Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:911:912
Extra
PDB:
ATOM 1 O3' A A 10 54.275 40.537 107.693 1.00 58.40 O
ATOM 2 P C A 11 53.338 41.697 108.284 1.00 61.41 P
ATOM 3 OP1 C A 11 52.421 42.191 107.216 1.00 61.34 O
ATOM 4 OP2 C A 11 54.207 42.655 109.011 1.00 59.63 O
ATOM 5 O5' C A 11 52.424 40.942 109.341 1.00 62.92 O
ATOM 6 C5' C A 11 52.876 40.720 110.682 1.00 63.06 C
ATOM 7 C4' C A 11 52.394 39.383 111.170 1.00 61.78 C
ATOM 8 O4' C A 11 50.940 39.356 111.131 1.00 61.75 O
ATOM 9 C3' C A 11 52.854 38.188 110.347 1.00 61.25 C
ATOM 10 O3' C A 11 52.994 37.101 111.240 1.00 62.76 O
ATOM 11 C2' C A 11 51.679 37.959 109.407 1.00 61.60 C
ATOM 12 O2' C A 11 51.583 36.635 108.930 1.00 61.24 O
ATOM 13 C1' C A 11 50.512 38.278 110.331 1.00 61.69 C
ATOM 14 N1 C A 11 49.279 38.670 109.647 1.00 63.02 N
ATOM 15 C2 C A 11 48.229 37.755 109.591 1.00 65.79 C
ATOM 16 O2 C A 11 48.384 36.627 110.093 1.00 67.04 O
ATOM 17 N3 C A 11 47.070 38.114 108.992 1.00 66.90 N
ATOM 18 C4 C A 11 46.947 39.330 108.458 1.00 66.42 C
ATOM 19 N4 C A 11 45.783 39.647 107.890 1.00 67.29 N
ATOM 20 C5 C A 11 48.011 40.276 108.486 1.00 65.95 C
ATOM 21 C6 C A 11 49.148 39.908 109.085 1.00 64.16 C
ATOM 22 P A A 12 54.449 36.706 111.772 1.00 64.65 P
ATOM 23 OP1 A A 12 54.301 35.724 112.871 1.00 65.64 O
ATOM 24 OP2 A A 12 55.199 37.962 112.021 1.00 66.21 O
ATOM 25 O5' A A 12 55.088 35.979 110.511 1.00 62.68 O
TER
ATOM 1 O3' C B 11 52.994 37.101 111.240 1.00 62.76 O
ATOM 2 P A B 12 54.449 36.706 111.772 1.00 64.65 P
ATOM 3 OP1 A B 12 54.301 35.724 112.871 1.00 65.64 O
ATOM 4 OP2 A B 12 55.199 37.962 112.021 1.00 66.21 O
ATOM 5 O5' A B 12 55.088 35.979 110.511 1.00 62.68 O
ATOM 6 C5' A B 12 54.844 34.591 110.264 1.00 58.67 C
ATOM 7 C4' A B 12 55.553 34.164 109.009 1.00 57.60 C
ATOM 8 O4' A B 12 54.789 34.590 107.849 1.00 57.04 O
ATOM 9 C3' A B 12 56.953 34.742 108.834 1.00 57.39 C
ATOM 10 O3' A B 12 57.785 33.780 108.192 1.00 56.62 O
ATOM 11 C2' A B 12 56.688 35.929 107.909 1.00 57.56 C
ATOM 12 O2' A B 12 57.791 36.360 107.145 1.00 59.67 O
ATOM 13 C1' A B 12 55.620 35.344 106.995 1.00 57.48 C
ATOM 14 N9 A B 12 54.815 36.346 106.297 1.00 57.67 N
ATOM 15 C8 A B 12 53.757 37.089 106.766 1.00 57.77 C
ATOM 16 N7 A B 12 53.261 37.920 105.881 1.00 56.00 N
ATOM 17 C5 A B 12 54.039 37.706 104.754 1.00 56.41 C
ATOM 18 C6 A B 12 54.019 38.279 103.479 1.00 56.75 C
ATOM 19 N6 A B 12 53.152 39.223 103.114 1.00 57.15 N
ATOM 20 N1 A B 12 54.931 37.846 102.578 1.00 57.15 N
ATOM 21 C2 A B 12 55.801 36.897 102.953 1.00 57.31 C
ATOM 22 N3 A B 12 55.918 36.279 104.127 1.00 56.57 N
ATOM 23 C4 A B 12 54.997 36.737 104.993 1.00 56.83 C
ATOM 24 P G B 13 59.092 33.219 108.944 1.00 56.36 P
ATOM 25 OP1 G B 13 59.512 32.025 108.182 1.00 58.02 O
ATOM 26 OP2 G B 13 58.823 33.103 110.397 1.00 55.41 O
ATOM 27 O5' G B 13 60.201 34.349 108.738 1.00 59.35 O
TER
ATOM 2 P C A 11 53.338 41.697 108.284 1.00 61.41 P
ATOM 3 OP1 C A 11 52.421 42.191 107.216 1.00 61.34 O
ATOM 4 OP2 C A 11 54.207 42.655 109.011 1.00 59.63 O
ATOM 5 O5' C A 11 52.424 40.942 109.341 1.00 62.92 O
ATOM 6 C5' C A 11 52.876 40.720 110.682 1.00 63.06 C
ATOM 7 C4' C A 11 52.394 39.383 111.170 1.00 61.78 C
ATOM 8 O4' C A 11 50.940 39.356 111.131 1.00 61.75 O
ATOM 9 C3' C A 11 52.854 38.188 110.347 1.00 61.25 C
ATOM 10 O3' C A 11 52.994 37.101 111.240 1.00 62.76 O
ATOM 11 C2' C A 11 51.679 37.959 109.407 1.00 61.60 C
ATOM 12 O2' C A 11 51.583 36.635 108.930 1.00 61.24 O
ATOM 13 C1' C A 11 50.512 38.278 110.331 1.00 61.69 C
ATOM 14 N1 C A 11 49.279 38.670 109.647 1.00 63.02 N
ATOM 15 C2 C A 11 48.229 37.755 109.591 1.00 65.79 C
ATOM 16 O2 C A 11 48.384 36.627 110.093 1.00 67.04 O
ATOM 17 N3 C A 11 47.070 38.114 108.992 1.00 66.90 N
ATOM 18 C4 C A 11 46.947 39.330 108.458 1.00 66.42 C
ATOM 19 N4 C A 11 45.783 39.647 107.890 1.00 67.29 N
ATOM 20 C5 C A 11 48.011 40.276 108.486 1.00 65.95 C
ATOM 21 C6 C A 11 49.148 39.908 109.085 1.00 64.16 C
ATOM 22 P A A 12 54.449 36.706 111.772 1.00 64.65 P
ATOM 23 OP1 A A 12 54.301 35.724 112.871 1.00 65.64 O
ATOM 24 OP2 A A 12 55.199 37.962 112.021 1.00 66.21 O
ATOM 25 O5' A A 12 55.088 35.979 110.511 1.00 62.68 O
TER
ATOM 1 O3' C B 11 52.994 37.101 111.240 1.00 62.76 O
ATOM 2 P A B 12 54.449 36.706 111.772 1.00 64.65 P
ATOM 3 OP1 A B 12 54.301 35.724 112.871 1.00 65.64 O
ATOM 4 OP2 A B 12 55.199 37.962 112.021 1.00 66.21 O
ATOM 5 O5' A B 12 55.088 35.979 110.511 1.00 62.68 O
ATOM 6 C5' A B 12 54.844 34.591 110.264 1.00 58.67 C
ATOM 7 C4' A B 12 55.553 34.164 109.009 1.00 57.60 C
ATOM 8 O4' A B 12 54.789 34.590 107.849 1.00 57.04 O
ATOM 9 C3' A B 12 56.953 34.742 108.834 1.00 57.39 C
ATOM 10 O3' A B 12 57.785 33.780 108.192 1.00 56.62 O
ATOM 11 C2' A B 12 56.688 35.929 107.909 1.00 57.56 C
ATOM 12 O2' A B 12 57.791 36.360 107.145 1.00 59.67 O
ATOM 13 C1' A B 12 55.620 35.344 106.995 1.00 57.48 C
ATOM 14 N9 A B 12 54.815 36.346 106.297 1.00 57.67 N
ATOM 15 C8 A B 12 53.757 37.089 106.766 1.00 57.77 C
ATOM 16 N7 A B 12 53.261 37.920 105.881 1.00 56.00 N
ATOM 17 C5 A B 12 54.039 37.706 104.754 1.00 56.41 C
ATOM 18 C6 A B 12 54.019 38.279 103.479 1.00 56.75 C
ATOM 19 N6 A B 12 53.152 39.223 103.114 1.00 57.15 N
ATOM 20 N1 A B 12 54.931 37.846 102.578 1.00 57.15 N
ATOM 21 C2 A B 12 55.801 36.897 102.953 1.00 57.31 C
ATOM 22 N3 A B 12 55.918 36.279 104.127 1.00 56.57 N
ATOM 23 C4 A B 12 54.997 36.737 104.993 1.00 56.83 C
ATOM 24 P G B 13 59.092 33.219 108.944 1.00 56.36 P
ATOM 25 OP1 G B 13 59.512 32.025 108.182 1.00 58.02 O
ATOM 26 OP2 G B 13 58.823 33.103 110.397 1.00 55.41 O
ATOM 27 O5' G B 13 60.201 34.349 108.738 1.00 59.35 O
TER
Atoms:
C2: (48.229,37.755,109.591)
OP1: (52.421,42.191,107.216)
OP2: (54.207,42.655,109.011)
C4: (46.947,39.330,108.458)
O5': (52.424,40.942,109.341)
C3': (52.854,38.188,110.347)
C1': (50.512,38.278,110.331)
O4': (50.940,39.356,111.131)
C5': (52.876,40.720,110.682)
P: (53.338,41.697,108.284)
O2: (48.384,36.627,110.093)
C4': (52.394,39.383,111.170)
C2': (51.679,37.959,109.407)
O2': (51.583,36.635,108.930)
N1: (49.279,38.670,109.647)
N3: (47.070,38.114,108.992)
N4: (45.783,39.647,107.890)
C6: (49.148,39.908,109.085)
C5: (48.011,40.276,108.486)
O3': (52.994,37.101,111.240)
OP1: (52.421,42.191,107.216)
OP2: (54.207,42.655,109.011)
C4: (46.947,39.330,108.458)
O5': (52.424,40.942,109.341)
C3': (52.854,38.188,110.347)
C1': (50.512,38.278,110.331)
O4': (50.940,39.356,111.131)
C5': (52.876,40.720,110.682)
P: (53.338,41.697,108.284)
O2: (48.384,36.627,110.093)
C4': (52.394,39.383,111.170)
C2': (51.679,37.959,109.407)
O2': (51.583,36.635,108.930)
N1: (49.279,38.670,109.647)
N3: (47.070,38.114,108.992)
N4: (45.783,39.647,107.890)
C6: (49.148,39.908,109.085)
C5: (48.011,40.276,108.486)
O3': (52.994,37.101,111.240)
OP1: (54.301,35.724,112.871)
OP2: (55.199,37.962,112.021)
C3': (56.953,34.742,108.834)
C1': (55.620,35.344,106.995)
C5': (54.844,34.591,110.264)
O4': (54.789,34.590,107.849)
C8: (53.757,37.089,106.766)
O2': (57.791,36.360,107.145)
C6: (54.019,38.279,103.479)
C5: (54.039,37.706,104.754)
C4: (54.997,36.737,104.993)
P: (54.449,36.706,111.772)
C4': (55.553,34.164,109.009)
C2': (56.688,35.929,107.909)
C2: (55.801,36.897,102.953)
N1: (54.931,37.846,102.578)
N3: (55.918,36.279,104.127)
N6: (53.152,39.223,103.114)
N7: (53.261,37.920,105.881)
N9: (54.815,36.346,106.297)
O5': (55.088,35.979,110.511)
O3': (57.785,33.780,108.192)
OP2: (55.199,37.962,112.021)
C3': (56.953,34.742,108.834)
C1': (55.620,35.344,106.995)
C5': (54.844,34.591,110.264)
O4': (54.789,34.590,107.849)
C8: (53.757,37.089,106.766)
O2': (57.791,36.360,107.145)
C6: (54.019,38.279,103.479)
C5: (54.039,37.706,104.754)
C4: (54.997,36.737,104.993)
P: (54.449,36.706,111.772)
C4': (55.553,34.164,109.009)
C2': (56.688,35.929,107.909)
C2: (55.801,36.897,102.953)
N1: (54.931,37.846,102.578)
N3: (55.918,36.279,104.127)
N6: (53.152,39.223,103.114)
N7: (53.261,37.920,105.881)
N9: (54.815,36.346,106.297)
O5': (55.088,35.979,110.511)
O3': (57.785,33.780,108.192)
Image (generated by PyMOL):