Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:911:912
Extra
PDB:
ATOM 1 O3' A A 10 54.250 40.444 107.659 1.00 49.55 O
ATOM 2 P C A 11 53.321 41.622 108.219 1.00 50.29 P
ATOM 3 OP1 C A 11 52.451 42.094 107.110 1.00 50.85 O
ATOM 4 OP2 C A 11 54.185 42.593 108.944 1.00 49.04 O
ATOM 5 O5' C A 11 52.385 40.887 109.276 1.00 51.68 O
ATOM 6 C5' C A 11 52.810 40.695 110.636 1.00 51.63 C
ATOM 7 C4' C A 11 52.318 39.367 111.154 1.00 51.33 C
ATOM 8 O4' C A 11 50.863 39.345 111.119 1.00 52.36 O
ATOM 9 C3' C A 11 52.776 38.138 110.376 1.00 50.60 C
ATOM 10 O3' C A 11 52.924 37.074 111.302 1.00 52.42 O
ATOM 11 C2' C A 11 51.594 37.877 109.448 1.00 51.10 C
ATOM 12 O2' C A 11 51.475 36.542 109.011 1.00 50.74 O
ATOM 13 C1' C A 11 50.427 38.237 110.359 1.00 52.57 C
ATOM 14 N1 C A 11 49.204 38.613 109.644 1.00 55.34 N
ATOM 15 C2 C A 11 48.115 37.736 109.664 1.00 58.50 C
ATOM 16 O2 C A 11 48.217 36.660 110.275 1.00 60.70 O
ATOM 17 N3 C A 11 46.977 38.082 109.016 1.00 60.17 N
ATOM 18 C4 C A 11 46.908 39.246 108.365 1.00 59.35 C
ATOM 19 N4 C A 11 45.770 39.547 107.740 1.00 61.07 N
ATOM 20 C5 C A 11 48.003 40.153 108.327 1.00 58.58 C
ATOM 21 C6 C A 11 49.120 39.800 108.973 1.00 57.08 C
ATOM 22 P A A 12 54.389 36.633 111.776 1.00 53.93 P
ATOM 23 OP1 A A 12 54.251 35.589 112.814 1.00 55.49 O
ATOM 24 OP2 A A 12 55.178 37.854 112.080 1.00 56.18 O
ATOM 25 O5' A A 12 54.990 35.956 110.473 1.00 51.97 O
TER
ATOM 1 O3' C B 11 52.924 37.074 111.302 1.00 52.42 O
ATOM 2 P A B 12 54.389 36.633 111.776 1.00 53.93 P
ATOM 3 OP1 A B 12 54.251 35.589 112.814 1.00 55.49 O
ATOM 4 OP2 A B 12 55.178 37.854 112.080 1.00 56.18 O
ATOM 5 O5' A B 12 54.990 35.956 110.473 1.00 51.97 O
ATOM 6 C5' A B 12 54.787 34.572 110.217 1.00 50.15 C
ATOM 7 C4' A B 12 55.509 34.173 108.964 1.00 50.32 C
ATOM 8 O4' A B 12 54.746 34.607 107.811 1.00 49.96 O
ATOM 9 C3' A B 12 56.907 34.760 108.799 1.00 49.25 C
ATOM 10 O3' A B 12 57.722 33.799 108.153 1.00 48.80 O
ATOM 11 C2' A B 12 56.659 35.927 107.850 1.00 50.48 C
ATOM 12 O2' A B 12 57.784 36.279 107.075 1.00 51.88 O
ATOM 13 C1' A B 12 55.588 35.332 106.947 1.00 50.88 C
ATOM 14 N9 A B 12 54.785 36.302 106.206 1.00 51.85 N
ATOM 15 C8 A B 12 53.673 36.995 106.616 1.00 51.84 C
ATOM 16 N7 A B 12 53.170 37.779 105.694 1.00 50.98 N
ATOM 17 C5 A B 12 54.010 37.594 104.607 1.00 52.31 C
ATOM 18 C6 A B 12 54.014 38.140 103.317 1.00 53.20 C
ATOM 19 N6 A B 12 53.107 39.020 102.890 1.00 53.52 N
ATOM 20 N1 A B 12 54.991 37.747 102.468 1.00 53.89 N
ATOM 21 C2 A B 12 55.899 36.861 102.903 1.00 53.61 C
ATOM 22 N3 A B 12 55.998 36.275 104.094 1.00 52.80 N
ATOM 23 C4 A B 12 55.012 36.691 104.909 1.00 52.13 C
ATOM 24 P G B 13 59.024 33.233 108.895 1.00 47.28 P
ATOM 25 OP1 G B 13 59.437 32.036 108.134 1.00 47.52 O
ATOM 26 OP2 G B 13 58.730 33.122 110.344 1.00 47.80 O
ATOM 27 O5' G B 13 60.135 34.362 108.685 1.00 50.45 O
TER
ATOM 2 P C A 11 53.321 41.622 108.219 1.00 50.29 P
ATOM 3 OP1 C A 11 52.451 42.094 107.110 1.00 50.85 O
ATOM 4 OP2 C A 11 54.185 42.593 108.944 1.00 49.04 O
ATOM 5 O5' C A 11 52.385 40.887 109.276 1.00 51.68 O
ATOM 6 C5' C A 11 52.810 40.695 110.636 1.00 51.63 C
ATOM 7 C4' C A 11 52.318 39.367 111.154 1.00 51.33 C
ATOM 8 O4' C A 11 50.863 39.345 111.119 1.00 52.36 O
ATOM 9 C3' C A 11 52.776 38.138 110.376 1.00 50.60 C
ATOM 10 O3' C A 11 52.924 37.074 111.302 1.00 52.42 O
ATOM 11 C2' C A 11 51.594 37.877 109.448 1.00 51.10 C
ATOM 12 O2' C A 11 51.475 36.542 109.011 1.00 50.74 O
ATOM 13 C1' C A 11 50.427 38.237 110.359 1.00 52.57 C
ATOM 14 N1 C A 11 49.204 38.613 109.644 1.00 55.34 N
ATOM 15 C2 C A 11 48.115 37.736 109.664 1.00 58.50 C
ATOM 16 O2 C A 11 48.217 36.660 110.275 1.00 60.70 O
ATOM 17 N3 C A 11 46.977 38.082 109.016 1.00 60.17 N
ATOM 18 C4 C A 11 46.908 39.246 108.365 1.00 59.35 C
ATOM 19 N4 C A 11 45.770 39.547 107.740 1.00 61.07 N
ATOM 20 C5 C A 11 48.003 40.153 108.327 1.00 58.58 C
ATOM 21 C6 C A 11 49.120 39.800 108.973 1.00 57.08 C
ATOM 22 P A A 12 54.389 36.633 111.776 1.00 53.93 P
ATOM 23 OP1 A A 12 54.251 35.589 112.814 1.00 55.49 O
ATOM 24 OP2 A A 12 55.178 37.854 112.080 1.00 56.18 O
ATOM 25 O5' A A 12 54.990 35.956 110.473 1.00 51.97 O
TER
ATOM 1 O3' C B 11 52.924 37.074 111.302 1.00 52.42 O
ATOM 2 P A B 12 54.389 36.633 111.776 1.00 53.93 P
ATOM 3 OP1 A B 12 54.251 35.589 112.814 1.00 55.49 O
ATOM 4 OP2 A B 12 55.178 37.854 112.080 1.00 56.18 O
ATOM 5 O5' A B 12 54.990 35.956 110.473 1.00 51.97 O
ATOM 6 C5' A B 12 54.787 34.572 110.217 1.00 50.15 C
ATOM 7 C4' A B 12 55.509 34.173 108.964 1.00 50.32 C
ATOM 8 O4' A B 12 54.746 34.607 107.811 1.00 49.96 O
ATOM 9 C3' A B 12 56.907 34.760 108.799 1.00 49.25 C
ATOM 10 O3' A B 12 57.722 33.799 108.153 1.00 48.80 O
ATOM 11 C2' A B 12 56.659 35.927 107.850 1.00 50.48 C
ATOM 12 O2' A B 12 57.784 36.279 107.075 1.00 51.88 O
ATOM 13 C1' A B 12 55.588 35.332 106.947 1.00 50.88 C
ATOM 14 N9 A B 12 54.785 36.302 106.206 1.00 51.85 N
ATOM 15 C8 A B 12 53.673 36.995 106.616 1.00 51.84 C
ATOM 16 N7 A B 12 53.170 37.779 105.694 1.00 50.98 N
ATOM 17 C5 A B 12 54.010 37.594 104.607 1.00 52.31 C
ATOM 18 C6 A B 12 54.014 38.140 103.317 1.00 53.20 C
ATOM 19 N6 A B 12 53.107 39.020 102.890 1.00 53.52 N
ATOM 20 N1 A B 12 54.991 37.747 102.468 1.00 53.89 N
ATOM 21 C2 A B 12 55.899 36.861 102.903 1.00 53.61 C
ATOM 22 N3 A B 12 55.998 36.275 104.094 1.00 52.80 N
ATOM 23 C4 A B 12 55.012 36.691 104.909 1.00 52.13 C
ATOM 24 P G B 13 59.024 33.233 108.895 1.00 47.28 P
ATOM 25 OP1 G B 13 59.437 32.036 108.134 1.00 47.52 O
ATOM 26 OP2 G B 13 58.730 33.122 110.344 1.00 47.80 O
ATOM 27 O5' G B 13 60.135 34.362 108.685 1.00 50.45 O
TER
Atoms:
C2: (48.115,37.736,109.664)
OP1: (52.451,42.094,107.110)
OP2: (54.185,42.593,108.944)
C4: (46.908,39.246,108.365)
O5': (52.385,40.887,109.276)
C3': (52.776,38.138,110.376)
C1': (50.427,38.237,110.359)
O4': (50.863,39.345,111.119)
C5': (52.810,40.695,110.636)
P: (53.321,41.622,108.219)
O2: (48.217,36.660,110.275)
C4': (52.318,39.367,111.154)
C2': (51.594,37.877,109.448)
O2': (51.475,36.542,109.011)
N1: (49.204,38.613,109.644)
N3: (46.977,38.082,109.016)
N4: (45.770,39.547,107.740)
C6: (49.120,39.800,108.973)
C5: (48.003,40.153,108.327)
O3': (52.924,37.074,111.302)
OP1: (52.451,42.094,107.110)
OP2: (54.185,42.593,108.944)
C4: (46.908,39.246,108.365)
O5': (52.385,40.887,109.276)
C3': (52.776,38.138,110.376)
C1': (50.427,38.237,110.359)
O4': (50.863,39.345,111.119)
C5': (52.810,40.695,110.636)
P: (53.321,41.622,108.219)
O2: (48.217,36.660,110.275)
C4': (52.318,39.367,111.154)
C2': (51.594,37.877,109.448)
O2': (51.475,36.542,109.011)
N1: (49.204,38.613,109.644)
N3: (46.977,38.082,109.016)
N4: (45.770,39.547,107.740)
C6: (49.120,39.800,108.973)
C5: (48.003,40.153,108.327)
O3': (52.924,37.074,111.302)
OP1: (54.251,35.589,112.814)
OP2: (55.178,37.854,112.080)
C3': (56.907,34.760,108.799)
C1': (55.588,35.332,106.947)
C5': (54.787,34.572,110.217)
O4': (54.746,34.607,107.811)
C8: (53.673,36.995,106.616)
O2': (57.784,36.279,107.075)
C6: (54.014,38.140,103.317)
C5: (54.010,37.594,104.607)
C4: (55.012,36.691,104.909)
P: (54.389,36.633,111.776)
C4': (55.509,34.173,108.964)
C2': (56.659,35.927,107.850)
C2: (55.899,36.861,102.903)
N1: (54.991,37.747,102.468)
N3: (55.998,36.275,104.094)
N6: (53.107,39.020,102.890)
N7: (53.170,37.779,105.694)
N9: (54.785,36.302,106.206)
O5': (54.990,35.956,110.473)
O3': (57.722,33.799,108.153)
OP2: (55.178,37.854,112.080)
C3': (56.907,34.760,108.799)
C1': (55.588,35.332,106.947)
C5': (54.787,34.572,110.217)
O4': (54.746,34.607,107.811)
C8: (53.673,36.995,106.616)
O2': (57.784,36.279,107.075)
C6: (54.014,38.140,103.317)
C5: (54.010,37.594,104.607)
C4: (55.012,36.691,104.909)
P: (54.389,36.633,111.776)
C4': (55.509,34.173,108.964)
C2': (56.659,35.927,107.850)
C2: (55.899,36.861,102.903)
N1: (54.991,37.747,102.468)
N3: (55.998,36.275,104.094)
N6: (53.107,39.020,102.890)
N7: (53.170,37.779,105.694)
N9: (54.785,36.302,106.206)
O5': (54.990,35.956,110.473)
O3': (57.722,33.799,108.153)
Image (generated by PyMOL):