Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0426:0427
Extra
PDB:
ATOM 1 O3' A A 425 53.219 112.395 23.984 1.00 40.98 O
ATOM 2 P C A 426 53.348 113.646 24.981 1.00 41.47 P
ATOM 3 OP1 C A 426 51.997 113.917 25.526 1.00 40.97 O
ATOM 4 OP2 C A 426 54.085 114.731 24.290 1.00 43.11 O
ATOM 5 O5' C A 426 54.293 113.095 26.139 1.00 41.88 O
ATOM 6 C5' C A 426 53.866 112.027 26.996 1.00 40.81 C
ATOM 7 C4' C A 426 54.810 111.882 28.164 1.00 40.60 C
ATOM 8 O4' C A 426 56.055 111.277 27.718 1.00 42.27 O
ATOM 9 C3' C A 426 55.194 113.170 28.883 1.00 41.21 C
ATOM 10 O3' C A 426 55.300 112.928 30.273 1.00 39.87 O
ATOM 11 C2' C A 426 56.572 113.483 28.308 1.00 43.00 C
ATOM 12 O2' C A 426 57.378 114.238 29.194 1.00 46.16 O
ATOM 13 C1' C A 426 57.146 112.081 28.118 1.00 42.07 C
ATOM 14 N1 C A 426 58.205 111.977 27.097 1.00 41.31 N
ATOM 15 C2 C A 426 59.463 111.494 27.474 1.00 41.88 C
ATOM 16 O2 C A 426 59.658 111.180 28.652 1.00 42.65 O
ATOM 17 N3 C A 426 60.436 111.385 26.544 1.00 42.25 N
ATOM 18 C4 C A 426 60.198 111.744 25.283 1.00 41.71 C
ATOM 19 N4 C A 426 61.187 111.620 24.402 1.00 42.37 N
ATOM 20 C5 C A 426 58.933 112.246 24.871 1.00 41.71 C
ATOM 21 C6 C A 426 57.973 112.344 25.800 1.00 41.82 C
ATOM 22 P A A 427 54.559 113.908 31.306 1.00 41.88 P
ATOM 23 OP1 A A 427 53.934 113.029 32.338 1.00 41.04 O
ATOM 24 OP2 A A 427 53.713 114.888 30.562 1.00 40.11 O
ATOM 25 O5' A A 427 55.753 114.716 31.981 1.00 40.44 O
TER
ATOM 1 O3' C B 426 55.300 112.928 30.273 1.00 39.87 O
ATOM 2 P A B 427 54.559 113.908 31.306 1.00 41.88 P
ATOM 3 OP1 A B 427 53.934 113.029 32.338 1.00 41.04 O
ATOM 4 OP2 A B 427 53.713 114.888 30.562 1.00 40.11 O
ATOM 5 O5' A B 427 55.753 114.716 31.981 1.00 40.44 O
ATOM 6 C5' A B 427 56.655 114.070 32.890 1.00 38.52 C
ATOM 7 C4' A B 427 57.635 115.065 33.442 1.00 35.90 C
ATOM 8 O4' A B 427 58.556 115.481 32.402 1.00 37.77 O
ATOM 9 C3' A B 427 57.010 116.355 33.916 1.00 35.58 C
ATOM 10 O3' A B 427 56.462 116.216 35.210 1.00 34.52 O
ATOM 11 C2' A B 427 58.186 117.315 33.851 1.00 37.88 C
ATOM 12 O2' A B 427 59.085 117.154 34.928 1.00 38.26 O
ATOM 13 C1' A B 427 58.862 116.858 32.557 1.00 38.60 C
ATOM 14 N9 A B 427 58.339 117.575 31.393 1.00 41.08 N
ATOM 15 C8 A B 427 57.358 117.159 30.523 1.00 41.95 C
ATOM 16 N7 A B 427 57.066 118.036 29.595 1.00 42.62 N
ATOM 17 C5 A B 427 57.915 119.101 29.863 1.00 41.83 C
ATOM 18 C6 A B 427 58.090 120.346 29.241 1.00 41.38 C
ATOM 19 N6 A B 427 57.384 120.756 28.185 1.00 39.59 N
ATOM 20 N1 A B 427 59.028 121.171 29.750 1.00 42.70 N
ATOM 21 C2 A B 427 59.733 120.765 30.814 1.00 41.66 C
ATOM 22 N3 A B 427 59.656 119.626 31.489 1.00 41.64 N
ATOM 23 C4 A B 427 58.715 118.826 30.959 1.00 41.63 C
ATOM 24 P C B 428 55.203 117.116 35.637 1.00 35.14 P
ATOM 25 OP1 C B 428 54.806 116.662 36.988 1.00 35.79 O
ATOM 26 OP2 C B 428 54.208 117.115 34.531 1.00 33.73 O
ATOM 27 O5' C B 428 55.792 118.590 35.779 1.00 36.98 O
TER
ATOM 2 P C A 426 53.348 113.646 24.981 1.00 41.47 P
ATOM 3 OP1 C A 426 51.997 113.917 25.526 1.00 40.97 O
ATOM 4 OP2 C A 426 54.085 114.731 24.290 1.00 43.11 O
ATOM 5 O5' C A 426 54.293 113.095 26.139 1.00 41.88 O
ATOM 6 C5' C A 426 53.866 112.027 26.996 1.00 40.81 C
ATOM 7 C4' C A 426 54.810 111.882 28.164 1.00 40.60 C
ATOM 8 O4' C A 426 56.055 111.277 27.718 1.00 42.27 O
ATOM 9 C3' C A 426 55.194 113.170 28.883 1.00 41.21 C
ATOM 10 O3' C A 426 55.300 112.928 30.273 1.00 39.87 O
ATOM 11 C2' C A 426 56.572 113.483 28.308 1.00 43.00 C
ATOM 12 O2' C A 426 57.378 114.238 29.194 1.00 46.16 O
ATOM 13 C1' C A 426 57.146 112.081 28.118 1.00 42.07 C
ATOM 14 N1 C A 426 58.205 111.977 27.097 1.00 41.31 N
ATOM 15 C2 C A 426 59.463 111.494 27.474 1.00 41.88 C
ATOM 16 O2 C A 426 59.658 111.180 28.652 1.00 42.65 O
ATOM 17 N3 C A 426 60.436 111.385 26.544 1.00 42.25 N
ATOM 18 C4 C A 426 60.198 111.744 25.283 1.00 41.71 C
ATOM 19 N4 C A 426 61.187 111.620 24.402 1.00 42.37 N
ATOM 20 C5 C A 426 58.933 112.246 24.871 1.00 41.71 C
ATOM 21 C6 C A 426 57.973 112.344 25.800 1.00 41.82 C
ATOM 22 P A A 427 54.559 113.908 31.306 1.00 41.88 P
ATOM 23 OP1 A A 427 53.934 113.029 32.338 1.00 41.04 O
ATOM 24 OP2 A A 427 53.713 114.888 30.562 1.00 40.11 O
ATOM 25 O5' A A 427 55.753 114.716 31.981 1.00 40.44 O
TER
ATOM 1 O3' C B 426 55.300 112.928 30.273 1.00 39.87 O
ATOM 2 P A B 427 54.559 113.908 31.306 1.00 41.88 P
ATOM 3 OP1 A B 427 53.934 113.029 32.338 1.00 41.04 O
ATOM 4 OP2 A B 427 53.713 114.888 30.562 1.00 40.11 O
ATOM 5 O5' A B 427 55.753 114.716 31.981 1.00 40.44 O
ATOM 6 C5' A B 427 56.655 114.070 32.890 1.00 38.52 C
ATOM 7 C4' A B 427 57.635 115.065 33.442 1.00 35.90 C
ATOM 8 O4' A B 427 58.556 115.481 32.402 1.00 37.77 O
ATOM 9 C3' A B 427 57.010 116.355 33.916 1.00 35.58 C
ATOM 10 O3' A B 427 56.462 116.216 35.210 1.00 34.52 O
ATOM 11 C2' A B 427 58.186 117.315 33.851 1.00 37.88 C
ATOM 12 O2' A B 427 59.085 117.154 34.928 1.00 38.26 O
ATOM 13 C1' A B 427 58.862 116.858 32.557 1.00 38.60 C
ATOM 14 N9 A B 427 58.339 117.575 31.393 1.00 41.08 N
ATOM 15 C8 A B 427 57.358 117.159 30.523 1.00 41.95 C
ATOM 16 N7 A B 427 57.066 118.036 29.595 1.00 42.62 N
ATOM 17 C5 A B 427 57.915 119.101 29.863 1.00 41.83 C
ATOM 18 C6 A B 427 58.090 120.346 29.241 1.00 41.38 C
ATOM 19 N6 A B 427 57.384 120.756 28.185 1.00 39.59 N
ATOM 20 N1 A B 427 59.028 121.171 29.750 1.00 42.70 N
ATOM 21 C2 A B 427 59.733 120.765 30.814 1.00 41.66 C
ATOM 22 N3 A B 427 59.656 119.626 31.489 1.00 41.64 N
ATOM 23 C4 A B 427 58.715 118.826 30.959 1.00 41.63 C
ATOM 24 P C B 428 55.203 117.116 35.637 1.00 35.14 P
ATOM 25 OP1 C B 428 54.806 116.662 36.988 1.00 35.79 O
ATOM 26 OP2 C B 428 54.208 117.115 34.531 1.00 33.73 O
ATOM 27 O5' C B 428 55.792 118.590 35.779 1.00 36.98 O
TER
Atoms:
C2: (59.463,111.494,27.474)
OP1: (51.997,113.917,25.526)
OP2: (54.085,114.731,24.290)
C4: (60.198,111.744,25.283)
O5': (54.293,113.095,26.139)
C3': (55.194,113.170,28.883)
C1': (57.146,112.081,28.118)
O4': (56.055,111.277,27.718)
C5': (53.866,112.027,26.996)
P: (53.348,113.646,24.981)
O2: (59.658,111.180,28.652)
C4': (54.810,111.882,28.164)
C2': (56.572,113.483,28.308)
O2': (57.378,114.238,29.194)
N1: (58.205,111.977,27.097)
N3: (60.436,111.385,26.544)
N4: (61.187,111.620,24.402)
C6: (57.973,112.344,25.800)
C5: (58.933,112.246,24.871)
O3': (55.300,112.928,30.273)
OP1: (51.997,113.917,25.526)
OP2: (54.085,114.731,24.290)
C4: (60.198,111.744,25.283)
O5': (54.293,113.095,26.139)
C3': (55.194,113.170,28.883)
C1': (57.146,112.081,28.118)
O4': (56.055,111.277,27.718)
C5': (53.866,112.027,26.996)
P: (53.348,113.646,24.981)
O2: (59.658,111.180,28.652)
C4': (54.810,111.882,28.164)
C2': (56.572,113.483,28.308)
O2': (57.378,114.238,29.194)
N1: (58.205,111.977,27.097)
N3: (60.436,111.385,26.544)
N4: (61.187,111.620,24.402)
C6: (57.973,112.344,25.800)
C5: (58.933,112.246,24.871)
O3': (55.300,112.928,30.273)
OP1: (53.934,113.029,32.338)
OP2: (53.713,114.888,30.562)
C3': (57.010,116.355,33.916)
C1': (58.862,116.858,32.557)
C5': (56.655,114.070,32.890)
O4': (58.556,115.481,32.402)
C8: (57.358,117.159,30.523)
O2': (59.085,117.154,34.928)
C6: (58.090,120.346,29.241)
C5: (57.915,119.101,29.863)
C4: (58.715,118.826,30.959)
P: (54.559,113.908,31.306)
C4': (57.635,115.065,33.442)
C2': (58.186,117.315,33.851)
C2: (59.733,120.765,30.814)
N1: (59.028,121.171,29.750)
N3: (59.656,119.626,31.489)
N6: (57.384,120.756,28.185)
N7: (57.066,118.036,29.595)
N9: (58.339,117.575,31.393)
O5': (55.753,114.716,31.981)
O3': (56.462,116.216,35.210)
OP2: (53.713,114.888,30.562)
C3': (57.010,116.355,33.916)
C1': (58.862,116.858,32.557)
C5': (56.655,114.070,32.890)
O4': (58.556,115.481,32.402)
C8: (57.358,117.159,30.523)
O2': (59.085,117.154,34.928)
C6: (58.090,120.346,29.241)
C5: (57.915,119.101,29.863)
C4: (58.715,118.826,30.959)
P: (54.559,113.908,31.306)
C4': (57.635,115.065,33.442)
C2': (58.186,117.315,33.851)
C2: (59.733,120.765,30.814)
N1: (59.028,121.171,29.750)
N3: (59.656,119.626,31.489)
N6: (57.384,120.756,28.185)
N7: (57.066,118.036,29.595)
N9: (58.339,117.575,31.393)
O5': (55.753,114.716,31.981)
O3': (56.462,116.216,35.210)
Image (generated by PyMOL):