Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1547:A1562
Extra
PDB:
ATOM 1 O3' G A1546 30.656 -51.695 -13.203 1.00 38.86 O
ATOM 2 P C A1547 30.121 -51.321 -11.741 1.00 54.48 P
ATOM 3 OP1 C A1547 29.215 -52.417 -11.308 1.00 40.66 O
ATOM 4 OP2 C A1547 29.604 -49.940 -11.801 1.00 48.89 O
ATOM 5 O5' C A1547 31.447 -51.349 -10.883 1.00 53.37 O
ATOM 6 C5' C A1547 32.366 -52.426 -11.004 1.00 40.53 C
ATOM 7 C4' C A1547 33.511 -52.280 -10.039 1.00 36.21 C
ATOM 8 O4' C A1547 34.487 -51.368 -10.593 1.00 39.55 O
ATOM 9 C3' C A1547 33.141 -51.722 -8.674 1.00 36.15 C
ATOM 10 O3' C A1547 33.940 -52.335 -7.690 1.00 28.44 O
ATOM 11 C2' C A1547 33.531 -50.264 -8.790 1.00 35.33 C
ATOM 12 O2' C A1547 33.806 -49.643 -7.560 1.00 56.27 O
ATOM 13 C1' C A1547 34.766 -50.355 -9.661 1.00 33.06 C
ATOM 14 N1 C A1547 35.053 -49.129 -10.407 1.00 38.91 N
ATOM 15 C2 C A1547 36.012 -48.207 -9.972 1.00 49.54 C
ATOM 16 O2 C A1547 36.652 -48.420 -8.911 1.00 57.54 O
ATOM 17 N3 C A1547 36.207 -47.095 -10.739 1.00 49.40 N
ATOM 18 C4 C A1547 35.492 -46.897 -11.865 1.00 48.89 C
ATOM 19 N4 C A1547 35.689 -45.792 -12.604 1.00 48.68 N
ATOM 20 C5 C A1547 34.517 -47.831 -12.304 1.00 46.98 C
ATOM 21 C6 C A1547 34.347 -48.914 -11.549 1.00 46.40 C
ATOM 22 P A A1548 33.692 -53.862 -7.307 1.00 47.28 P
ATOM 23 OP1 A A1548 32.292 -53.966 -6.790 1.00 40.09 O
ATOM 24 OP2 A A1548 34.812 -54.286 -6.434 1.00 46.87 O
ATOM 25 O5' A A1548 33.796 -54.598 -8.698 1.00 30.76 O
TER
ATOM 1 O3' U B1561 37.708 -44.211 -14.778 1.00 36.22 O
ATOM 2 P G B1562 37.681 -43.114 -13.595 1.00 44.09 P
ATOM 3 OP1 G B1562 39.020 -42.484 -13.550 1.00 32.89 O
ATOM 4 OP2 G B1562 37.163 -43.784 -12.359 1.00 47.79 O
ATOM 5 O5' G B1562 36.613 -42.064 -14.132 1.00 40.38 O
ATOM 6 C5' G B1562 36.990 -41.063 -15.061 1.00 31.21 C
ATOM 7 C4' G B1562 35.824 -40.609 -15.902 1.00 42.77 C
ATOM 8 O4' G B1562 35.469 -41.635 -16.863 1.00 45.17 O
ATOM 9 C3' G B1562 34.520 -40.333 -15.168 1.00 35.83 C
ATOM 10 O3' G B1562 34.505 -39.072 -14.548 1.00 37.33 O
ATOM 11 C2' G B1562 33.512 -40.444 -16.285 1.00 33.18 C
ATOM 12 O2' G B1562 33.605 -39.306 -17.120 1.00 33.21 O
ATOM 13 C1' G B1562 34.069 -41.633 -17.055 1.00 37.65 C
ATOM 14 N9 G B1562 33.536 -42.908 -16.556 1.00 34.17 N
ATOM 15 C8 G B1562 34.211 -43.824 -15.806 1.00 33.98 C
ATOM 16 N7 G B1562 33.475 -44.863 -15.527 1.00 45.13 N
ATOM 17 C5 G B1562 32.233 -44.639 -16.128 1.00 39.76 C
ATOM 18 C6 G B1562 31.015 -45.416 -16.174 1.00 37.83 C
ATOM 19 O6 G B1562 30.708 -46.520 -15.688 1.00 36.69 O
ATOM 20 N1 G B1562 30.036 -44.780 -16.910 1.00 37.46 N
ATOM 21 C2 G B1562 30.196 -43.555 -17.498 1.00 41.00 C
ATOM 22 N2 G B1562 29.126 -43.104 -18.148 1.00 50.50 N
ATOM 23 N3 G B1562 31.297 -42.822 -17.475 1.00 45.31 N
ATOM 24 C4 G B1562 32.279 -43.423 -16.776 1.00 39.70 C
ATOM 25 P G B1563 33.530 -38.808 -13.321 1.00 36.45 P
ATOM 26 OP1 G B1563 33.790 -37.413 -12.849 1.00 34.51 O
ATOM 27 OP2 G B1563 33.710 -39.928 -12.373 1.00 36.54 O
ATOM 28 O5' G B1563 32.106 -38.912 -13.994 1.00 31.56 O
TER
ATOM 2 P C A1547 30.121 -51.321 -11.741 1.00 54.48 P
ATOM 3 OP1 C A1547 29.215 -52.417 -11.308 1.00 40.66 O
ATOM 4 OP2 C A1547 29.604 -49.940 -11.801 1.00 48.89 O
ATOM 5 O5' C A1547 31.447 -51.349 -10.883 1.00 53.37 O
ATOM 6 C5' C A1547 32.366 -52.426 -11.004 1.00 40.53 C
ATOM 7 C4' C A1547 33.511 -52.280 -10.039 1.00 36.21 C
ATOM 8 O4' C A1547 34.487 -51.368 -10.593 1.00 39.55 O
ATOM 9 C3' C A1547 33.141 -51.722 -8.674 1.00 36.15 C
ATOM 10 O3' C A1547 33.940 -52.335 -7.690 1.00 28.44 O
ATOM 11 C2' C A1547 33.531 -50.264 -8.790 1.00 35.33 C
ATOM 12 O2' C A1547 33.806 -49.643 -7.560 1.00 56.27 O
ATOM 13 C1' C A1547 34.766 -50.355 -9.661 1.00 33.06 C
ATOM 14 N1 C A1547 35.053 -49.129 -10.407 1.00 38.91 N
ATOM 15 C2 C A1547 36.012 -48.207 -9.972 1.00 49.54 C
ATOM 16 O2 C A1547 36.652 -48.420 -8.911 1.00 57.54 O
ATOM 17 N3 C A1547 36.207 -47.095 -10.739 1.00 49.40 N
ATOM 18 C4 C A1547 35.492 -46.897 -11.865 1.00 48.89 C
ATOM 19 N4 C A1547 35.689 -45.792 -12.604 1.00 48.68 N
ATOM 20 C5 C A1547 34.517 -47.831 -12.304 1.00 46.98 C
ATOM 21 C6 C A1547 34.347 -48.914 -11.549 1.00 46.40 C
ATOM 22 P A A1548 33.692 -53.862 -7.307 1.00 47.28 P
ATOM 23 OP1 A A1548 32.292 -53.966 -6.790 1.00 40.09 O
ATOM 24 OP2 A A1548 34.812 -54.286 -6.434 1.00 46.87 O
ATOM 25 O5' A A1548 33.796 -54.598 -8.698 1.00 30.76 O
TER
ATOM 1 O3' U B1561 37.708 -44.211 -14.778 1.00 36.22 O
ATOM 2 P G B1562 37.681 -43.114 -13.595 1.00 44.09 P
ATOM 3 OP1 G B1562 39.020 -42.484 -13.550 1.00 32.89 O
ATOM 4 OP2 G B1562 37.163 -43.784 -12.359 1.00 47.79 O
ATOM 5 O5' G B1562 36.613 -42.064 -14.132 1.00 40.38 O
ATOM 6 C5' G B1562 36.990 -41.063 -15.061 1.00 31.21 C
ATOM 7 C4' G B1562 35.824 -40.609 -15.902 1.00 42.77 C
ATOM 8 O4' G B1562 35.469 -41.635 -16.863 1.00 45.17 O
ATOM 9 C3' G B1562 34.520 -40.333 -15.168 1.00 35.83 C
ATOM 10 O3' G B1562 34.505 -39.072 -14.548 1.00 37.33 O
ATOM 11 C2' G B1562 33.512 -40.444 -16.285 1.00 33.18 C
ATOM 12 O2' G B1562 33.605 -39.306 -17.120 1.00 33.21 O
ATOM 13 C1' G B1562 34.069 -41.633 -17.055 1.00 37.65 C
ATOM 14 N9 G B1562 33.536 -42.908 -16.556 1.00 34.17 N
ATOM 15 C8 G B1562 34.211 -43.824 -15.806 1.00 33.98 C
ATOM 16 N7 G B1562 33.475 -44.863 -15.527 1.00 45.13 N
ATOM 17 C5 G B1562 32.233 -44.639 -16.128 1.00 39.76 C
ATOM 18 C6 G B1562 31.015 -45.416 -16.174 1.00 37.83 C
ATOM 19 O6 G B1562 30.708 -46.520 -15.688 1.00 36.69 O
ATOM 20 N1 G B1562 30.036 -44.780 -16.910 1.00 37.46 N
ATOM 21 C2 G B1562 30.196 -43.555 -17.498 1.00 41.00 C
ATOM 22 N2 G B1562 29.126 -43.104 -18.148 1.00 50.50 N
ATOM 23 N3 G B1562 31.297 -42.822 -17.475 1.00 45.31 N
ATOM 24 C4 G B1562 32.279 -43.423 -16.776 1.00 39.70 C
ATOM 25 P G B1563 33.530 -38.808 -13.321 1.00 36.45 P
ATOM 26 OP1 G B1563 33.790 -37.413 -12.849 1.00 34.51 O
ATOM 27 OP2 G B1563 33.710 -39.928 -12.373 1.00 36.54 O
ATOM 28 O5' G B1563 32.106 -38.912 -13.994 1.00 31.56 O
TER
Atoms:
C2: (36.012,-48.207,-9.972)
OP1: (29.215,-52.417,-11.308)
OP2: (29.604,-49.940,-11.801)
C4: (35.492,-46.897,-11.865)
O5': (31.447,-51.349,-10.883)
C3': (33.141,-51.722,-8.674)
C1': (34.766,-50.355,-9.661)
O4': (34.487,-51.368,-10.593)
C5': (32.366,-52.426,-11.004)
P: (30.121,-51.321,-11.741)
O2: (36.652,-48.420,-8.911)
C4': (33.511,-52.280,-10.039)
C2': (33.531,-50.264,-8.790)
O2': (33.806,-49.643,-7.560)
N1: (35.053,-49.129,-10.407)
N3: (36.207,-47.095,-10.739)
N4: (35.689,-45.792,-12.604)
C6: (34.347,-48.914,-11.549)
C5: (34.517,-47.831,-12.304)
O3': (33.940,-52.335,-7.690)
OP1: (29.215,-52.417,-11.308)
OP2: (29.604,-49.940,-11.801)
C4: (35.492,-46.897,-11.865)
O5': (31.447,-51.349,-10.883)
C3': (33.141,-51.722,-8.674)
C1': (34.766,-50.355,-9.661)
O4': (34.487,-51.368,-10.593)
C5': (32.366,-52.426,-11.004)
P: (30.121,-51.321,-11.741)
O2: (36.652,-48.420,-8.911)
C4': (33.511,-52.280,-10.039)
C2': (33.531,-50.264,-8.790)
O2': (33.806,-49.643,-7.560)
N1: (35.053,-49.129,-10.407)
N3: (36.207,-47.095,-10.739)
N4: (35.689,-45.792,-12.604)
C6: (34.347,-48.914,-11.549)
C5: (34.517,-47.831,-12.304)
O3': (33.940,-52.335,-7.690)
OP1: (39.020,-42.484,-13.550)
OP2: (37.163,-43.784,-12.359)
C3': (34.520,-40.333,-15.168)
C1': (34.069,-41.633,-17.055)
C5': (36.990,-41.063,-15.061)
O6: (30.708,-46.520,-15.688)
O4': (35.469,-41.635,-16.863)
C8: (34.211,-43.824,-15.806)
C2: (30.196,-43.555,-17.498)
C6: (31.015,-45.416,-16.174)
C5: (32.233,-44.639,-16.128)
C4: (32.279,-43.423,-16.776)
P: (37.681,-43.114,-13.595)
C4': (35.824,-40.609,-15.902)
C2': (33.512,-40.444,-16.285)
O2': (33.605,-39.306,-17.120)
N1: (30.036,-44.780,-16.910)
N2: (29.126,-43.104,-18.148)
N3: (31.297,-42.822,-17.475)
N7: (33.475,-44.863,-15.527)
N9: (33.536,-42.908,-16.556)
O5': (36.613,-42.064,-14.132)
O3': (34.505,-39.072,-14.548)
OP2: (37.163,-43.784,-12.359)
C3': (34.520,-40.333,-15.168)
C1': (34.069,-41.633,-17.055)
C5': (36.990,-41.063,-15.061)
O6: (30.708,-46.520,-15.688)
O4': (35.469,-41.635,-16.863)
C8: (34.211,-43.824,-15.806)
C2: (30.196,-43.555,-17.498)
C6: (31.015,-45.416,-16.174)
C5: (32.233,-44.639,-16.128)
C4: (32.279,-43.423,-16.776)
P: (37.681,-43.114,-13.595)
C4': (35.824,-40.609,-15.902)
C2': (33.512,-40.444,-16.285)
O2': (33.605,-39.306,-17.120)
N1: (30.036,-44.780,-16.910)
N2: (29.126,-43.104,-18.148)
N3: (31.297,-42.822,-17.475)
N7: (33.475,-44.863,-15.527)
N9: (33.536,-42.908,-16.556)
O5': (36.613,-42.064,-14.132)
O3': (34.505,-39.072,-14.548)
Image (generated by PyMOL):