Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2438:A2442
Extra
PDB:
ATOM 1 O3' G A2437 -74.785 -63.885 22.764 1.00 0.01 O
ATOM 2 P G A2438 -75.038 -64.869 21.579 1.00 0.01 P
ATOM 3 OP1 G A2438 -75.326 -66.135 22.151 1.00 0.01 O
ATOM 4 OP2 G A2438 -73.907 -64.749 20.658 1.00 0.01 O
ATOM 5 O5' G A2438 -76.338 -64.269 20.939 1.00 0.01 O
ATOM 6 C5' G A2438 -77.185 -65.047 20.141 1.00 0.01 C
ATOM 7 C4' G A2438 -78.555 -64.453 20.070 1.00 0.01 C
ATOM 8 O4' G A2438 -78.485 -63.032 20.207 1.00 0.01 O
ATOM 9 C3' G A2438 -79.284 -64.601 18.767 1.00 0.01 C
ATOM 10 O3' G A2438 -79.748 -65.897 18.531 1.00 0.01 O
ATOM 11 C2' G A2438 -80.377 -63.577 18.926 1.00 0.01 C
ATOM 12 O2' G A2438 -81.346 -64.025 19.841 1.00 0.01 O
ATOM 13 C1' G A2438 -79.608 -62.461 19.584 1.00 0.01 C
ATOM 14 N9 G A2438 -79.170 -61.461 18.619 1.00 0.01 N
ATOM 15 C8 G A2438 -77.913 -61.068 18.278 1.00 0.01 C
ATOM 16 N7 G A2438 -77.927 -60.118 17.377 1.00 0.01 N
ATOM 17 C5 G A2438 -79.268 -59.881 17.145 1.00 0.01 C
ATOM 18 C6 G A2438 -79.910 -58.979 16.299 1.00 0.01 C
ATOM 19 O6 G A2438 -79.362 -58.180 15.558 1.00 0.01 O
ATOM 20 N1 G A2438 -81.296 -59.062 16.342 1.00 0.01 N
ATOM 21 C2 G A2438 -82.002 -59.915 17.129 1.00 0.01 C
ATOM 22 N2 G A2438 -83.337 -59.877 17.076 1.00 0.01 N
ATOM 23 N3 G A2438 -81.400 -60.767 17.931 1.00 0.01 N
ATOM 24 C4 G A2438 -80.046 -60.699 17.892 1.00 0.01 C
ATOM 25 P G A2439 -79.640 -66.484 17.076 1.00 0.01 P
ATOM 26 OP1 G A2439 -79.740 -67.933 17.162 1.00 0.01 O
ATOM 27 OP2 G A2439 -78.460 -65.923 16.485 1.00 0.01 O
ATOM 28 O5' G A2439 -80.905 -65.883 16.380 1.00 0.01 O
TER
ATOM 1 O3' A B2441 -90.403 -63.491 12.927 1.00 0.01 O
ATOM 2 P U B2442 -91.096 -63.255 11.498 1.00 0.01 P
ATOM 3 OP1 U B2442 -92.445 -63.853 11.536 1.00 0.01 O
ATOM 4 OP2 U B2442 -90.154 -63.723 10.482 1.00 0.01 O
ATOM 5 O5' U B2442 -91.202 -61.680 11.456 1.00 0.01 O
ATOM 6 C5' U B2442 -91.375 -60.985 10.245 1.00 0.01 C
ATOM 7 C4' U B2442 -90.242 -60.027 9.978 1.00 0.01 C
ATOM 8 O4' U B2442 -89.820 -59.397 11.218 1.00 0.01 O
ATOM 9 C3' U B2442 -88.994 -60.653 9.376 1.00 0.01 C
ATOM 10 O3' U B2442 -88.472 -59.806 8.369 1.00 0.01 O
ATOM 11 C2' U B2442 -88.040 -60.691 10.544 1.00 0.01 C
ATOM 12 O2' U B2442 -86.695 -60.681 10.185 1.00 0.01 O
ATOM 13 C1' U B2442 -88.422 -59.437 11.283 1.00 0.01 C
ATOM 14 N1 U B2442 -88.007 -59.425 12.693 1.00 0.01 N
ATOM 15 C2 U B2442 -86.736 -59.040 13.012 1.00 0.01 C
ATOM 16 O2 U B2442 -85.937 -58.699 12.181 1.00 0.01 O
ATOM 17 N3 U B2442 -86.424 -59.053 14.332 1.00 0.01 N
ATOM 18 C4 U B2442 -87.229 -59.410 15.375 1.00 0.01 C
ATOM 19 O4 U B2442 -86.841 -59.373 16.537 1.00 0.01 O
ATOM 20 C5 U B2442 -88.521 -59.797 14.982 1.00 0.01 C
ATOM 21 C6 U B2442 -88.853 -59.779 13.689 1.00 0.01 C
ATOM 22 P A B2443 -89.041 -59.877 6.881 1.00 0.01 P
ATOM 23 OP1 A B2443 -90.480 -59.881 6.971 1.00 0.01 O
ATOM 24 OP2 A B2443 -88.373 -60.989 6.209 1.00 0.01 O
ATOM 25 O5' A B2443 -88.558 -58.519 6.258 1.00 0.01 O
TER
ATOM 2 P G A2438 -75.038 -64.869 21.579 1.00 0.01 P
ATOM 3 OP1 G A2438 -75.326 -66.135 22.151 1.00 0.01 O
ATOM 4 OP2 G A2438 -73.907 -64.749 20.658 1.00 0.01 O
ATOM 5 O5' G A2438 -76.338 -64.269 20.939 1.00 0.01 O
ATOM 6 C5' G A2438 -77.185 -65.047 20.141 1.00 0.01 C
ATOM 7 C4' G A2438 -78.555 -64.453 20.070 1.00 0.01 C
ATOM 8 O4' G A2438 -78.485 -63.032 20.207 1.00 0.01 O
ATOM 9 C3' G A2438 -79.284 -64.601 18.767 1.00 0.01 C
ATOM 10 O3' G A2438 -79.748 -65.897 18.531 1.00 0.01 O
ATOM 11 C2' G A2438 -80.377 -63.577 18.926 1.00 0.01 C
ATOM 12 O2' G A2438 -81.346 -64.025 19.841 1.00 0.01 O
ATOM 13 C1' G A2438 -79.608 -62.461 19.584 1.00 0.01 C
ATOM 14 N9 G A2438 -79.170 -61.461 18.619 1.00 0.01 N
ATOM 15 C8 G A2438 -77.913 -61.068 18.278 1.00 0.01 C
ATOM 16 N7 G A2438 -77.927 -60.118 17.377 1.00 0.01 N
ATOM 17 C5 G A2438 -79.268 -59.881 17.145 1.00 0.01 C
ATOM 18 C6 G A2438 -79.910 -58.979 16.299 1.00 0.01 C
ATOM 19 O6 G A2438 -79.362 -58.180 15.558 1.00 0.01 O
ATOM 20 N1 G A2438 -81.296 -59.062 16.342 1.00 0.01 N
ATOM 21 C2 G A2438 -82.002 -59.915 17.129 1.00 0.01 C
ATOM 22 N2 G A2438 -83.337 -59.877 17.076 1.00 0.01 N
ATOM 23 N3 G A2438 -81.400 -60.767 17.931 1.00 0.01 N
ATOM 24 C4 G A2438 -80.046 -60.699 17.892 1.00 0.01 C
ATOM 25 P G A2439 -79.640 -66.484 17.076 1.00 0.01 P
ATOM 26 OP1 G A2439 -79.740 -67.933 17.162 1.00 0.01 O
ATOM 27 OP2 G A2439 -78.460 -65.923 16.485 1.00 0.01 O
ATOM 28 O5' G A2439 -80.905 -65.883 16.380 1.00 0.01 O
TER
ATOM 1 O3' A B2441 -90.403 -63.491 12.927 1.00 0.01 O
ATOM 2 P U B2442 -91.096 -63.255 11.498 1.00 0.01 P
ATOM 3 OP1 U B2442 -92.445 -63.853 11.536 1.00 0.01 O
ATOM 4 OP2 U B2442 -90.154 -63.723 10.482 1.00 0.01 O
ATOM 5 O5' U B2442 -91.202 -61.680 11.456 1.00 0.01 O
ATOM 6 C5' U B2442 -91.375 -60.985 10.245 1.00 0.01 C
ATOM 7 C4' U B2442 -90.242 -60.027 9.978 1.00 0.01 C
ATOM 8 O4' U B2442 -89.820 -59.397 11.218 1.00 0.01 O
ATOM 9 C3' U B2442 -88.994 -60.653 9.376 1.00 0.01 C
ATOM 10 O3' U B2442 -88.472 -59.806 8.369 1.00 0.01 O
ATOM 11 C2' U B2442 -88.040 -60.691 10.544 1.00 0.01 C
ATOM 12 O2' U B2442 -86.695 -60.681 10.185 1.00 0.01 O
ATOM 13 C1' U B2442 -88.422 -59.437 11.283 1.00 0.01 C
ATOM 14 N1 U B2442 -88.007 -59.425 12.693 1.00 0.01 N
ATOM 15 C2 U B2442 -86.736 -59.040 13.012 1.00 0.01 C
ATOM 16 O2 U B2442 -85.937 -58.699 12.181 1.00 0.01 O
ATOM 17 N3 U B2442 -86.424 -59.053 14.332 1.00 0.01 N
ATOM 18 C4 U B2442 -87.229 -59.410 15.375 1.00 0.01 C
ATOM 19 O4 U B2442 -86.841 -59.373 16.537 1.00 0.01 O
ATOM 20 C5 U B2442 -88.521 -59.797 14.982 1.00 0.01 C
ATOM 21 C6 U B2442 -88.853 -59.779 13.689 1.00 0.01 C
ATOM 22 P A B2443 -89.041 -59.877 6.881 1.00 0.01 P
ATOM 23 OP1 A B2443 -90.480 -59.881 6.971 1.00 0.01 O
ATOM 24 OP2 A B2443 -88.373 -60.989 6.209 1.00 0.01 O
ATOM 25 O5' A B2443 -88.558 -58.519 6.258 1.00 0.01 O
TER
Atoms:
OP1: (-75.326,-66.135,22.151)
OP2: (-73.907,-64.749,20.658)
C3': (-79.284,-64.601,18.767)
C1': (-79.608,-62.461,19.584)
C5': (-77.185,-65.047,20.141)
O6: (-79.362,-58.180,15.558)
O4': (-78.485,-63.032,20.207)
C8: (-77.913,-61.068,18.278)
C2: (-82.002,-59.915,17.129)
C6: (-79.910,-58.979,16.299)
C5: (-79.268,-59.881,17.145)
C4: (-80.046,-60.699,17.892)
P: (-75.038,-64.869,21.579)
C4': (-78.555,-64.453,20.070)
C2': (-80.377,-63.577,18.926)
O2': (-81.346,-64.025,19.841)
N1: (-81.296,-59.062,16.342)
N2: (-83.337,-59.877,17.076)
N3: (-81.400,-60.767,17.931)
N7: (-77.927,-60.118,17.377)
N9: (-79.170,-61.461,18.619)
O5': (-76.338,-64.269,20.939)
O3': (-79.748,-65.897,18.531)
OP2: (-73.907,-64.749,20.658)
C3': (-79.284,-64.601,18.767)
C1': (-79.608,-62.461,19.584)
C5': (-77.185,-65.047,20.141)
O6: (-79.362,-58.180,15.558)
O4': (-78.485,-63.032,20.207)
C8: (-77.913,-61.068,18.278)
C2: (-82.002,-59.915,17.129)
C6: (-79.910,-58.979,16.299)
C5: (-79.268,-59.881,17.145)
C4: (-80.046,-60.699,17.892)
P: (-75.038,-64.869,21.579)
C4': (-78.555,-64.453,20.070)
C2': (-80.377,-63.577,18.926)
O2': (-81.346,-64.025,19.841)
N1: (-81.296,-59.062,16.342)
N2: (-83.337,-59.877,17.076)
N3: (-81.400,-60.767,17.931)
N7: (-77.927,-60.118,17.377)
N9: (-79.170,-61.461,18.619)
O5': (-76.338,-64.269,20.939)
O3': (-79.748,-65.897,18.531)
C4: (-87.229,-59.410,15.375)
N3: (-86.424,-59.053,14.332)
OP1: (-92.445,-63.853,11.536)
OP2: (-90.154,-63.723,10.482)
C2: (-86.736,-59.040,13.012)
C1': (-88.422,-59.437,11.283)
C3': (-88.994,-60.653,9.376)
O5': (-91.202,-61.680,11.456)
O4': (-89.820,-59.397,11.218)
C5': (-91.375,-60.985,10.245)
P: (-91.096,-63.255,11.498)
C4': (-90.242,-60.027,9.978)
C2': (-88.040,-60.691,10.544)
O2': (-86.695,-60.681,10.185)
N1: (-88.007,-59.425,12.693)
O4: (-86.841,-59.373,16.537)
O2: (-85.937,-58.699,12.181)
C6: (-88.853,-59.779,13.689)
C5: (-88.521,-59.797,14.982)
O3': (-88.472,-59.806,8.369)
N3: (-86.424,-59.053,14.332)
OP1: (-92.445,-63.853,11.536)
OP2: (-90.154,-63.723,10.482)
C2: (-86.736,-59.040,13.012)
C1': (-88.422,-59.437,11.283)
C3': (-88.994,-60.653,9.376)
O5': (-91.202,-61.680,11.456)
O4': (-89.820,-59.397,11.218)
C5': (-91.375,-60.985,10.245)
P: (-91.096,-63.255,11.498)
C4': (-90.242,-60.027,9.978)
C2': (-88.040,-60.691,10.544)
O2': (-86.695,-60.681,10.185)
N1: (-88.007,-59.425,12.693)
O4: (-86.841,-59.373,16.537)
O2: (-85.937,-58.699,12.181)
C6: (-88.853,-59.779,13.689)
C5: (-88.521,-59.797,14.982)
O3': (-88.472,-59.806,8.369)
Image (generated by PyMOL):