Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2008:A2009
Extra
PDB:
ATOM 1 O3' U A2007 -8.766 183.477 123.813 1.00 0.79 O
ATOM 2 P U A2008 -8.232 183.525 122.300 1.00 4.00 P
ATOM 3 OP1 U A2008 -7.581 182.228 121.979 1.00 26.78 O
ATOM 4 OP2 U A2008 -7.429 184.774 122.197 1.00 26.78 O
ATOM 5 O5' U A2008 -9.575 183.676 121.447 1.00 11.82 O
ATOM 6 C5' U A2008 -9.584 184.448 120.235 1.00 11.82 C
ATOM 7 C4' U A2008 -10.890 184.283 119.513 1.00 11.82 C
ATOM 8 O4' U A2008 -11.016 182.920 119.044 1.00 11.82 O
ATOM 9 C3' U A2008 -12.135 184.569 120.342 1.00 11.82 C
ATOM 10 O3' U A2008 -13.153 185.105 119.493 1.00 11.82 O
ATOM 11 C2' U A2008 -12.604 183.173 120.734 1.00 11.82 C
ATOM 12 O2' U A2008 -13.995 183.095 120.954 1.00 11.82 O
ATOM 13 C1' U A2008 -12.258 182.391 119.470 1.00 11.82 C
ATOM 14 N1 U A2008 -12.158 180.931 119.647 1.00 33.76 N
ATOM 15 C2 U A2008 -10.977 180.408 120.131 1.00 33.76 C
ATOM 16 O2 U A2008 -10.004 181.101 120.380 1.00 33.76 O
ATOM 17 N3 U A2008 -10.972 179.049 120.312 1.00 33.76 N
ATOM 18 C4 U A2008 -11.995 178.181 120.057 1.00 33.76 C
ATOM 19 O4 U A2008 -11.841 176.984 120.309 1.00 33.76 O
ATOM 20 C5 U A2008 -13.182 178.792 119.536 1.00 33.76 C
ATOM 21 C6 U A2008 -13.222 180.111 119.351 1.00 33.76 C
ATOM 22 P G A2009 -13.035 186.601 118.939 1.00 4.95 P
ATOM 23 OP1 G A2009 -12.584 187.511 120.033 1.00 25.51 O
ATOM 24 OP2 G A2009 -14.302 186.884 118.222 1.00 25.54 O
ATOM 25 O5' G A2009 -11.817 186.506 117.921 1.00 17.74 O
TER
ATOM 1 O3' U B2008 -13.153 185.105 119.493 1.00 11.82 O
ATOM 2 P G B2009 -13.035 186.601 118.939 1.00 4.95 P
ATOM 3 OP1 G B2009 -12.584 187.511 120.033 1.00 25.51 O
ATOM 4 OP2 G B2009 -14.302 186.884 118.222 1.00 25.54 O
ATOM 5 O5' G B2009 -11.817 186.506 117.921 1.00 17.74 O
ATOM 6 C5' G B2009 -11.941 185.746 116.726 1.00 17.74 C
ATOM 7 C4' G B2009 -10.930 186.203 115.718 1.00 17.74 C
ATOM 8 O4' G B2009 -9.843 185.238 115.653 1.00 17.74 O
ATOM 9 C3' G B2009 -11.481 186.255 114.312 1.00 17.74 C
ATOM 10 O3' G B2009 -12.106 187.500 114.079 1.00 17.74 O
ATOM 11 C2' G B2009 -10.242 186.020 113.466 1.00 17.74 C
ATOM 12 O2' G B2009 -9.450 187.181 113.364 1.00 17.74 O
ATOM 13 C1' G B2009 -9.507 184.968 114.298 1.00 17.74 C
ATOM 14 N9 G B2009 -10.009 183.633 113.965 1.00 26.63 N
ATOM 15 C8 G B2009 -10.916 182.893 114.687 1.00 26.62 C
ATOM 16 N7 G B2009 -11.252 181.779 114.103 1.00 26.60 N
ATOM 17 C5 G B2009 -10.514 181.771 112.935 1.00 26.60 C
ATOM 18 C6 G B2009 -10.487 180.833 111.895 1.00 26.78 C
ATOM 19 O6 G B2009 -11.140 179.797 111.790 1.00 26.81 O
ATOM 20 N1 G B2009 -9.597 181.198 110.893 1.00 26.72 N
ATOM 21 C2 G B2009 -8.839 182.336 110.895 1.00 26.63 C
ATOM 22 N2 G B2009 -8.043 182.512 109.834 1.00 26.65 N
ATOM 23 N3 G B2009 -8.861 183.236 111.866 1.00 26.52 N
ATOM 24 C4 G B2009 -9.718 182.892 112.846 1.00 26.49 C
ATOM 25 P G B2010 -12.890 187.751 112.701 1.00 23.98 P
ATOM 26 OP1 G B2010 -13.546 189.079 112.792 1.00 37.34 O
ATOM 27 OP2 G B2010 -13.702 186.566 112.319 1.00 37.36 O
ATOM 28 O5' G B2010 -11.696 187.885 111.674 1.00 17.26 O
TER
ATOM 2 P U A2008 -8.232 183.525 122.300 1.00 4.00 P
ATOM 3 OP1 U A2008 -7.581 182.228 121.979 1.00 26.78 O
ATOM 4 OP2 U A2008 -7.429 184.774 122.197 1.00 26.78 O
ATOM 5 O5' U A2008 -9.575 183.676 121.447 1.00 11.82 O
ATOM 6 C5' U A2008 -9.584 184.448 120.235 1.00 11.82 C
ATOM 7 C4' U A2008 -10.890 184.283 119.513 1.00 11.82 C
ATOM 8 O4' U A2008 -11.016 182.920 119.044 1.00 11.82 O
ATOM 9 C3' U A2008 -12.135 184.569 120.342 1.00 11.82 C
ATOM 10 O3' U A2008 -13.153 185.105 119.493 1.00 11.82 O
ATOM 11 C2' U A2008 -12.604 183.173 120.734 1.00 11.82 C
ATOM 12 O2' U A2008 -13.995 183.095 120.954 1.00 11.82 O
ATOM 13 C1' U A2008 -12.258 182.391 119.470 1.00 11.82 C
ATOM 14 N1 U A2008 -12.158 180.931 119.647 1.00 33.76 N
ATOM 15 C2 U A2008 -10.977 180.408 120.131 1.00 33.76 C
ATOM 16 O2 U A2008 -10.004 181.101 120.380 1.00 33.76 O
ATOM 17 N3 U A2008 -10.972 179.049 120.312 1.00 33.76 N
ATOM 18 C4 U A2008 -11.995 178.181 120.057 1.00 33.76 C
ATOM 19 O4 U A2008 -11.841 176.984 120.309 1.00 33.76 O
ATOM 20 C5 U A2008 -13.182 178.792 119.536 1.00 33.76 C
ATOM 21 C6 U A2008 -13.222 180.111 119.351 1.00 33.76 C
ATOM 22 P G A2009 -13.035 186.601 118.939 1.00 4.95 P
ATOM 23 OP1 G A2009 -12.584 187.511 120.033 1.00 25.51 O
ATOM 24 OP2 G A2009 -14.302 186.884 118.222 1.00 25.54 O
ATOM 25 O5' G A2009 -11.817 186.506 117.921 1.00 17.74 O
TER
ATOM 1 O3' U B2008 -13.153 185.105 119.493 1.00 11.82 O
ATOM 2 P G B2009 -13.035 186.601 118.939 1.00 4.95 P
ATOM 3 OP1 G B2009 -12.584 187.511 120.033 1.00 25.51 O
ATOM 4 OP2 G B2009 -14.302 186.884 118.222 1.00 25.54 O
ATOM 5 O5' G B2009 -11.817 186.506 117.921 1.00 17.74 O
ATOM 6 C5' G B2009 -11.941 185.746 116.726 1.00 17.74 C
ATOM 7 C4' G B2009 -10.930 186.203 115.718 1.00 17.74 C
ATOM 8 O4' G B2009 -9.843 185.238 115.653 1.00 17.74 O
ATOM 9 C3' G B2009 -11.481 186.255 114.312 1.00 17.74 C
ATOM 10 O3' G B2009 -12.106 187.500 114.079 1.00 17.74 O
ATOM 11 C2' G B2009 -10.242 186.020 113.466 1.00 17.74 C
ATOM 12 O2' G B2009 -9.450 187.181 113.364 1.00 17.74 O
ATOM 13 C1' G B2009 -9.507 184.968 114.298 1.00 17.74 C
ATOM 14 N9 G B2009 -10.009 183.633 113.965 1.00 26.63 N
ATOM 15 C8 G B2009 -10.916 182.893 114.687 1.00 26.62 C
ATOM 16 N7 G B2009 -11.252 181.779 114.103 1.00 26.60 N
ATOM 17 C5 G B2009 -10.514 181.771 112.935 1.00 26.60 C
ATOM 18 C6 G B2009 -10.487 180.833 111.895 1.00 26.78 C
ATOM 19 O6 G B2009 -11.140 179.797 111.790 1.00 26.81 O
ATOM 20 N1 G B2009 -9.597 181.198 110.893 1.00 26.72 N
ATOM 21 C2 G B2009 -8.839 182.336 110.895 1.00 26.63 C
ATOM 22 N2 G B2009 -8.043 182.512 109.834 1.00 26.65 N
ATOM 23 N3 G B2009 -8.861 183.236 111.866 1.00 26.52 N
ATOM 24 C4 G B2009 -9.718 182.892 112.846 1.00 26.49 C
ATOM 25 P G B2010 -12.890 187.751 112.701 1.00 23.98 P
ATOM 26 OP1 G B2010 -13.546 189.079 112.792 1.00 37.34 O
ATOM 27 OP2 G B2010 -13.702 186.566 112.319 1.00 37.36 O
ATOM 28 O5' G B2010 -11.696 187.885 111.674 1.00 17.26 O
TER
Atoms:
C4: (-11.995,178.181,120.057)
N3: (-10.972,179.049,120.312)
OP1: (-7.581,182.228,121.979)
OP2: (-7.429,184.774,122.197)
C2: (-10.977,180.408,120.131)
C1': (-12.258,182.391,119.470)
C3': (-12.135,184.569,120.342)
O5': (-9.575,183.676,121.447)
O4': (-11.016,182.920,119.044)
C5': (-9.584,184.448,120.235)
P: (-8.232,183.525,122.300)
C4': (-10.890,184.283,119.513)
C2': (-12.604,183.173,120.734)
O2': (-13.995,183.095,120.954)
N1: (-12.158,180.931,119.647)
O4: (-11.841,176.984,120.309)
O2: (-10.004,181.101,120.380)
C6: (-13.222,180.111,119.351)
C5: (-13.182,178.792,119.536)
O3': (-13.153,185.105,119.493)
N3: (-10.972,179.049,120.312)
OP1: (-7.581,182.228,121.979)
OP2: (-7.429,184.774,122.197)
C2: (-10.977,180.408,120.131)
C1': (-12.258,182.391,119.470)
C3': (-12.135,184.569,120.342)
O5': (-9.575,183.676,121.447)
O4': (-11.016,182.920,119.044)
C5': (-9.584,184.448,120.235)
P: (-8.232,183.525,122.300)
C4': (-10.890,184.283,119.513)
C2': (-12.604,183.173,120.734)
O2': (-13.995,183.095,120.954)
N1: (-12.158,180.931,119.647)
O4: (-11.841,176.984,120.309)
O2: (-10.004,181.101,120.380)
C6: (-13.222,180.111,119.351)
C5: (-13.182,178.792,119.536)
O3': (-13.153,185.105,119.493)
OP1: (-12.584,187.511,120.033)
OP2: (-14.302,186.884,118.222)
C3': (-11.481,186.255,114.312)
C1': (-9.507,184.968,114.298)
C5': (-11.941,185.746,116.726)
O6: (-11.140,179.797,111.790)
O4': (-9.843,185.238,115.653)
C8: (-10.916,182.893,114.687)
C2: (-8.839,182.336,110.895)
C6: (-10.487,180.833,111.895)
C5: (-10.514,181.771,112.935)
C4: (-9.718,182.892,112.846)
P: (-13.035,186.601,118.939)
C4': (-10.930,186.203,115.718)
C2': (-10.242,186.020,113.466)
O2': (-9.450,187.181,113.364)
N1: (-9.597,181.198,110.893)
N2: (-8.043,182.512,109.834)
N3: (-8.861,183.236,111.866)
N7: (-11.252,181.779,114.103)
N9: (-10.009,183.633,113.965)
O5': (-11.817,186.506,117.921)
O3': (-12.106,187.500,114.079)
OP2: (-14.302,186.884,118.222)
C3': (-11.481,186.255,114.312)
C1': (-9.507,184.968,114.298)
C5': (-11.941,185.746,116.726)
O6: (-11.140,179.797,111.790)
O4': (-9.843,185.238,115.653)
C8: (-10.916,182.893,114.687)
C2: (-8.839,182.336,110.895)
C6: (-10.487,180.833,111.895)
C5: (-10.514,181.771,112.935)
C4: (-9.718,182.892,112.846)
P: (-13.035,186.601,118.939)
C4': (-10.930,186.203,115.718)
C2': (-10.242,186.020,113.466)
O2': (-9.450,187.181,113.364)
N1: (-9.597,181.198,110.893)
N2: (-8.043,182.512,109.834)
N3: (-8.861,183.236,111.866)
N7: (-11.252,181.779,114.103)
N9: (-10.009,183.633,113.965)
O5': (-11.817,186.506,117.921)
O3': (-12.106,187.500,114.079)
Image (generated by PyMOL):