Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1547:A1562
Extra
PDB:
ATOM 1 O3' G A1546 30.874 -51.401 -13.234 1.00 34.33 O
ATOM 2 P C A1547 30.369 -50.975 -11.758 1.00 47.30 P
ATOM 3 OP1 C A1547 29.411 -52.005 -11.285 1.00 38.73 O
ATOM 4 OP2 C A1547 29.924 -49.574 -11.842 1.00 49.23 O
ATOM 5 O5' C A1547 31.706 -51.057 -10.907 1.00 47.90 O
ATOM 6 C5' C A1547 32.479 -52.255 -10.869 1.00 41.37 C
ATOM 7 C4' C A1547 33.667 -52.136 -9.941 1.00 34.61 C
ATOM 8 O4' C A1547 34.652 -51.254 -10.531 1.00 39.50 O
ATOM 9 C3' C A1547 33.365 -51.564 -8.569 1.00 39.65 C
ATOM 10 O3' C A1547 34.180 -52.203 -7.606 1.00 35.78 O
ATOM 11 C2' C A1547 33.783 -50.107 -8.708 1.00 33.43 C
ATOM 12 O2' C A1547 34.126 -49.490 -7.507 1.00 37.14 O
ATOM 13 C1' C A1547 34.968 -50.218 -9.627 1.00 36.65 C
ATOM 14 N1 C A1547 35.235 -49.001 -10.409 1.00 37.51 N
ATOM 15 C2 C A1547 36.219 -48.072 -10.053 1.00 41.17 C
ATOM 16 O2 C A1547 36.886 -48.238 -9.017 1.00 53.76 O
ATOM 17 N3 C A1547 36.430 -46.993 -10.854 1.00 46.83 N
ATOM 18 C4 C A1547 35.707 -46.803 -11.983 1.00 45.44 C
ATOM 19 N4 C A1547 35.895 -45.726 -12.789 1.00 37.70 N
ATOM 20 C5 C A1547 34.715 -47.746 -12.347 1.00 46.22 C
ATOM 21 C6 C A1547 34.532 -48.812 -11.553 1.00 45.10 C
ATOM 22 P A A1548 33.895 -53.732 -7.199 1.00 41.96 P
ATOM 23 OP1 A A1548 32.494 -53.810 -6.674 1.00 36.08 O
ATOM 24 OP2 A A1548 35.015 -54.168 -6.327 1.00 40.55 O
ATOM 25 O5' A A1548 33.976 -54.474 -8.576 1.00 30.64 O
TER
ATOM 1 O3' U B1561 37.887 -44.025 -14.753 1.00 33.72 O
ATOM 2 P G B1562 37.915 -42.882 -13.627 1.00 42.97 P
ATOM 3 OP1 G B1562 39.263 -42.256 -13.672 1.00 36.53 O
ATOM 4 OP2 G B1562 37.441 -43.495 -12.346 1.00 30.02 O
ATOM 5 O5' G B1562 36.831 -41.857 -14.158 1.00 45.21 O
ATOM 6 C5' G B1562 37.201 -40.742 -14.944 1.00 33.56 C
ATOM 7 C4' G B1562 36.056 -40.312 -15.805 1.00 39.95 C
ATOM 8 O4' G B1562 35.730 -41.378 -16.731 1.00 47.22 O
ATOM 9 C3' G B1562 34.747 -40.059 -15.078 1.00 33.54 C
ATOM 10 O3' G B1562 34.693 -38.781 -14.486 1.00 38.14 O
ATOM 11 C2' G B1562 33.724 -40.266 -16.180 1.00 37.28 C
ATOM 12 O2' G B1562 33.713 -39.163 -17.062 1.00 45.44 O
ATOM 13 C1' G B1562 34.338 -41.432 -16.929 1.00 35.13 C
ATOM 14 N9 G B1562 33.845 -42.724 -16.441 1.00 33.10 N
ATOM 15 C8 G B1562 34.544 -43.680 -15.759 1.00 32.75 C
ATOM 16 N7 G B1562 33.808 -44.731 -15.491 1.00 40.03 N
ATOM 17 C5 G B1562 32.554 -44.455 -16.041 1.00 40.29 C
ATOM 18 C6 G B1562 31.339 -45.206 -16.078 1.00 37.77 C
ATOM 19 O6 G B1562 31.072 -46.329 -15.629 1.00 40.52 O
ATOM 20 N1 G B1562 30.338 -44.523 -16.734 1.00 38.02 N
ATOM 21 C2 G B1562 30.479 -43.281 -17.293 1.00 40.51 C
ATOM 22 N2 G B1562 29.404 -42.754 -17.906 1.00 46.10 N
ATOM 23 N3 G B1562 31.589 -42.586 -17.262 1.00 38.21 N
ATOM 24 C4 G B1562 32.579 -43.220 -16.629 1.00 34.88 C
ATOM 25 P G B1563 33.781 -38.522 -13.202 1.00 43.31 P
ATOM 26 OP1 G B1563 34.039 -37.120 -12.754 1.00 41.49 O
ATOM 27 OP2 G B1563 34.025 -39.630 -12.249 1.00 36.69 O
ATOM 28 O5' G B1563 32.322 -38.639 -13.801 1.00 35.70 O
TER
ATOM 2 P C A1547 30.369 -50.975 -11.758 1.00 47.30 P
ATOM 3 OP1 C A1547 29.411 -52.005 -11.285 1.00 38.73 O
ATOM 4 OP2 C A1547 29.924 -49.574 -11.842 1.00 49.23 O
ATOM 5 O5' C A1547 31.706 -51.057 -10.907 1.00 47.90 O
ATOM 6 C5' C A1547 32.479 -52.255 -10.869 1.00 41.37 C
ATOM 7 C4' C A1547 33.667 -52.136 -9.941 1.00 34.61 C
ATOM 8 O4' C A1547 34.652 -51.254 -10.531 1.00 39.50 O
ATOM 9 C3' C A1547 33.365 -51.564 -8.569 1.00 39.65 C
ATOM 10 O3' C A1547 34.180 -52.203 -7.606 1.00 35.78 O
ATOM 11 C2' C A1547 33.783 -50.107 -8.708 1.00 33.43 C
ATOM 12 O2' C A1547 34.126 -49.490 -7.507 1.00 37.14 O
ATOM 13 C1' C A1547 34.968 -50.218 -9.627 1.00 36.65 C
ATOM 14 N1 C A1547 35.235 -49.001 -10.409 1.00 37.51 N
ATOM 15 C2 C A1547 36.219 -48.072 -10.053 1.00 41.17 C
ATOM 16 O2 C A1547 36.886 -48.238 -9.017 1.00 53.76 O
ATOM 17 N3 C A1547 36.430 -46.993 -10.854 1.00 46.83 N
ATOM 18 C4 C A1547 35.707 -46.803 -11.983 1.00 45.44 C
ATOM 19 N4 C A1547 35.895 -45.726 -12.789 1.00 37.70 N
ATOM 20 C5 C A1547 34.715 -47.746 -12.347 1.00 46.22 C
ATOM 21 C6 C A1547 34.532 -48.812 -11.553 1.00 45.10 C
ATOM 22 P A A1548 33.895 -53.732 -7.199 1.00 41.96 P
ATOM 23 OP1 A A1548 32.494 -53.810 -6.674 1.00 36.08 O
ATOM 24 OP2 A A1548 35.015 -54.168 -6.327 1.00 40.55 O
ATOM 25 O5' A A1548 33.976 -54.474 -8.576 1.00 30.64 O
TER
ATOM 1 O3' U B1561 37.887 -44.025 -14.753 1.00 33.72 O
ATOM 2 P G B1562 37.915 -42.882 -13.627 1.00 42.97 P
ATOM 3 OP1 G B1562 39.263 -42.256 -13.672 1.00 36.53 O
ATOM 4 OP2 G B1562 37.441 -43.495 -12.346 1.00 30.02 O
ATOM 5 O5' G B1562 36.831 -41.857 -14.158 1.00 45.21 O
ATOM 6 C5' G B1562 37.201 -40.742 -14.944 1.00 33.56 C
ATOM 7 C4' G B1562 36.056 -40.312 -15.805 1.00 39.95 C
ATOM 8 O4' G B1562 35.730 -41.378 -16.731 1.00 47.22 O
ATOM 9 C3' G B1562 34.747 -40.059 -15.078 1.00 33.54 C
ATOM 10 O3' G B1562 34.693 -38.781 -14.486 1.00 38.14 O
ATOM 11 C2' G B1562 33.724 -40.266 -16.180 1.00 37.28 C
ATOM 12 O2' G B1562 33.713 -39.163 -17.062 1.00 45.44 O
ATOM 13 C1' G B1562 34.338 -41.432 -16.929 1.00 35.13 C
ATOM 14 N9 G B1562 33.845 -42.724 -16.441 1.00 33.10 N
ATOM 15 C8 G B1562 34.544 -43.680 -15.759 1.00 32.75 C
ATOM 16 N7 G B1562 33.808 -44.731 -15.491 1.00 40.03 N
ATOM 17 C5 G B1562 32.554 -44.455 -16.041 1.00 40.29 C
ATOM 18 C6 G B1562 31.339 -45.206 -16.078 1.00 37.77 C
ATOM 19 O6 G B1562 31.072 -46.329 -15.629 1.00 40.52 O
ATOM 20 N1 G B1562 30.338 -44.523 -16.734 1.00 38.02 N
ATOM 21 C2 G B1562 30.479 -43.281 -17.293 1.00 40.51 C
ATOM 22 N2 G B1562 29.404 -42.754 -17.906 1.00 46.10 N
ATOM 23 N3 G B1562 31.589 -42.586 -17.262 1.00 38.21 N
ATOM 24 C4 G B1562 32.579 -43.220 -16.629 1.00 34.88 C
ATOM 25 P G B1563 33.781 -38.522 -13.202 1.00 43.31 P
ATOM 26 OP1 G B1563 34.039 -37.120 -12.754 1.00 41.49 O
ATOM 27 OP2 G B1563 34.025 -39.630 -12.249 1.00 36.69 O
ATOM 28 O5' G B1563 32.322 -38.639 -13.801 1.00 35.70 O
TER
Atoms:
C2: (36.219,-48.072,-10.053)
OP1: (29.411,-52.005,-11.285)
OP2: (29.924,-49.574,-11.842)
C4: (35.707,-46.803,-11.983)
O5': (31.706,-51.057,-10.907)
C3': (33.365,-51.564,-8.569)
C1': (34.968,-50.218,-9.627)
O4': (34.652,-51.254,-10.531)
C5': (32.479,-52.255,-10.869)
P: (30.369,-50.975,-11.758)
O2: (36.886,-48.238,-9.017)
C4': (33.667,-52.136,-9.941)
C2': (33.783,-50.107,-8.708)
O2': (34.126,-49.490,-7.507)
N1: (35.235,-49.001,-10.409)
N3: (36.430,-46.993,-10.854)
N4: (35.895,-45.726,-12.789)
C6: (34.532,-48.812,-11.553)
C5: (34.715,-47.746,-12.347)
O3': (34.180,-52.203,-7.606)
OP1: (29.411,-52.005,-11.285)
OP2: (29.924,-49.574,-11.842)
C4: (35.707,-46.803,-11.983)
O5': (31.706,-51.057,-10.907)
C3': (33.365,-51.564,-8.569)
C1': (34.968,-50.218,-9.627)
O4': (34.652,-51.254,-10.531)
C5': (32.479,-52.255,-10.869)
P: (30.369,-50.975,-11.758)
O2: (36.886,-48.238,-9.017)
C4': (33.667,-52.136,-9.941)
C2': (33.783,-50.107,-8.708)
O2': (34.126,-49.490,-7.507)
N1: (35.235,-49.001,-10.409)
N3: (36.430,-46.993,-10.854)
N4: (35.895,-45.726,-12.789)
C6: (34.532,-48.812,-11.553)
C5: (34.715,-47.746,-12.347)
O3': (34.180,-52.203,-7.606)
OP1: (39.263,-42.256,-13.672)
OP2: (37.441,-43.495,-12.346)
C3': (34.747,-40.059,-15.078)
C1': (34.338,-41.432,-16.929)
C5': (37.201,-40.742,-14.944)
O6: (31.072,-46.329,-15.629)
O4': (35.730,-41.378,-16.731)
C8: (34.544,-43.680,-15.759)
C2: (30.479,-43.281,-17.293)
C6: (31.339,-45.206,-16.078)
C5: (32.554,-44.455,-16.041)
C4: (32.579,-43.220,-16.629)
P: (37.915,-42.882,-13.627)
C4': (36.056,-40.312,-15.805)
C2': (33.724,-40.266,-16.180)
O2': (33.713,-39.163,-17.062)
N1: (30.338,-44.523,-16.734)
N2: (29.404,-42.754,-17.906)
N3: (31.589,-42.586,-17.262)
N7: (33.808,-44.731,-15.491)
N9: (33.845,-42.724,-16.441)
O5': (36.831,-41.857,-14.158)
O3': (34.693,-38.781,-14.486)
OP2: (37.441,-43.495,-12.346)
C3': (34.747,-40.059,-15.078)
C1': (34.338,-41.432,-16.929)
C5': (37.201,-40.742,-14.944)
O6: (31.072,-46.329,-15.629)
O4': (35.730,-41.378,-16.731)
C8: (34.544,-43.680,-15.759)
C2: (30.479,-43.281,-17.293)
C6: (31.339,-45.206,-16.078)
C5: (32.554,-44.455,-16.041)
C4: (32.579,-43.220,-16.629)
P: (37.915,-42.882,-13.627)
C4': (36.056,-40.312,-15.805)
C2': (33.724,-40.266,-16.180)
O2': (33.713,-39.163,-17.062)
N1: (30.338,-44.523,-16.734)
N2: (29.404,-42.754,-17.906)
N3: (31.589,-42.586,-17.262)
N7: (33.808,-44.731,-15.491)
N9: (33.845,-42.724,-16.441)
O5': (36.831,-41.857,-14.158)
O3': (34.693,-38.781,-14.486)
Image (generated by PyMOL):