Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B11:B12
Extra
PDB:
ATOM 1 O3' A A 10 54.500 40.673 108.290 1.00 56.31 O
ATOM 2 P C A 11 53.548 41.914 108.647 1.00 57.63 P
ATOM 3 OP1 C A 11 52.763 42.223 107.426 1.00 57.30 O
ATOM 4 OP2 C A 11 54.345 42.982 109.297 1.00 56.81 O
ATOM 5 O5' C A 11 52.549 41.301 109.724 1.00 60.26 O
ATOM 6 C5' C A 11 52.978 41.095 111.081 1.00 62.82 C
ATOM 7 C4' C A 11 52.510 39.759 111.603 1.00 64.25 C
ATOM 8 O4' C A 11 51.062 39.677 111.551 1.00 65.26 O
ATOM 9 C3' C A 11 53.031 38.508 110.915 1.00 65.03 C
ATOM 10 O3' C A 11 53.150 37.524 111.929 1.00 66.14 O
ATOM 11 C2' C A 11 51.882 38.127 109.985 1.00 65.68 C
ATOM 12 O2' C A 11 51.874 36.737 109.707 1.00 66.31 O
ATOM 13 C1' C A 11 50.670 38.519 110.834 1.00 66.06 C
ATOM 14 N1 C A 11 49.443 38.862 110.093 1.00 66.29 N
ATOM 15 C2 C A 11 48.360 37.956 110.079 1.00 67.55 C
ATOM 16 O2 C A 11 48.486 36.848 110.631 1.00 67.15 O
ATOM 17 N3 C A 11 47.209 38.322 109.460 1.00 68.62 N
ATOM 18 C4 C A 11 47.120 39.523 108.869 1.00 68.41 C
ATOM 19 N4 C A 11 45.963 39.859 108.297 1.00 69.32 N
ATOM 20 C5 C A 11 48.214 40.436 108.843 1.00 67.64 C
ATOM 21 C6 C A 11 49.343 40.067 109.454 1.00 66.24 C
ATOM 22 P A A 12 54.601 37.031 112.394 1.00 67.17 P
ATOM 23 OP1 A A 12 54.416 36.073 113.507 1.00 68.22 O
ATOM 24 OP2 A A 12 55.478 38.209 112.596 1.00 67.23 O
ATOM 25 O5' A A 12 55.158 36.257 111.123 1.00 65.67 O
TER
ATOM 1 O3' C B 11 53.150 37.524 111.929 1.00 66.14 O
ATOM 2 P A B 12 54.601 37.031 112.394 1.00 67.17 P
ATOM 3 OP1 A B 12 54.416 36.073 113.507 1.00 68.22 O
ATOM 4 OP2 A B 12 55.478 38.209 112.596 1.00 67.23 O
ATOM 5 O5' A B 12 55.158 36.257 111.123 1.00 65.67 O
ATOM 6 C5' A B 12 55.027 34.835 110.996 1.00 64.83 C
ATOM 7 C4' A B 12 55.736 34.370 109.748 1.00 64.07 C
ATOM 8 O4' A B 12 54.962 34.760 108.580 1.00 63.73 O
ATOM 9 C3' A B 12 57.137 34.947 109.532 1.00 63.16 C
ATOM 10 O3' A B 12 57.938 33.977 108.852 1.00 61.35 O
ATOM 11 C2' A B 12 56.851 36.112 108.594 1.00 62.43 C
ATOM 12 O2' A B 12 57.949 36.533 107.822 1.00 63.26 O
ATOM 13 C1' A B 12 55.794 35.479 107.700 1.00 63.02 C
ATOM 14 N9 A B 12 54.987 36.427 106.941 1.00 62.27 N
ATOM 15 C8 A B 12 53.873 37.128 107.321 1.00 61.91 C
ATOM 16 N7 A B 12 53.417 37.936 106.396 1.00 60.96 N
ATOM 17 C5 A B 12 54.286 37.747 105.337 1.00 60.08 C
ATOM 18 C6 A B 12 54.366 38.332 104.075 1.00 59.92 C
ATOM 19 N6 A B 12 53.543 39.287 103.659 1.00 59.95 N
ATOM 20 N1 A B 12 55.350 37.910 103.245 1.00 60.17 N
ATOM 21 C2 A B 12 56.206 36.974 103.687 1.00 61.41 C
ATOM 22 N3 A B 12 56.242 36.366 104.864 1.00 61.65 N
ATOM 23 C4 A B 12 55.244 36.804 105.651 1.00 61.39 C
ATOM 24 P G B 13 59.360 33.546 109.462 1.00 62.54 P
ATOM 25 OP1 G B 13 59.828 32.300 108.789 1.00 62.75 O
ATOM 26 OP2 G B 13 59.230 33.579 110.935 1.00 61.12 O
ATOM 27 O5' G B 13 60.360 34.724 109.070 1.00 61.53 O
TER
ATOM 2 P C A 11 53.548 41.914 108.647 1.00 57.63 P
ATOM 3 OP1 C A 11 52.763 42.223 107.426 1.00 57.30 O
ATOM 4 OP2 C A 11 54.345 42.982 109.297 1.00 56.81 O
ATOM 5 O5' C A 11 52.549 41.301 109.724 1.00 60.26 O
ATOM 6 C5' C A 11 52.978 41.095 111.081 1.00 62.82 C
ATOM 7 C4' C A 11 52.510 39.759 111.603 1.00 64.25 C
ATOM 8 O4' C A 11 51.062 39.677 111.551 1.00 65.26 O
ATOM 9 C3' C A 11 53.031 38.508 110.915 1.00 65.03 C
ATOM 10 O3' C A 11 53.150 37.524 111.929 1.00 66.14 O
ATOM 11 C2' C A 11 51.882 38.127 109.985 1.00 65.68 C
ATOM 12 O2' C A 11 51.874 36.737 109.707 1.00 66.31 O
ATOM 13 C1' C A 11 50.670 38.519 110.834 1.00 66.06 C
ATOM 14 N1 C A 11 49.443 38.862 110.093 1.00 66.29 N
ATOM 15 C2 C A 11 48.360 37.956 110.079 1.00 67.55 C
ATOM 16 O2 C A 11 48.486 36.848 110.631 1.00 67.15 O
ATOM 17 N3 C A 11 47.209 38.322 109.460 1.00 68.62 N
ATOM 18 C4 C A 11 47.120 39.523 108.869 1.00 68.41 C
ATOM 19 N4 C A 11 45.963 39.859 108.297 1.00 69.32 N
ATOM 20 C5 C A 11 48.214 40.436 108.843 1.00 67.64 C
ATOM 21 C6 C A 11 49.343 40.067 109.454 1.00 66.24 C
ATOM 22 P A A 12 54.601 37.031 112.394 1.00 67.17 P
ATOM 23 OP1 A A 12 54.416 36.073 113.507 1.00 68.22 O
ATOM 24 OP2 A A 12 55.478 38.209 112.596 1.00 67.23 O
ATOM 25 O5' A A 12 55.158 36.257 111.123 1.00 65.67 O
TER
ATOM 1 O3' C B 11 53.150 37.524 111.929 1.00 66.14 O
ATOM 2 P A B 12 54.601 37.031 112.394 1.00 67.17 P
ATOM 3 OP1 A B 12 54.416 36.073 113.507 1.00 68.22 O
ATOM 4 OP2 A B 12 55.478 38.209 112.596 1.00 67.23 O
ATOM 5 O5' A B 12 55.158 36.257 111.123 1.00 65.67 O
ATOM 6 C5' A B 12 55.027 34.835 110.996 1.00 64.83 C
ATOM 7 C4' A B 12 55.736 34.370 109.748 1.00 64.07 C
ATOM 8 O4' A B 12 54.962 34.760 108.580 1.00 63.73 O
ATOM 9 C3' A B 12 57.137 34.947 109.532 1.00 63.16 C
ATOM 10 O3' A B 12 57.938 33.977 108.852 1.00 61.35 O
ATOM 11 C2' A B 12 56.851 36.112 108.594 1.00 62.43 C
ATOM 12 O2' A B 12 57.949 36.533 107.822 1.00 63.26 O
ATOM 13 C1' A B 12 55.794 35.479 107.700 1.00 63.02 C
ATOM 14 N9 A B 12 54.987 36.427 106.941 1.00 62.27 N
ATOM 15 C8 A B 12 53.873 37.128 107.321 1.00 61.91 C
ATOM 16 N7 A B 12 53.417 37.936 106.396 1.00 60.96 N
ATOM 17 C5 A B 12 54.286 37.747 105.337 1.00 60.08 C
ATOM 18 C6 A B 12 54.366 38.332 104.075 1.00 59.92 C
ATOM 19 N6 A B 12 53.543 39.287 103.659 1.00 59.95 N
ATOM 20 N1 A B 12 55.350 37.910 103.245 1.00 60.17 N
ATOM 21 C2 A B 12 56.206 36.974 103.687 1.00 61.41 C
ATOM 22 N3 A B 12 56.242 36.366 104.864 1.00 61.65 N
ATOM 23 C4 A B 12 55.244 36.804 105.651 1.00 61.39 C
ATOM 24 P G B 13 59.360 33.546 109.462 1.00 62.54 P
ATOM 25 OP1 G B 13 59.828 32.300 108.789 1.00 62.75 O
ATOM 26 OP2 G B 13 59.230 33.579 110.935 1.00 61.12 O
ATOM 27 O5' G B 13 60.360 34.724 109.070 1.00 61.53 O
TER
Atoms:
C2: (48.360,37.956,110.079)
OP1: (52.763,42.223,107.426)
OP2: (54.345,42.982,109.297)
C4: (47.120,39.523,108.869)
O5': (52.549,41.301,109.724)
C3': (53.031,38.508,110.915)
C1': (50.670,38.519,110.834)
O4': (51.062,39.677,111.551)
C5': (52.978,41.095,111.081)
P: (53.548,41.914,108.647)
O2: (48.486,36.848,110.631)
C4': (52.510,39.759,111.603)
C2': (51.882,38.127,109.985)
O2': (51.874,36.737,109.707)
N1: (49.443,38.862,110.093)
N3: (47.209,38.322,109.460)
N4: (45.963,39.859,108.297)
C6: (49.343,40.067,109.454)
C5: (48.214,40.436,108.843)
O3': (53.150,37.524,111.929)
OP1: (52.763,42.223,107.426)
OP2: (54.345,42.982,109.297)
C4: (47.120,39.523,108.869)
O5': (52.549,41.301,109.724)
C3': (53.031,38.508,110.915)
C1': (50.670,38.519,110.834)
O4': (51.062,39.677,111.551)
C5': (52.978,41.095,111.081)
P: (53.548,41.914,108.647)
O2: (48.486,36.848,110.631)
C4': (52.510,39.759,111.603)
C2': (51.882,38.127,109.985)
O2': (51.874,36.737,109.707)
N1: (49.443,38.862,110.093)
N3: (47.209,38.322,109.460)
N4: (45.963,39.859,108.297)
C6: (49.343,40.067,109.454)
C5: (48.214,40.436,108.843)
O3': (53.150,37.524,111.929)
OP1: (54.416,36.073,113.507)
OP2: (55.478,38.209,112.596)
C3': (57.137,34.947,109.532)
C1': (55.794,35.479,107.700)
C5': (55.027,34.835,110.996)
O4': (54.962,34.760,108.580)
C8: (53.873,37.128,107.321)
O2': (57.949,36.533,107.822)
C6: (54.366,38.332,104.075)
C5: (54.286,37.747,105.337)
C4: (55.244,36.804,105.651)
P: (54.601,37.031,112.394)
C4': (55.736,34.370,109.748)
C2': (56.851,36.112,108.594)
C2: (56.206,36.974,103.687)
N1: (55.350,37.910,103.245)
N3: (56.242,36.366,104.864)
N6: (53.543,39.287,103.659)
N7: (53.417,37.936,106.396)
N9: (54.987,36.427,106.941)
O5': (55.158,36.257,111.123)
O3': (57.938,33.977,108.852)
OP2: (55.478,38.209,112.596)
C3': (57.137,34.947,109.532)
C1': (55.794,35.479,107.700)
C5': (55.027,34.835,110.996)
O4': (54.962,34.760,108.580)
C8: (53.873,37.128,107.321)
O2': (57.949,36.533,107.822)
C6: (54.366,38.332,104.075)
C5: (54.286,37.747,105.337)
C4: (55.244,36.804,105.651)
P: (54.601,37.031,112.394)
C4': (55.736,34.370,109.748)
C2': (56.851,36.112,108.594)
C2: (56.206,36.974,103.687)
N1: (55.350,37.910,103.245)
N3: (56.242,36.366,104.864)
N6: (53.543,39.287,103.659)
N7: (53.417,37.936,106.396)
N9: (54.987,36.427,106.941)
O5': (55.158,36.257,111.123)
O3': (57.938,33.977,108.852)
Image (generated by PyMOL):