Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1318:A1219
Extra
PDB:
ATOM 1 O3' A A1317 -115.492 105.939 74.448 1.00 74.52 O
ATOM 2 P C A1318 -116.371 106.163 75.778 1.00 61.03 P
ATOM 3 OP1 C A1318 -117.186 104.928 75.982 1.00 61.03 O
ATOM 4 OP2 C A1318 -117.070 107.464 75.612 1.00 61.03 O
ATOM 5 O5' C A1318 -115.280 106.285 76.930 1.00 61.03 O
ATOM 6 C5' C A1318 -115.505 107.137 78.043 1.00 61.03 C
ATOM 7 C4' C A1318 -114.660 106.749 79.227 1.00 61.03 C
ATOM 8 O4' C A1318 -115.150 105.521 79.814 1.00 61.03 O
ATOM 9 C3' C A1318 -113.208 106.449 78.940 1.00 61.03 C
ATOM 10 O3' C A1318 -112.438 107.616 78.774 1.00 61.03 O
ATOM 11 C2' C A1318 -112.801 105.618 80.148 1.00 61.03 C
ATOM 12 O2' C A1318 -112.536 106.448 81.265 1.00 61.03 O
ATOM 13 C1' C A1318 -114.081 104.835 80.429 1.00 61.03 C
ATOM 14 N1 C A1318 -114.016 103.465 79.903 1.00 60.47 N
ATOM 15 C2 C A1318 -113.148 102.629 80.582 1.00 60.47 C
ATOM 16 O2 C A1318 -112.520 103.113 81.533 1.00 60.47 O
ATOM 17 N3 C A1318 -113.009 101.348 80.191 1.00 60.47 N
ATOM 18 C4 C A1318 -113.709 100.902 79.159 1.00 60.47 C
ATOM 19 N4 C A1318 -113.533 99.630 78.820 1.00 60.47 N
ATOM 20 C5 C A1318 -114.618 101.736 78.444 1.00 60.47 C
ATOM 21 C6 C A1318 -114.742 103.007 78.846 1.00 60.47 C
ATOM 22 P U A1319 -110.996 107.527 78.094 1.00 55.69 P
ATOM 23 OP1 U A1319 -110.312 108.811 78.368 1.00 55.69 O
ATOM 24 OP2 U A1319 -111.197 107.114 76.691 1.00 55.69 O
ATOM 25 O5' U A1319 -110.300 106.352 78.910 1.00 55.69 O
TER
ATOM 1 O3' G B1218 -111.614 95.739 80.127 1.00 55.80 O
ATOM 2 P G B1219 -110.701 96.703 79.224 1.00 58.38 P
ATOM 3 OP1 G B1219 -111.319 98.056 79.259 1.00 58.38 O
ATOM 4 OP2 G B1219 -110.524 96.027 77.910 1.00 58.38 O
ATOM 5 O5' G B1219 -109.317 96.718 80.021 1.00 58.38 O
ATOM 6 C5' G B1219 -109.243 97.253 81.335 1.00 58.38 C
ATOM 7 C4' G B1219 -107.946 96.892 82.006 1.00 58.38 C
ATOM 8 O4' G B1219 -107.812 95.455 82.071 1.00 58.38 O
ATOM 9 C3' G B1219 -106.684 97.357 81.306 1.00 58.38 C
ATOM 10 O3' G B1219 -106.373 98.710 81.586 1.00 58.38 O
ATOM 11 C2' G B1219 -105.645 96.378 81.823 1.00 58.38 C
ATOM 12 O2' G B1219 -105.198 96.752 83.115 1.00 58.38 O
ATOM 13 C1' G B1219 -106.460 95.094 81.946 1.00 58.38 C
ATOM 14 N9 G B1219 -106.321 94.260 80.758 1.00 58.90 N
ATOM 15 C8 G B1219 -107.306 93.857 79.906 1.00 58.90 C
ATOM 16 N7 G B1219 -106.847 93.132 78.925 1.00 58.90 N
ATOM 17 C5 G B1219 -105.484 93.073 79.159 1.00 58.90 C
ATOM 18 C6 G B1219 -104.471 92.432 78.425 1.00 58.90 C
ATOM 19 O6 G B1219 -104.592 91.764 77.386 1.00 58.90 O
ATOM 20 N1 G B1219 -103.233 92.641 79.031 1.00 58.90 N
ATOM 21 C2 G B1219 -103.008 93.362 80.180 1.00 58.90 C
ATOM 22 N2 G B1219 -101.748 93.449 80.612 1.00 58.90 N
ATOM 23 N3 G B1219 -103.950 93.966 80.864 1.00 58.90 N
ATOM 24 C4 G B1219 -105.146 93.770 80.290 1.00 58.90 C
ATOM 25 P G B1220 -105.783 99.671 80.436 1.00 73.13 P
ATOM 26 OP1 G B1220 -106.022 101.079 80.871 1.00 73.13 O
ATOM 27 OP2 G B1220 -106.357 99.216 79.150 1.00 73.13 O
ATOM 28 O5' G B1220 -104.227 99.348 80.463 1.00 73.13 O
TER
ATOM 2 P C A1318 -116.371 106.163 75.778 1.00 61.03 P
ATOM 3 OP1 C A1318 -117.186 104.928 75.982 1.00 61.03 O
ATOM 4 OP2 C A1318 -117.070 107.464 75.612 1.00 61.03 O
ATOM 5 O5' C A1318 -115.280 106.285 76.930 1.00 61.03 O
ATOM 6 C5' C A1318 -115.505 107.137 78.043 1.00 61.03 C
ATOM 7 C4' C A1318 -114.660 106.749 79.227 1.00 61.03 C
ATOM 8 O4' C A1318 -115.150 105.521 79.814 1.00 61.03 O
ATOM 9 C3' C A1318 -113.208 106.449 78.940 1.00 61.03 C
ATOM 10 O3' C A1318 -112.438 107.616 78.774 1.00 61.03 O
ATOM 11 C2' C A1318 -112.801 105.618 80.148 1.00 61.03 C
ATOM 12 O2' C A1318 -112.536 106.448 81.265 1.00 61.03 O
ATOM 13 C1' C A1318 -114.081 104.835 80.429 1.00 61.03 C
ATOM 14 N1 C A1318 -114.016 103.465 79.903 1.00 60.47 N
ATOM 15 C2 C A1318 -113.148 102.629 80.582 1.00 60.47 C
ATOM 16 O2 C A1318 -112.520 103.113 81.533 1.00 60.47 O
ATOM 17 N3 C A1318 -113.009 101.348 80.191 1.00 60.47 N
ATOM 18 C4 C A1318 -113.709 100.902 79.159 1.00 60.47 C
ATOM 19 N4 C A1318 -113.533 99.630 78.820 1.00 60.47 N
ATOM 20 C5 C A1318 -114.618 101.736 78.444 1.00 60.47 C
ATOM 21 C6 C A1318 -114.742 103.007 78.846 1.00 60.47 C
ATOM 22 P U A1319 -110.996 107.527 78.094 1.00 55.69 P
ATOM 23 OP1 U A1319 -110.312 108.811 78.368 1.00 55.69 O
ATOM 24 OP2 U A1319 -111.197 107.114 76.691 1.00 55.69 O
ATOM 25 O5' U A1319 -110.300 106.352 78.910 1.00 55.69 O
TER
ATOM 1 O3' G B1218 -111.614 95.739 80.127 1.00 55.80 O
ATOM 2 P G B1219 -110.701 96.703 79.224 1.00 58.38 P
ATOM 3 OP1 G B1219 -111.319 98.056 79.259 1.00 58.38 O
ATOM 4 OP2 G B1219 -110.524 96.027 77.910 1.00 58.38 O
ATOM 5 O5' G B1219 -109.317 96.718 80.021 1.00 58.38 O
ATOM 6 C5' G B1219 -109.243 97.253 81.335 1.00 58.38 C
ATOM 7 C4' G B1219 -107.946 96.892 82.006 1.00 58.38 C
ATOM 8 O4' G B1219 -107.812 95.455 82.071 1.00 58.38 O
ATOM 9 C3' G B1219 -106.684 97.357 81.306 1.00 58.38 C
ATOM 10 O3' G B1219 -106.373 98.710 81.586 1.00 58.38 O
ATOM 11 C2' G B1219 -105.645 96.378 81.823 1.00 58.38 C
ATOM 12 O2' G B1219 -105.198 96.752 83.115 1.00 58.38 O
ATOM 13 C1' G B1219 -106.460 95.094 81.946 1.00 58.38 C
ATOM 14 N9 G B1219 -106.321 94.260 80.758 1.00 58.90 N
ATOM 15 C8 G B1219 -107.306 93.857 79.906 1.00 58.90 C
ATOM 16 N7 G B1219 -106.847 93.132 78.925 1.00 58.90 N
ATOM 17 C5 G B1219 -105.484 93.073 79.159 1.00 58.90 C
ATOM 18 C6 G B1219 -104.471 92.432 78.425 1.00 58.90 C
ATOM 19 O6 G B1219 -104.592 91.764 77.386 1.00 58.90 O
ATOM 20 N1 G B1219 -103.233 92.641 79.031 1.00 58.90 N
ATOM 21 C2 G B1219 -103.008 93.362 80.180 1.00 58.90 C
ATOM 22 N2 G B1219 -101.748 93.449 80.612 1.00 58.90 N
ATOM 23 N3 G B1219 -103.950 93.966 80.864 1.00 58.90 N
ATOM 24 C4 G B1219 -105.146 93.770 80.290 1.00 58.90 C
ATOM 25 P G B1220 -105.783 99.671 80.436 1.00 73.13 P
ATOM 26 OP1 G B1220 -106.022 101.079 80.871 1.00 73.13 O
ATOM 27 OP2 G B1220 -106.357 99.216 79.150 1.00 73.13 O
ATOM 28 O5' G B1220 -104.227 99.348 80.463 1.00 73.13 O
TER
Atoms:
C2: (-113.148,102.629,80.582)
OP1: (-117.186,104.928,75.982)
OP2: (-117.070,107.464,75.612)
C4: (-113.709,100.902,79.159)
O5': (-115.280,106.285,76.930)
C3': (-113.208,106.449,78.940)
C1': (-114.081,104.835,80.429)
O4': (-115.150,105.521,79.814)
C5': (-115.505,107.137,78.043)
P: (-116.371,106.163,75.778)
O2: (-112.520,103.113,81.533)
C4': (-114.660,106.749,79.227)
C2': (-112.801,105.618,80.148)
O2': (-112.536,106.448,81.265)
N1: (-114.016,103.465,79.903)
N3: (-113.009,101.348,80.191)
N4: (-113.533,99.630,78.820)
C6: (-114.742,103.007,78.846)
C5: (-114.618,101.736,78.444)
O3': (-112.438,107.616,78.774)
OP1: (-117.186,104.928,75.982)
OP2: (-117.070,107.464,75.612)
C4: (-113.709,100.902,79.159)
O5': (-115.280,106.285,76.930)
C3': (-113.208,106.449,78.940)
C1': (-114.081,104.835,80.429)
O4': (-115.150,105.521,79.814)
C5': (-115.505,107.137,78.043)
P: (-116.371,106.163,75.778)
O2: (-112.520,103.113,81.533)
C4': (-114.660,106.749,79.227)
C2': (-112.801,105.618,80.148)
O2': (-112.536,106.448,81.265)
N1: (-114.016,103.465,79.903)
N3: (-113.009,101.348,80.191)
N4: (-113.533,99.630,78.820)
C6: (-114.742,103.007,78.846)
C5: (-114.618,101.736,78.444)
O3': (-112.438,107.616,78.774)
OP1: (-111.319,98.056,79.259)
OP2: (-110.524,96.027,77.910)
C3': (-106.684,97.357,81.306)
C1': (-106.460,95.094,81.946)
C5': (-109.243,97.253,81.335)
O6: (-104.592,91.764,77.386)
O4': (-107.812,95.455,82.071)
C8: (-107.306,93.857,79.906)
C2: (-103.008,93.362,80.180)
C6: (-104.471,92.432,78.425)
C5: (-105.484,93.073,79.159)
C4: (-105.146,93.770,80.290)
P: (-110.701,96.703,79.224)
C4': (-107.946,96.892,82.006)
C2': (-105.645,96.378,81.823)
O2': (-105.198,96.752,83.115)
N1: (-103.233,92.641,79.031)
N2: (-101.748,93.449,80.612)
N3: (-103.950,93.966,80.864)
N7: (-106.847,93.132,78.925)
N9: (-106.321,94.260,80.758)
O5': (-109.317,96.718,80.021)
O3': (-106.373,98.710,81.586)
OP2: (-110.524,96.027,77.910)
C3': (-106.684,97.357,81.306)
C1': (-106.460,95.094,81.946)
C5': (-109.243,97.253,81.335)
O6: (-104.592,91.764,77.386)
O4': (-107.812,95.455,82.071)
C8: (-107.306,93.857,79.906)
C2: (-103.008,93.362,80.180)
C6: (-104.471,92.432,78.425)
C5: (-105.484,93.073,79.159)
C4: (-105.146,93.770,80.290)
P: (-110.701,96.703,79.224)
C4': (-107.946,96.892,82.006)
C2': (-105.645,96.378,81.823)
O2': (-105.198,96.752,83.115)
N1: (-103.233,92.641,79.031)
N2: (-101.748,93.449,80.612)
N3: (-103.950,93.966,80.864)
N7: (-106.847,93.132,78.925)
N9: (-106.321,94.260,80.758)
O5': (-109.317,96.718,80.021)
O3': (-106.373,98.710,81.586)
Image (generated by PyMOL):