87 O
TER
ATOM 1 O3' C B 426 55.258 112.326 30.214 1.00 40.22 O
ATOM 2 P A B 427 54.560 113.356 31.226 1.00 42.88 P
ATOM 3 OP1 A B 427 53.865 112.541 32.254 1.00 45.14 O
ATOM 4 OP2 A B 427 53.794 114.365 30.453 1.00 41.37 O
ATOM 5 O5' A B 427 55.787 114.106 31.910 1.00 42.87 O
ATOM 6 C5' A B 427 56.613 113.449 32.888 1.00 38.26 C
ATOM 7 C4' A B 427 57.628 114.419 33.442 1.00 37.61 C
ATOM 8 O4' A B 427 58.541 114.822 32.385 1.00 38.92 O
ATOM 9 C3' A B 427 57.061 115.729 33.959 1.00 35.83 C
ATOM 10 O3' A B 427 56.566 115.599 35.276 1.00 33.87 O
ATOM 11 C2' A B 427 58.266 116.652 33.866 1.00 36.87 C
ATOM 12 O2' A B 427 59.210 116.433 34.893 1.00 38.41 O
ATOM 13 C1' A B 427 58.885 116.189 32.546 1.00 37.97 C
ATOM 14 N9 A B 427 58.350 116.937 31.407 1.00 37.86 N
ATOM 15 C8 A B 427 57.337 116.569 30.552 1.00 37.32 C
ATOM 16 N7 A B 427 57.061 117.470 29.641 1.00 37.51 N
ATOM 17 C5 A B 427 57.956 118.498 29.906 1.00 37.45 C
ATOM 18 C6 A B 427 58.173 119.746 29.295 1.00 36.82 C
ATOM 19 N6 A B 427 57.479 120.189 28.247 1.00 36.02 N
ATOM 20 N1 A B 427 59.141 120.533 29.807 1.00 36.30 N
ATOM 21 C2 A B 427 59.839 120.088 30.859 1.00 35.55 C
ATOM 22 N3 A B 427 59.731 118.942 31.517 1.00 34.71 N
ATOM 23 C4 A B 427 58.760 118.181 30.987 1.00 37.42 C
ATOM 24 P C B 428 55.268 116.433 35.724 1.00 36.57 P
ATOM 25 OP1 C B 428 54.889 115.931 37.067 1.00 37.14 O
ATOM 26 OP2 C B 428 54.276 116.411 34.624 1.00 35.99 O
ATOM 27 O5' C B 428 55.787 117.931 35.897 1.00 37.56 O
TER
ATOM 2 P C A 426 53.397 113.014 24.953 1.00 43.67 P
ATOM 3 OP1 C A 426 52.074 113.296 25.567 1.00 44.68 O
ATOM 4 OP2 C A 426 54.142 114.109 24.289 1.00 45.21 O
ATOM 5 O5' C A 426 54.365 112.384 26.046 1.00 43.21 O
ATOM 6 C5' C A 426 53.920 111.334 26.912 1.00 40.07 C
ATOM 7 C4' C A 426 54.834 111.230 28.107 1.00 40.10 C
ATOM 8 O4' C A 426 56.111 110.666 27.695 1.00 39.06 O
ATOM 9 C3' C A 426 55.157 112.545 28.815 1.00 39.68 C
ATOM 10 O3' C A 426 55.258 112.326 30.214 1.00 40.22 O
ATOM 11 C2' C A 426 56.527 112.906 28.250 1.00 39.69 C
ATOM 12 O2' C A 426 57.300 113.706 29.126 1.00 41.64 O
ATOM 13 C1' C A 426 57.158 111.525 28.099 1.00 37.93 C
ATOM 14 N1 C A 426 58.255 111.431 27.117 1.00 36.79 N
ATOM 15 C2 C A 426 59.481 110.887 27.536 1.00 35.93 C
ATOM 16 O2 C A 426 59.622 110.552 28.724 1.00 35.84 O
ATOM 17 N3 C A 426 60.484 110.753 26.640 1.00 35.26 N
ATOM 18 C4 C A 426 60.317 111.162 25.380 1.00 35.45 C
ATOM 19 N4 C A 426 61.348 111.021 24.545 1.00 32.68 N
ATOM 20 C5 C A 426 59.091 111.737 24.928 1.00 33.70 C
ATOM 21 C6 C A 426 58.093 111.850 25.821 1.00 35.49 C
ATOM 22 P A A 427 54.560 113.356 31.226 1.00 42.88 P
ATOM 23 OP1 A A 427 53.865 112.541 32.254 1.00 45.14 O
ATOM 24 OP2 A A 427 53.794 114.365 30.453 1.00 41.37 O
ATOM 25 O5' A A 427 55.787 114.106 31.910 1.00 42.87 O
TER
ATOM 1 O3' C B 426 55.258 112.326 30.214 1.00 40.22 O
ATOM 2 P A B 427 54.560 113.356 31.226 1.00 42.88 P
ATOM 3 OP1 A B 427 53.865 112.541 32.254 1.00 45.14 O
ATOM 4 OP2 A B 427 53.794 114.365 30.453 1.00 41.37 O
ATOM 5 O5' A B 427 55.787 114.106 31.910 1.00 42.87 O
ATOM 6 C5' A B 427 56.613 113.449 32.888 1.00 38.26 C
ATOM 7 C4' A B 427 57.628 114.419 33.442 1.00 37.61 C
ATOM 8 O4' A B 427 58.541 114.822 32.385 1.00 38.92 O
ATOM 9 C3' A B 427 57.061 115.729 33.959 1.00 35.83 C
ATOM 10 O3' A B 427 56.566 115.599 35.276 1.00 33.87 O
ATOM 11 C2' A B 427 58.266 116.652 33.866 1.00 36.87 C
ATOM 12 O2' A B 427 59.210 116.433 34.893 1.00 38.41 O
ATOM 13 C1' A B 427 58.885 116.189 32.546 1.00 37.97 C
ATOM 14 N9 A B 427 58.350 116.937 31.407 1.00 37.86 N
ATOM 15 C8 A B 427 57.337 116.569 30.552 1.00 37.32 C
ATOM 16 N7 A B 427 57.061 117.470 29.641 1.00 37.51 N
ATOM 17 C5 A B 427 57.956 118.498 29.906 1.00 37.45 C
ATOM 18 C6 A B 427 58.173 119.746 29.295 1.00 36.82 C
ATOM 19 N6 A B 427 57.479 120.189 28.247 1.00 36.02 N
ATOM 20 N1 A B 427 59.141 120.533 29.807 1.00 36.30 N
ATOM 21 C2 A B 427 59.839 120.088 30.859 1.00 35.55 C
ATOM 22 N3 A B 427 59.731 118.942 31.517 1.00 34.71 N
ATOM 23 C4 A B 427 58.760 118.181 30.987 1.00 37.42 C
ATOM 24 P C B 428 55.268 116.433 35.724 1.00 36.57 P
ATOM 25 OP1 C B 428 54.889 115.931 37.067 1.00 37.14 O
ATOM 26 OP2 C B 428 54.276 116.411 34.624 1.00 35.99 O
ATOM 27 O5' C B 428 55.787 117.931 35.897 1.00 37.56 O
TER
Atoms:
C2: (59.481,110.887,27.536)
OP1: (52.074,113.296,25.567)
OP2: (54.142,114.109,24.289)
C4: (60.317,111.162,25.380)
O5': (54.365,112.384,26.046)
C3': (55.157,112.545,28.815)
C1': (57.158,111.525,28.099)
O4': (56.111,110.666,27.695)
C5': (53.920,111.334,26.912)
P: (53.397,113.014,24.953)
O2: (59.622,110.552,28.724)
C4': (54.834,111.230,28.107)
C2': (56.527,112.906,28.250)
O2': (57.300,113.706,29.126)
N1: (58.255,111.431,27.117)
N3: (60.484,110.753,26.640)
N4: (61.348,111.021,24.545)
C6: (58.093,111.850,25.821)
C5: (59.091,111.737,24.928)
O3': (55.258,112.326,30.214)
OP1: (52.074,113.296,25.567)
OP2: (54.142,114.109,24.289)
C4: (60.317,111.162,25.380)
O5': (54.365,112.384,26.046)
C3': (55.157,112.545,28.815)
C1': (57.158,111.525,28.099)
O4': (56.111,110.666,27.695)
C5': (53.920,111.334,26.912)
P: (53.397,113.014,24.953)
O2: (59.622,110.552,28.724)
C4': (54.834,111.230,28.107)
C2': (56.527,112.906,28.250)
O2': (57.300,113.706,29.126)
N1: (58.255,111.431,27.117)
N3: (60.484,110.753,26.640)
N4: (61.348,111.021,24.545)
C6: (58.093,111.850,25.821)
C5: (59.091,111.737,24.928)
O3': (55.258,112.326,30.214)
OP1: (53.865,112.541,32.254)
OP2: (53.794,114.365,30.453)
C3': (57.061,115.729,33.959)
C1': (58.885,116.189,32.546)
C5': (56.613,113.449,32.888)
O4': (58.541,114.822,32.385)
C8: (57.337,116.569,30.552)
O2': (59.210,116.433,34.893)
C6: (58.173,119.746,29.295)
C5: (57.956,118.498,29.906)
C4: (58.760,118.181,30.987)
P: (54.560,113.356,31.226)
C4': (57.628,114.419,33.442)
C2': (58.266,116.652,33.866)
C2: (59.839,120.088,30.859)
N1: (59.141,120.533,29.807)
N3: (59.731,118.942,31.517)
N6: (57.479,120.189,28.247)
N7: (57.061,117.470,29.641)
N9: (58.350,116.937,31.407)
O5': (55.787,114.106,31.910)
O3': (56.566,115.599,35.276)
OP2: (53.794,114.365,30.453)
C3': (57.061,115.729,33.959)
C1': (58.885,116.189,32.546)
C5': (56.613,113.449,32.888)
O4': (58.541,114.822,32.385)
C8: (57.337,116.569,30.552)
O2': (59.210,116.433,34.893)
C6: (58.173,119.746,29.295)
C5: (57.956,118.498,29.906)
C4: (58.760,118.181,30.987)
P: (54.560,113.356,31.226)
C4': (57.628,114.419,33.442)
C2': (58.266,116.652,33.866)
C2: (59.839,120.088,30.859)
N1: (59.141,120.533,29.807)
N3: (59.731,118.942,31.517)
N6: (57.479,120.189,28.247)
N7: (57.061,117.470,29.641)
N9: (58.350,116.937,31.407)
O5': (55.787,114.106,31.910)
O3': (56.566,115.599,35.276)
Image (generated by PyMOL):