Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0442:0627
Extra
PDB:
ATOM 1 O3' A A 441 38.709 136.156 59.738 1.00 32.53 O
ATOM 2 P U A 442 38.916 135.822 61.294 1.00 30.69 P
ATOM 3 OP1 U A 442 37.597 135.453 61.861 1.00 31.79 O
ATOM 4 OP2 U A 442 39.685 136.919 61.904 1.00 32.05 O
ATOM 5 O5' U A 442 39.821 134.513 61.278 1.00 30.31 O
ATOM 6 C5' U A 442 41.203 134.562 60.885 1.00 29.10 C
ATOM 7 C4' U A 442 42.029 133.685 61.795 1.00 29.53 C
ATOM 8 O4' U A 442 41.962 134.225 63.145 1.00 30.61 O
ATOM 9 C3' U A 442 41.576 132.227 61.906 1.00 28.42 C
ATOM 10 O3' U A 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 11 C2' U A 442 40.707 132.261 63.157 1.00 29.53 C
ATOM 12 O2' U A 442 40.548 131.028 63.814 1.00 30.09 O
ATOM 13 C1' U A 442 41.508 133.219 64.024 1.00 31.90 C
ATOM 14 N1 U A 442 40.753 133.838 65.119 1.00 36.66 N
ATOM 15 C2 U A 442 41.172 133.568 66.417 1.00 40.02 C
ATOM 16 O2 U A 442 42.123 132.845 66.678 1.00 43.03 O
ATOM 17 N3 U A 442 40.431 134.169 67.401 1.00 41.03 N
ATOM 18 C4 U A 442 39.338 134.985 67.231 1.00 41.48 C
ATOM 19 O4 U A 442 38.754 135.418 68.222 1.00 45.20 O
ATOM 20 C5 U A 442 38.969 135.219 65.867 1.00 40.39 C
ATOM 21 C6 U A 442 39.673 134.652 64.882 1.00 37.40 C
ATOM 22 P A A 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 23 OP1 A A 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 24 OP2 A A 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 25 O5' A A 443 42.466 130.107 60.005 1.00 29.67 O
TER
ATOM 1 O3' C B 626 32.514 131.208 77.516 1.00 30.67 O
ATOM 2 P A B 627 32.624 130.058 76.403 1.00 31.93 P
ATOM 3 OP1 A B 627 31.273 129.450 76.325 1.00 33.09 O
ATOM 4 OP2 A B 627 33.795 129.200 76.667 1.00 33.45 O
ATOM 5 O5' A B 627 32.902 130.844 75.045 1.00 32.26 O
ATOM 6 C5' A B 627 31.881 131.647 74.433 1.00 30.15 C
ATOM 7 C4' A B 627 32.447 132.413 73.262 1.00 32.64 C
ATOM 8 O4' A B 627 33.518 133.286 73.715 1.00 33.27 O
ATOM 9 C3' A B 627 33.091 131.567 72.181 1.00 33.02 C
ATOM 10 O3' A B 627 32.111 131.052 71.296 1.00 32.81 O
ATOM 11 C2' A B 627 34.024 132.569 71.517 1.00 33.84 C
ATOM 12 O2' A B 627 33.325 133.474 70.690 1.00 36.06 O
ATOM 13 C1' A B 627 34.538 133.342 72.733 1.00 32.80 C
ATOM 14 N9 A B 627 35.756 132.777 73.319 1.00 34.75 N
ATOM 15 C8 A B 627 35.850 132.003 74.450 1.00 33.59 C
ATOM 16 N7 A B 627 37.079 131.671 74.760 1.00 36.31 N
ATOM 17 C5 A B 627 37.848 132.258 73.763 1.00 35.96 C
ATOM 18 C6 A B 627 39.236 132.291 73.531 1.00 36.46 C
ATOM 19 N6 A B 627 40.136 131.713 74.327 1.00 35.92 N
ATOM 20 N1 A B 627 39.675 132.953 72.439 1.00 38.11 N
ATOM 21 C2 A B 627 38.780 133.550 71.652 1.00 36.10 C
ATOM 22 N3 A B 627 37.456 133.605 71.773 1.00 37.71 N
ATOM 23 C4 A B 627 37.046 132.930 72.861 1.00 35.56 C
ATOM 24 P G B 628 32.232 129.541 70.759 1.00 34.42 P
ATOM 25 OP1 G B 628 30.939 129.226 70.091 1.00 32.58 O
ATOM 26 OP2 G B 628 32.719 128.664 71.865 1.00 33.16 O
ATOM 27 O5' G B 628 33.375 129.619 69.651 1.00 29.93 O
TER
ATOM 2 P U A 442 38.916 135.822 61.294 1.00 30.69 P
ATOM 3 OP1 U A 442 37.597 135.453 61.861 1.00 31.79 O
ATOM 4 OP2 U A 442 39.685 136.919 61.904 1.00 32.05 O
ATOM 5 O5' U A 442 39.821 134.513 61.278 1.00 30.31 O
ATOM 6 C5' U A 442 41.203 134.562 60.885 1.00 29.10 C
ATOM 7 C4' U A 442 42.029 133.685 61.795 1.00 29.53 C
ATOM 8 O4' U A 442 41.962 134.225 63.145 1.00 30.61 O
ATOM 9 C3' U A 442 41.576 132.227 61.906 1.00 28.42 C
ATOM 10 O3' U A 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 11 C2' U A 442 40.707 132.261 63.157 1.00 29.53 C
ATOM 12 O2' U A 442 40.548 131.028 63.814 1.00 30.09 O
ATOM 13 C1' U A 442 41.508 133.219 64.024 1.00 31.90 C
ATOM 14 N1 U A 442 40.753 133.838 65.119 1.00 36.66 N
ATOM 15 C2 U A 442 41.172 133.568 66.417 1.00 40.02 C
ATOM 16 O2 U A 442 42.123 132.845 66.678 1.00 43.03 O
ATOM 17 N3 U A 442 40.431 134.169 67.401 1.00 41.03 N
ATOM 18 C4 U A 442 39.338 134.985 67.231 1.00 41.48 C
ATOM 19 O4 U A 442 38.754 135.418 68.222 1.00 45.20 O
ATOM 20 C5 U A 442 38.969 135.219 65.867 1.00 40.39 C
ATOM 21 C6 U A 442 39.673 134.652 64.882 1.00 37.40 C
ATOM 22 P A A 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 23 OP1 A A 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 24 OP2 A A 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 25 O5' A A 443 42.466 130.107 60.005 1.00 29.67 O
TER
ATOM 1 O3' C B 626 32.514 131.208 77.516 1.00 30.67 O
ATOM 2 P A B 627 32.624 130.058 76.403 1.00 31.93 P
ATOM 3 OP1 A B 627 31.273 129.450 76.325 1.00 33.09 O
ATOM 4 OP2 A B 627 33.795 129.200 76.667 1.00 33.45 O
ATOM 5 O5' A B 627 32.902 130.844 75.045 1.00 32.26 O
ATOM 6 C5' A B 627 31.881 131.647 74.433 1.00 30.15 C
ATOM 7 C4' A B 627 32.447 132.413 73.262 1.00 32.64 C
ATOM 8 O4' A B 627 33.518 133.286 73.715 1.00 33.27 O
ATOM 9 C3' A B 627 33.091 131.567 72.181 1.00 33.02 C
ATOM 10 O3' A B 627 32.111 131.052 71.296 1.00 32.81 O
ATOM 11 C2' A B 627 34.024 132.569 71.517 1.00 33.84 C
ATOM 12 O2' A B 627 33.325 133.474 70.690 1.00 36.06 O
ATOM 13 C1' A B 627 34.538 133.342 72.733 1.00 32.80 C
ATOM 14 N9 A B 627 35.756 132.777 73.319 1.00 34.75 N
ATOM 15 C8 A B 627 35.850 132.003 74.450 1.00 33.59 C
ATOM 16 N7 A B 627 37.079 131.671 74.760 1.00 36.31 N
ATOM 17 C5 A B 627 37.848 132.258 73.763 1.00 35.96 C
ATOM 18 C6 A B 627 39.236 132.291 73.531 1.00 36.46 C
ATOM 19 N6 A B 627 40.136 131.713 74.327 1.00 35.92 N
ATOM 20 N1 A B 627 39.675 132.953 72.439 1.00 38.11 N
ATOM 21 C2 A B 627 38.780 133.550 71.652 1.00 36.10 C
ATOM 22 N3 A B 627 37.456 133.605 71.773 1.00 37.71 N
ATOM 23 C4 A B 627 37.046 132.930 72.861 1.00 35.56 C
ATOM 24 P G B 628 32.232 129.541 70.759 1.00 34.42 P
ATOM 25 OP1 G B 628 30.939 129.226 70.091 1.00 32.58 O
ATOM 26 OP2 G B 628 32.719 128.664 71.865 1.00 33.16 O
ATOM 27 O5' G B 628 33.375 129.619 69.651 1.00 29.93 O
TER
Atoms:
C4: (39.338,134.985,67.231)
N3: (40.431,134.169,67.401)
OP1: (37.597,135.453,61.861)
OP2: (39.685,136.919,61.904)
C2: (41.172,133.568,66.417)
C1': (41.508,133.219,64.024)
C3': (41.576,132.227,61.906)
O5': (39.821,134.513,61.278)
O4': (41.962,134.225,63.145)
C5': (41.203,134.562,60.885)
P: (38.916,135.822,61.294)
C4': (42.029,133.685,61.795)
C2': (40.707,132.261,63.157)
O2': (40.548,131.028,63.814)
N1: (40.753,133.838,65.119)
O4: (38.754,135.418,68.222)
O2: (42.123,132.845,66.678)
C6: (39.673,134.652,64.882)
C5: (38.969,135.219,65.867)
O3': (42.706,131.394,62.153)
N3: (40.431,134.169,67.401)
OP1: (37.597,135.453,61.861)
OP2: (39.685,136.919,61.904)
C2: (41.172,133.568,66.417)
C1': (41.508,133.219,64.024)
C3': (41.576,132.227,61.906)
O5': (39.821,134.513,61.278)
O4': (41.962,134.225,63.145)
C5': (41.203,134.562,60.885)
P: (38.916,135.822,61.294)
C4': (42.029,133.685,61.795)
C2': (40.707,132.261,63.157)
O2': (40.548,131.028,63.814)
N1: (40.753,133.838,65.119)
O4: (38.754,135.418,68.222)
O2: (42.123,132.845,66.678)
C6: (39.673,134.652,64.882)
C5: (38.969,135.219,65.867)
O3': (42.706,131.394,62.153)
OP1: (31.273,129.450,76.325)
OP2: (33.795,129.200,76.667)
C3': (33.091,131.567,72.181)
C1': (34.538,133.342,72.733)
C5': (31.881,131.647,74.433)
O4': (33.518,133.286,73.715)
C8: (35.850,132.003,74.450)
O2': (33.325,133.474,70.690)
C6: (39.236,132.291,73.531)
C5: (37.848,132.258,73.763)
C4: (37.046,132.930,72.861)
P: (32.624,130.058,76.403)
C4': (32.447,132.413,73.262)
C2': (34.024,132.569,71.517)
C2: (38.780,133.550,71.652)
N1: (39.675,132.953,72.439)
N3: (37.456,133.605,71.773)
N6: (40.136,131.713,74.327)
N7: (37.079,131.671,74.760)
N9: (35.756,132.777,73.319)
O5': (32.902,130.844,75.045)
O3': (32.111,131.052,71.296)
OP2: (33.795,129.200,76.667)
C3': (33.091,131.567,72.181)
C1': (34.538,133.342,72.733)
C5': (31.881,131.647,74.433)
O4': (33.518,133.286,73.715)
C8: (35.850,132.003,74.450)
O2': (33.325,133.474,70.690)
C6: (39.236,132.291,73.531)
C5: (37.848,132.258,73.763)
C4: (37.046,132.930,72.861)
P: (32.624,130.058,76.403)
C4': (32.447,132.413,73.262)
C2': (34.024,132.569,71.517)
C2: (38.780,133.550,71.652)
N1: (39.675,132.953,72.439)
N3: (37.456,133.605,71.773)
N6: (40.136,131.713,74.327)
N7: (37.079,131.671,74.760)
N9: (35.756,132.777,73.319)
O5': (32.902,130.844,75.045)
O3': (32.111,131.052,71.296)
Image (generated by PyMOL):