Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2481:A2484
Extra
PDB:
ATOM 1 O3' G A2480 -105.427 -67.881 -20.061 1.00 0.01 O
ATOM 2 P G A2481 -104.181 -68.138 -19.097 1.00 0.01 P
ATOM 3 OP1 G A2481 -104.087 -69.563 -18.868 1.00 0.01 O
ATOM 4 OP2 G A2481 -104.322 -67.260 -17.960 1.00 0.01 O
ATOM 5 O5' G A2481 -102.987 -67.704 -19.983 1.00 0.01 O
ATOM 6 C5' G A2481 -102.513 -68.580 -20.956 1.00 0.01 C
ATOM 7 C4' G A2481 -101.442 -67.942 -21.751 1.00 0.01 C
ATOM 8 O4' G A2481 -101.880 -66.655 -22.169 1.00 0.01 O
ATOM 9 C3' G A2481 -100.178 -67.658 -21.001 1.00 0.01 C
ATOM 10 O3' G A2481 -99.359 -68.778 -20.895 1.00 0.01 O
ATOM 11 C2' G A2481 -99.569 -66.548 -21.804 1.00 0.01 C
ATOM 12 O2' G A2481 -99.019 -67.058 -23.014 1.00 0.01 O
ATOM 13 C1' G A2481 -100.805 -65.756 -22.143 1.00 0.01 C
ATOM 14 N9 G A2481 -101.113 -64.693 -21.166 1.00 0.01 N
ATOM 15 C8 G A2481 -102.232 -64.655 -20.386 1.00 0.01 C
ATOM 16 N7 G A2481 -102.347 -63.585 -19.671 1.00 0.01 N
ATOM 17 C5 G A2481 -101.256 -62.843 -20.044 1.00 0.01 C
ATOM 18 C6 G A2481 -100.854 -61.573 -19.589 1.00 0.01 C
ATOM 19 O6 G A2481 -101.451 -60.892 -18.747 1.00 0.01 O
ATOM 20 N1 G A2481 -99.662 -61.167 -20.190 1.00 0.01 N
ATOM 21 C2 G A2481 -98.969 -61.907 -21.123 1.00 0.01 C
ATOM 22 N2 G A2481 -97.838 -61.418 -21.652 1.00 0.01 N
ATOM 23 N3 G A2481 -99.364 -63.088 -21.536 1.00 0.01 N
ATOM 24 C4 G A2481 -100.496 -63.499 -20.964 1.00 0.01 C
ATOM 25 P U A2482 -98.620 -69.062 -19.535 1.00 0.01 P
ATOM 26 OP1 U A2482 -98.151 -70.478 -19.609 1.00 0.01 O
ATOM 27 OP2 U A2482 -99.533 -68.651 -18.439 1.00 0.01 O
ATOM 28 O5' U A2482 -97.399 -68.059 -19.597 1.00 0.01 O
TER
ATOM 1 O3' G B2483 -90.358 -63.576 -15.154 1.00 0.01 O
ATOM 2 P U B2484 -88.935 -63.194 -15.722 1.00 8.27 P
ATOM 3 OP1 U B2484 -88.395 -64.382 -16.391 1.00 8.27 O
ATOM 4 OP2 U B2484 -88.186 -62.616 -14.611 1.00 8.27 O
ATOM 5 O5' U B2484 -89.284 -62.081 -16.785 1.00 8.27 O
ATOM 6 C5' U B2484 -88.372 -61.030 -17.078 1.00 8.27 C
ATOM 7 C4' U B2484 -88.974 -59.677 -16.796 1.00 8.27 C
ATOM 8 O4' U B2484 -89.815 -59.276 -17.923 1.00 8.27 O
ATOM 9 C3' U B2484 -89.877 -59.644 -15.581 1.00 8.27 C
ATOM 10 O3' U B2484 -89.875 -58.321 -15.035 1.00 8.27 O
ATOM 11 C2' U B2484 -91.238 -59.983 -16.201 1.00 8.27 C
ATOM 12 O2' U B2484 -92.379 -59.668 -15.412 1.00 8.27 O
ATOM 13 C1' U B2484 -91.160 -59.159 -17.479 1.00 8.27 C
ATOM 14 N1 U B2484 -92.066 -59.604 -18.569 1.00 9.71 N
ATOM 15 C2 U B2484 -93.382 -59.073 -18.627 1.00 9.71 C
ATOM 16 O2 U B2484 -93.868 -58.282 -17.807 1.00 9.71 O
ATOM 17 N3 U B2484 -94.147 -59.510 -19.692 1.00 9.71 N
ATOM 18 C4 U B2484 -93.750 -60.382 -20.699 1.00 9.71 C
ATOM 19 O4 U B2484 -94.535 -60.686 -21.617 1.00 9.71 O
ATOM 20 C5 U B2484 -92.389 -60.865 -20.573 1.00 9.71 C
ATOM 21 C6 U B2484 -91.604 -60.472 -19.545 1.00 9.71 C
ATOM 22 P U B2485 -89.260 -58.059 -13.570 1.00 0.01 P
ATOM 23 OP1 U B2485 -87.779 -58.202 -13.678 1.00 0.01 O
ATOM 24 OP2 U B2485 -90.007 -58.935 -12.600 1.00 0.01 O
ATOM 25 O5' U B2485 -89.641 -56.548 -13.304 1.00 0.01 O
TER
ATOM 2 P G A2481 -104.181 -68.138 -19.097 1.00 0.01 P
ATOM 3 OP1 G A2481 -104.087 -69.563 -18.868 1.00 0.01 O
ATOM 4 OP2 G A2481 -104.322 -67.260 -17.960 1.00 0.01 O
ATOM 5 O5' G A2481 -102.987 -67.704 -19.983 1.00 0.01 O
ATOM 6 C5' G A2481 -102.513 -68.580 -20.956 1.00 0.01 C
ATOM 7 C4' G A2481 -101.442 -67.942 -21.751 1.00 0.01 C
ATOM 8 O4' G A2481 -101.880 -66.655 -22.169 1.00 0.01 O
ATOM 9 C3' G A2481 -100.178 -67.658 -21.001 1.00 0.01 C
ATOM 10 O3' G A2481 -99.359 -68.778 -20.895 1.00 0.01 O
ATOM 11 C2' G A2481 -99.569 -66.548 -21.804 1.00 0.01 C
ATOM 12 O2' G A2481 -99.019 -67.058 -23.014 1.00 0.01 O
ATOM 13 C1' G A2481 -100.805 -65.756 -22.143 1.00 0.01 C
ATOM 14 N9 G A2481 -101.113 -64.693 -21.166 1.00 0.01 N
ATOM 15 C8 G A2481 -102.232 -64.655 -20.386 1.00 0.01 C
ATOM 16 N7 G A2481 -102.347 -63.585 -19.671 1.00 0.01 N
ATOM 17 C5 G A2481 -101.256 -62.843 -20.044 1.00 0.01 C
ATOM 18 C6 G A2481 -100.854 -61.573 -19.589 1.00 0.01 C
ATOM 19 O6 G A2481 -101.451 -60.892 -18.747 1.00 0.01 O
ATOM 20 N1 G A2481 -99.662 -61.167 -20.190 1.00 0.01 N
ATOM 21 C2 G A2481 -98.969 -61.907 -21.123 1.00 0.01 C
ATOM 22 N2 G A2481 -97.838 -61.418 -21.652 1.00 0.01 N
ATOM 23 N3 G A2481 -99.364 -63.088 -21.536 1.00 0.01 N
ATOM 24 C4 G A2481 -100.496 -63.499 -20.964 1.00 0.01 C
ATOM 25 P U A2482 -98.620 -69.062 -19.535 1.00 0.01 P
ATOM 26 OP1 U A2482 -98.151 -70.478 -19.609 1.00 0.01 O
ATOM 27 OP2 U A2482 -99.533 -68.651 -18.439 1.00 0.01 O
ATOM 28 O5' U A2482 -97.399 -68.059 -19.597 1.00 0.01 O
TER
ATOM 1 O3' G B2483 -90.358 -63.576 -15.154 1.00 0.01 O
ATOM 2 P U B2484 -88.935 -63.194 -15.722 1.00 8.27 P
ATOM 3 OP1 U B2484 -88.395 -64.382 -16.391 1.00 8.27 O
ATOM 4 OP2 U B2484 -88.186 -62.616 -14.611 1.00 8.27 O
ATOM 5 O5' U B2484 -89.284 -62.081 -16.785 1.00 8.27 O
ATOM 6 C5' U B2484 -88.372 -61.030 -17.078 1.00 8.27 C
ATOM 7 C4' U B2484 -88.974 -59.677 -16.796 1.00 8.27 C
ATOM 8 O4' U B2484 -89.815 -59.276 -17.923 1.00 8.27 O
ATOM 9 C3' U B2484 -89.877 -59.644 -15.581 1.00 8.27 C
ATOM 10 O3' U B2484 -89.875 -58.321 -15.035 1.00 8.27 O
ATOM 11 C2' U B2484 -91.238 -59.983 -16.201 1.00 8.27 C
ATOM 12 O2' U B2484 -92.379 -59.668 -15.412 1.00 8.27 O
ATOM 13 C1' U B2484 -91.160 -59.159 -17.479 1.00 8.27 C
ATOM 14 N1 U B2484 -92.066 -59.604 -18.569 1.00 9.71 N
ATOM 15 C2 U B2484 -93.382 -59.073 -18.627 1.00 9.71 C
ATOM 16 O2 U B2484 -93.868 -58.282 -17.807 1.00 9.71 O
ATOM 17 N3 U B2484 -94.147 -59.510 -19.692 1.00 9.71 N
ATOM 18 C4 U B2484 -93.750 -60.382 -20.699 1.00 9.71 C
ATOM 19 O4 U B2484 -94.535 -60.686 -21.617 1.00 9.71 O
ATOM 20 C5 U B2484 -92.389 -60.865 -20.573 1.00 9.71 C
ATOM 21 C6 U B2484 -91.604 -60.472 -19.545 1.00 9.71 C
ATOM 22 P U B2485 -89.260 -58.059 -13.570 1.00 0.01 P
ATOM 23 OP1 U B2485 -87.779 -58.202 -13.678 1.00 0.01 O
ATOM 24 OP2 U B2485 -90.007 -58.935 -12.600 1.00 0.01 O
ATOM 25 O5' U B2485 -89.641 -56.548 -13.304 1.00 0.01 O
TER
Atoms:
OP1: (-104.087,-69.563,-18.868)
OP2: (-104.322,-67.260,-17.960)
C3': (-100.178,-67.658,-21.001)
C1': (-100.805,-65.756,-22.143)
C5': (-102.513,-68.580,-20.956)
O6: (-101.451,-60.892,-18.747)
O4': (-101.880,-66.655,-22.169)
C8: (-102.232,-64.655,-20.386)
C2: (-98.969,-61.907,-21.123)
C6: (-100.854,-61.573,-19.589)
C5: (-101.256,-62.843,-20.044)
C4: (-100.496,-63.499,-20.964)
P: (-104.181,-68.138,-19.097)
C4': (-101.442,-67.942,-21.751)
C2': (-99.569,-66.548,-21.804)
O2': (-99.019,-67.058,-23.014)
N1: (-99.662,-61.167,-20.190)
N2: (-97.838,-61.418,-21.652)
N3: (-99.364,-63.088,-21.536)
N7: (-102.347,-63.585,-19.671)
N9: (-101.113,-64.693,-21.166)
O5': (-102.987,-67.704,-19.983)
O3': (-99.359,-68.778,-20.895)
OP2: (-104.322,-67.260,-17.960)
C3': (-100.178,-67.658,-21.001)
C1': (-100.805,-65.756,-22.143)
C5': (-102.513,-68.580,-20.956)
O6: (-101.451,-60.892,-18.747)
O4': (-101.880,-66.655,-22.169)
C8: (-102.232,-64.655,-20.386)
C2: (-98.969,-61.907,-21.123)
C6: (-100.854,-61.573,-19.589)
C5: (-101.256,-62.843,-20.044)
C4: (-100.496,-63.499,-20.964)
P: (-104.181,-68.138,-19.097)
C4': (-101.442,-67.942,-21.751)
C2': (-99.569,-66.548,-21.804)
O2': (-99.019,-67.058,-23.014)
N1: (-99.662,-61.167,-20.190)
N2: (-97.838,-61.418,-21.652)
N3: (-99.364,-63.088,-21.536)
N7: (-102.347,-63.585,-19.671)
N9: (-101.113,-64.693,-21.166)
O5': (-102.987,-67.704,-19.983)
O3': (-99.359,-68.778,-20.895)
C4: (-93.750,-60.382,-20.699)
N3: (-94.147,-59.510,-19.692)
OP1: (-88.395,-64.382,-16.391)
OP2: (-88.186,-62.616,-14.611)
C2: (-93.382,-59.073,-18.627)
C1': (-91.160,-59.159,-17.479)
C3': (-89.877,-59.644,-15.581)
O5': (-89.284,-62.081,-16.785)
O4': (-89.815,-59.276,-17.923)
C5': (-88.372,-61.030,-17.078)
P: (-88.935,-63.194,-15.722)
C4': (-88.974,-59.677,-16.796)
C2': (-91.238,-59.983,-16.201)
O2': (-92.379,-59.668,-15.412)
N1: (-92.066,-59.604,-18.569)
O4: (-94.535,-60.686,-21.617)
O2: (-93.868,-58.282,-17.807)
C6: (-91.604,-60.472,-19.545)
C5: (-92.389,-60.865,-20.573)
O3': (-89.875,-58.321,-15.035)
N3: (-94.147,-59.510,-19.692)
OP1: (-88.395,-64.382,-16.391)
OP2: (-88.186,-62.616,-14.611)
C2: (-93.382,-59.073,-18.627)
C1': (-91.160,-59.159,-17.479)
C3': (-89.877,-59.644,-15.581)
O5': (-89.284,-62.081,-16.785)
O4': (-89.815,-59.276,-17.923)
C5': (-88.372,-61.030,-17.078)
P: (-88.935,-63.194,-15.722)
C4': (-88.974,-59.677,-16.796)
C2': (-91.238,-59.983,-16.201)
O2': (-92.379,-59.668,-15.412)
N1: (-92.066,-59.604,-18.569)
O4: (-94.535,-60.686,-21.617)
O2: (-93.868,-58.282,-17.807)
C6: (-91.604,-60.472,-19.545)
C5: (-92.389,-60.865,-20.573)
O3': (-89.875,-58.321,-15.035)
Image (generated by PyMOL):