Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0426:0427
Extra
PDB:
ATOM 1 O3' A A 425 53.405 112.578 23.895 1.00 46.92 O
ATOM 2 P C A 426 53.576 113.814 24.898 1.00 47.21 P
ATOM 3 OP1 C A 426 52.252 114.141 25.491 1.00 46.34 O
ATOM 4 OP2 C A 426 54.324 114.861 24.156 1.00 47.93 O
ATOM 5 O5' C A 426 54.522 113.231 26.040 1.00 46.60 O
ATOM 6 C5' C A 426 54.083 112.153 26.879 1.00 45.18 C
ATOM 7 C4' C A 426 55.002 111.998 28.065 1.00 45.88 C
ATOM 8 O4' C A 426 56.249 111.385 27.637 1.00 47.54 O
ATOM 9 C3' C A 426 55.381 113.274 28.812 1.00 46.28 C
ATOM 10 O3' C A 426 55.433 113.034 30.209 1.00 44.12 O
ATOM 11 C2' C A 426 56.784 113.569 28.288 1.00 47.99 C
ATOM 12 O2' C A 426 57.588 114.292 29.198 1.00 48.86 O
ATOM 13 C1' C A 426 57.340 112.161 28.094 1.00 48.17 C
ATOM 14 N1 C A 426 58.428 112.078 27.100 1.00 48.60 N
ATOM 15 C2 C A 426 59.644 111.490 27.469 1.00 48.62 C
ATOM 16 O2 C A 426 59.781 111.054 28.618 1.00 48.02 O
ATOM 17 N3 C A 426 60.644 111.417 26.562 1.00 49.78 N
ATOM 18 C4 C A 426 60.474 111.913 25.336 1.00 49.67 C
ATOM 19 N4 C A 426 61.495 111.837 24.483 1.00 49.53 N
ATOM 20 C5 C A 426 59.250 112.514 24.931 1.00 50.48 C
ATOM 21 C6 C A 426 58.261 112.572 25.834 1.00 50.46 C
ATOM 22 P A A 427 54.692 114.041 31.214 1.00 44.97 P
ATOM 23 OP1 A A 427 54.013 113.207 32.233 1.00 46.04 O
ATOM 24 OP2 A A 427 53.904 115.035 30.441 1.00 43.25 O
ATOM 25 O5' A A 427 55.888 114.818 31.919 1.00 45.30 O
TER
ATOM 1 O3' C B 426 55.433 113.034 30.209 1.00 44.12 O
ATOM 2 P A B 427 54.692 114.041 31.214 1.00 44.97 P
ATOM 3 OP1 A B 427 54.013 113.207 32.233 1.00 46.04 O
ATOM 4 OP2 A B 427 53.904 115.035 30.441 1.00 43.25 O
ATOM 5 O5' A B 427 55.888 114.818 31.919 1.00 45.30 O
ATOM 6 C5' A B 427 56.793 114.143 32.808 1.00 44.38 C
ATOM 7 C4' A B 427 57.794 115.122 33.372 1.00 44.01 C
ATOM 8 O4' A B 427 58.704 115.553 32.324 1.00 44.74 O
ATOM 9 C3' A B 427 57.213 116.418 33.907 1.00 42.50 C
ATOM 10 O3' A B 427 56.681 116.280 35.211 1.00 42.37 O
ATOM 11 C2' A B 427 58.415 117.348 33.838 1.00 43.54 C
ATOM 12 O2' A B 427 59.374 117.101 34.844 1.00 41.83 O
ATOM 13 C1' A B 427 59.018 116.931 32.498 1.00 45.00 C
ATOM 14 N9 A B 427 58.426 117.681 31.387 1.00 46.82 N
ATOM 15 C8 A B 427 57.352 117.313 30.612 1.00 47.73 C
ATOM 16 N7 A B 427 57.032 118.191 29.696 1.00 47.96 N
ATOM 17 C5 A B 427 57.958 119.206 29.874 1.00 46.97 C
ATOM 18 C6 A B 427 58.154 120.416 29.209 1.00 46.31 C
ATOM 19 N6 A B 427 57.403 120.822 28.186 1.00 45.43 N
ATOM 20 N1 A B 427 59.164 121.206 29.630 1.00 47.55 N
ATOM 21 C2 A B 427 59.923 120.786 30.648 1.00 46.41 C
ATOM 22 N3 A B 427 59.841 119.663 31.351 1.00 46.45 N
ATOM 23 C4 A B 427 58.824 118.907 30.911 1.00 46.96 C
ATOM 24 P C B 428 55.446 117.204 35.661 1.00 43.69 P
ATOM 25 OP1 C B 428 55.100 116.838 37.056 1.00 43.40 O
ATOM 26 OP2 C B 428 54.405 117.145 34.609 1.00 44.05 O
ATOM 27 O5' C B 428 56.038 118.682 35.674 1.00 44.82 O
TER
ATOM 2 P C A 426 53.576 113.814 24.898 1.00 47.21 P
ATOM 3 OP1 C A 426 52.252 114.141 25.491 1.00 46.34 O
ATOM 4 OP2 C A 426 54.324 114.861 24.156 1.00 47.93 O
ATOM 5 O5' C A 426 54.522 113.231 26.040 1.00 46.60 O
ATOM 6 C5' C A 426 54.083 112.153 26.879 1.00 45.18 C
ATOM 7 C4' C A 426 55.002 111.998 28.065 1.00 45.88 C
ATOM 8 O4' C A 426 56.249 111.385 27.637 1.00 47.54 O
ATOM 9 C3' C A 426 55.381 113.274 28.812 1.00 46.28 C
ATOM 10 O3' C A 426 55.433 113.034 30.209 1.00 44.12 O
ATOM 11 C2' C A 426 56.784 113.569 28.288 1.00 47.99 C
ATOM 12 O2' C A 426 57.588 114.292 29.198 1.00 48.86 O
ATOM 13 C1' C A 426 57.340 112.161 28.094 1.00 48.17 C
ATOM 14 N1 C A 426 58.428 112.078 27.100 1.00 48.60 N
ATOM 15 C2 C A 426 59.644 111.490 27.469 1.00 48.62 C
ATOM 16 O2 C A 426 59.781 111.054 28.618 1.00 48.02 O
ATOM 17 N3 C A 426 60.644 111.417 26.562 1.00 49.78 N
ATOM 18 C4 C A 426 60.474 111.913 25.336 1.00 49.67 C
ATOM 19 N4 C A 426 61.495 111.837 24.483 1.00 49.53 N
ATOM 20 C5 C A 426 59.250 112.514 24.931 1.00 50.48 C
ATOM 21 C6 C A 426 58.261 112.572 25.834 1.00 50.46 C
ATOM 22 P A A 427 54.692 114.041 31.214 1.00 44.97 P
ATOM 23 OP1 A A 427 54.013 113.207 32.233 1.00 46.04 O
ATOM 24 OP2 A A 427 53.904 115.035 30.441 1.00 43.25 O
ATOM 25 O5' A A 427 55.888 114.818 31.919 1.00 45.30 O
TER
ATOM 1 O3' C B 426 55.433 113.034 30.209 1.00 44.12 O
ATOM 2 P A B 427 54.692 114.041 31.214 1.00 44.97 P
ATOM 3 OP1 A B 427 54.013 113.207 32.233 1.00 46.04 O
ATOM 4 OP2 A B 427 53.904 115.035 30.441 1.00 43.25 O
ATOM 5 O5' A B 427 55.888 114.818 31.919 1.00 45.30 O
ATOM 6 C5' A B 427 56.793 114.143 32.808 1.00 44.38 C
ATOM 7 C4' A B 427 57.794 115.122 33.372 1.00 44.01 C
ATOM 8 O4' A B 427 58.704 115.553 32.324 1.00 44.74 O
ATOM 9 C3' A B 427 57.213 116.418 33.907 1.00 42.50 C
ATOM 10 O3' A B 427 56.681 116.280 35.211 1.00 42.37 O
ATOM 11 C2' A B 427 58.415 117.348 33.838 1.00 43.54 C
ATOM 12 O2' A B 427 59.374 117.101 34.844 1.00 41.83 O
ATOM 13 C1' A B 427 59.018 116.931 32.498 1.00 45.00 C
ATOM 14 N9 A B 427 58.426 117.681 31.387 1.00 46.82 N
ATOM 15 C8 A B 427 57.352 117.313 30.612 1.00 47.73 C
ATOM 16 N7 A B 427 57.032 118.191 29.696 1.00 47.96 N
ATOM 17 C5 A B 427 57.958 119.206 29.874 1.00 46.97 C
ATOM 18 C6 A B 427 58.154 120.416 29.209 1.00 46.31 C
ATOM 19 N6 A B 427 57.403 120.822 28.186 1.00 45.43 N
ATOM 20 N1 A B 427 59.164 121.206 29.630 1.00 47.55 N
ATOM 21 C2 A B 427 59.923 120.786 30.648 1.00 46.41 C
ATOM 22 N3 A B 427 59.841 119.663 31.351 1.00 46.45 N
ATOM 23 C4 A B 427 58.824 118.907 30.911 1.00 46.96 C
ATOM 24 P C B 428 55.446 117.204 35.661 1.00 43.69 P
ATOM 25 OP1 C B 428 55.100 116.838 37.056 1.00 43.40 O
ATOM 26 OP2 C B 428 54.405 117.145 34.609 1.00 44.05 O
ATOM 27 O5' C B 428 56.038 118.682 35.674 1.00 44.82 O
TER
Atoms:
C2: (59.644,111.490,27.469)
OP1: (52.252,114.141,25.491)
OP2: (54.324,114.861,24.156)
C4: (60.474,111.913,25.336)
O5': (54.522,113.231,26.040)
C3': (55.381,113.274,28.812)
C1': (57.340,112.161,28.094)
O4': (56.249,111.385,27.637)
C5': (54.083,112.153,26.879)
P: (53.576,113.814,24.898)
O2: (59.781,111.054,28.618)
C4': (55.002,111.998,28.065)
C2': (56.784,113.569,28.288)
O2': (57.588,114.292,29.198)
N1: (58.428,112.078,27.100)
N3: (60.644,111.417,26.562)
N4: (61.495,111.837,24.483)
C6: (58.261,112.572,25.834)
C5: (59.250,112.514,24.931)
O3': (55.433,113.034,30.209)
OP1: (52.252,114.141,25.491)
OP2: (54.324,114.861,24.156)
C4: (60.474,111.913,25.336)
O5': (54.522,113.231,26.040)
C3': (55.381,113.274,28.812)
C1': (57.340,112.161,28.094)
O4': (56.249,111.385,27.637)
C5': (54.083,112.153,26.879)
P: (53.576,113.814,24.898)
O2: (59.781,111.054,28.618)
C4': (55.002,111.998,28.065)
C2': (56.784,113.569,28.288)
O2': (57.588,114.292,29.198)
N1: (58.428,112.078,27.100)
N3: (60.644,111.417,26.562)
N4: (61.495,111.837,24.483)
C6: (58.261,112.572,25.834)
C5: (59.250,112.514,24.931)
O3': (55.433,113.034,30.209)
OP1: (54.013,113.207,32.233)
OP2: (53.904,115.035,30.441)
C3': (57.213,116.418,33.907)
C1': (59.018,116.931,32.498)
C5': (56.793,114.143,32.808)
O4': (58.704,115.553,32.324)
C8: (57.352,117.313,30.612)
O2': (59.374,117.101,34.844)
C6: (58.154,120.416,29.209)
C5: (57.958,119.206,29.874)
C4: (58.824,118.907,30.911)
P: (54.692,114.041,31.214)
C4': (57.794,115.122,33.372)
C2': (58.415,117.348,33.838)
C2: (59.923,120.786,30.648)
N1: (59.164,121.206,29.630)
N3: (59.841,119.663,31.351)
N6: (57.403,120.822,28.186)
N7: (57.032,118.191,29.696)
N9: (58.426,117.681,31.387)
O5': (55.888,114.818,31.919)
O3': (56.681,116.280,35.211)
OP2: (53.904,115.035,30.441)
C3': (57.213,116.418,33.907)
C1': (59.018,116.931,32.498)
C5': (56.793,114.143,32.808)
O4': (58.704,115.553,32.324)
C8: (57.352,117.313,30.612)
O2': (59.374,117.101,34.844)
C6: (58.154,120.416,29.209)
C5: (57.958,119.206,29.874)
C4: (58.824,118.907,30.911)
P: (54.692,114.041,31.214)
C4': (57.794,115.122,33.372)
C2': (58.415,117.348,33.838)
C2: (59.923,120.786,30.648)
N1: (59.164,121.206,29.630)
N3: (59.841,119.663,31.351)
N6: (57.403,120.822,28.186)
N7: (57.032,118.191,29.696)
N9: (58.426,117.681,31.387)
O5': (55.888,114.818,31.919)
O3': (56.681,116.280,35.211)
Image (generated by PyMOL):