Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A454:A472
Extra
PDB:
ATOM 1 O3' A A 453 -41.829 -83.417 42.953 1.00 0.01 O
ATOM 2 P C A 454 -40.663 -82.548 43.628 1.00 0.13 P
ATOM 3 OP1 C A 454 -39.982 -83.448 44.593 1.00 0.13 O
ATOM 4 OP2 C A 454 -41.253 -81.278 44.121 1.00 0.13 O
ATOM 5 O5' C A 454 -39.708 -82.258 42.403 1.00 0.13 O
ATOM 6 C5' C A 454 -38.973 -83.314 41.824 1.00 0.13 C
ATOM 7 C4' C A 454 -38.216 -82.865 40.615 1.00 0.13 C
ATOM 8 O4' C A 454 -38.965 -83.217 39.422 1.00 0.13 O
ATOM 9 C3' C A 454 -37.950 -81.383 40.523 1.00 0.13 C
ATOM 10 O3' C A 454 -36.682 -81.203 39.929 1.00 0.13 O
ATOM 11 C2' C A 454 -39.034 -80.890 39.563 1.00 0.13 C
ATOM 12 O2' C A 454 -38.706 -79.707 38.853 1.00 0.13 O
ATOM 13 C1' C A 454 -39.172 -82.077 38.627 1.00 0.13 C
ATOM 14 N1 C A 454 -40.485 -82.205 38.012 1.00 0.01 N
ATOM 15 C2 C A 454 -40.530 -82.893 36.840 1.00 0.01 C
ATOM 16 O2 C A 454 -39.486 -83.337 36.407 1.00 0.01 O
ATOM 17 N3 C A 454 -41.670 -83.070 36.182 1.00 0.01 N
ATOM 18 C4 C A 454 -42.763 -82.571 36.683 1.00 0.01 C
ATOM 19 N4 C A 454 -43.850 -82.794 35.983 1.00 0.01 N
ATOM 20 C5 C A 454 -42.776 -81.857 37.904 1.00 0.01 C
ATOM 21 C6 C A 454 -41.613 -81.698 38.535 1.00 0.01 C
ATOM 22 P C A 455 -35.458 -80.688 40.816 1.00 2.73 P
ATOM 23 OP1 C A 455 -34.208 -81.295 40.235 1.00 2.73 O
ATOM 24 OP2 C A 455 -35.814 -80.950 42.241 1.00 2.73 O
ATOM 25 O5' C A 455 -35.477 -79.128 40.543 1.00 2.73 O
TER
ATOM 1 O3' A B 471 -43.179 -84.713 31.843 1.00 0.01 O
ATOM 2 P G B 472 -43.933 -85.731 32.841 1.00 0.01 P
ATOM 3 OP1 G B 472 -44.656 -86.688 32.015 1.00 0.01 O
ATOM 4 OP2 G B 472 -44.686 -84.937 33.799 1.00 0.01 O
ATOM 5 O5' G B 472 -42.735 -86.450 33.583 1.00 0.01 O
ATOM 6 C5' G B 472 -41.939 -85.759 34.524 1.00 0.01 C
ATOM 7 C4' G B 472 -41.473 -86.676 35.613 1.00 0.01 C
ATOM 8 O4' G B 472 -42.402 -86.624 36.720 1.00 0.01 O
ATOM 9 C3' G B 472 -41.424 -88.151 35.259 1.00 0.01 C
ATOM 10 O3' G B 472 -40.254 -88.514 34.570 1.00 0.01 O
ATOM 11 C2' G B 472 -41.552 -88.812 36.614 1.00 0.01 C
ATOM 12 O2' G B 472 -40.339 -88.707 37.325 1.00 0.01 O
ATOM 13 C1' G B 472 -42.566 -87.909 37.278 1.00 0.01 C
ATOM 14 N9 G B 472 -43.948 -88.347 37.027 1.00 0.01 N
ATOM 15 C8 G B 472 -44.815 -87.803 36.133 1.00 0.01 C
ATOM 16 N7 G B 472 -45.987 -88.366 36.149 1.00 0.01 N
ATOM 17 C5 G B 472 -45.902 -89.347 37.102 1.00 0.01 C
ATOM 18 C6 G B 472 -46.849 -90.280 37.552 1.00 0.01 C
ATOM 19 O6 G B 472 -47.994 -90.495 37.244 1.00 0.01 O
ATOM 20 N1 G B 472 -46.354 -91.064 38.509 1.00 0.01 N
ATOM 21 C2 G B 472 -45.092 -90.982 38.970 1.00 0.01 C
ATOM 22 N2 G B 472 -44.788 -91.857 39.927 1.00 0.01 N
ATOM 23 N3 G B 472 -44.181 -90.126 38.577 1.00 0.01 N
ATOM 24 C4 G B 472 -44.656 -89.332 37.641 1.00 0.01 C
ATOM 25 P G B 473 -40.018 -90.026 34.121 1.00 0.01 P
ATOM 26 OP1 G B 473 -38.581 -90.166 33.873 1.00 0.01 O
ATOM 27 OP2 G B 473 -40.966 -90.339 33.020 1.00 0.01 O
ATOM 28 O5' G B 473 -40.415 -90.828 35.400 1.00 0.01 O
TER
ATOM 2 P C A 454 -40.663 -82.548 43.628 1.00 0.13 P
ATOM 3 OP1 C A 454 -39.982 -83.448 44.593 1.00 0.13 O
ATOM 4 OP2 C A 454 -41.253 -81.278 44.121 1.00 0.13 O
ATOM 5 O5' C A 454 -39.708 -82.258 42.403 1.00 0.13 O
ATOM 6 C5' C A 454 -38.973 -83.314 41.824 1.00 0.13 C
ATOM 7 C4' C A 454 -38.216 -82.865 40.615 1.00 0.13 C
ATOM 8 O4' C A 454 -38.965 -83.217 39.422 1.00 0.13 O
ATOM 9 C3' C A 454 -37.950 -81.383 40.523 1.00 0.13 C
ATOM 10 O3' C A 454 -36.682 -81.203 39.929 1.00 0.13 O
ATOM 11 C2' C A 454 -39.034 -80.890 39.563 1.00 0.13 C
ATOM 12 O2' C A 454 -38.706 -79.707 38.853 1.00 0.13 O
ATOM 13 C1' C A 454 -39.172 -82.077 38.627 1.00 0.13 C
ATOM 14 N1 C A 454 -40.485 -82.205 38.012 1.00 0.01 N
ATOM 15 C2 C A 454 -40.530 -82.893 36.840 1.00 0.01 C
ATOM 16 O2 C A 454 -39.486 -83.337 36.407 1.00 0.01 O
ATOM 17 N3 C A 454 -41.670 -83.070 36.182 1.00 0.01 N
ATOM 18 C4 C A 454 -42.763 -82.571 36.683 1.00 0.01 C
ATOM 19 N4 C A 454 -43.850 -82.794 35.983 1.00 0.01 N
ATOM 20 C5 C A 454 -42.776 -81.857 37.904 1.00 0.01 C
ATOM 21 C6 C A 454 -41.613 -81.698 38.535 1.00 0.01 C
ATOM 22 P C A 455 -35.458 -80.688 40.816 1.00 2.73 P
ATOM 23 OP1 C A 455 -34.208 -81.295 40.235 1.00 2.73 O
ATOM 24 OP2 C A 455 -35.814 -80.950 42.241 1.00 2.73 O
ATOM 25 O5' C A 455 -35.477 -79.128 40.543 1.00 2.73 O
TER
ATOM 1 O3' A B 471 -43.179 -84.713 31.843 1.00 0.01 O
ATOM 2 P G B 472 -43.933 -85.731 32.841 1.00 0.01 P
ATOM 3 OP1 G B 472 -44.656 -86.688 32.015 1.00 0.01 O
ATOM 4 OP2 G B 472 -44.686 -84.937 33.799 1.00 0.01 O
ATOM 5 O5' G B 472 -42.735 -86.450 33.583 1.00 0.01 O
ATOM 6 C5' G B 472 -41.939 -85.759 34.524 1.00 0.01 C
ATOM 7 C4' G B 472 -41.473 -86.676 35.613 1.00 0.01 C
ATOM 8 O4' G B 472 -42.402 -86.624 36.720 1.00 0.01 O
ATOM 9 C3' G B 472 -41.424 -88.151 35.259 1.00 0.01 C
ATOM 10 O3' G B 472 -40.254 -88.514 34.570 1.00 0.01 O
ATOM 11 C2' G B 472 -41.552 -88.812 36.614 1.00 0.01 C
ATOM 12 O2' G B 472 -40.339 -88.707 37.325 1.00 0.01 O
ATOM 13 C1' G B 472 -42.566 -87.909 37.278 1.00 0.01 C
ATOM 14 N9 G B 472 -43.948 -88.347 37.027 1.00 0.01 N
ATOM 15 C8 G B 472 -44.815 -87.803 36.133 1.00 0.01 C
ATOM 16 N7 G B 472 -45.987 -88.366 36.149 1.00 0.01 N
ATOM 17 C5 G B 472 -45.902 -89.347 37.102 1.00 0.01 C
ATOM 18 C6 G B 472 -46.849 -90.280 37.552 1.00 0.01 C
ATOM 19 O6 G B 472 -47.994 -90.495 37.244 1.00 0.01 O
ATOM 20 N1 G B 472 -46.354 -91.064 38.509 1.00 0.01 N
ATOM 21 C2 G B 472 -45.092 -90.982 38.970 1.00 0.01 C
ATOM 22 N2 G B 472 -44.788 -91.857 39.927 1.00 0.01 N
ATOM 23 N3 G B 472 -44.181 -90.126 38.577 1.00 0.01 N
ATOM 24 C4 G B 472 -44.656 -89.332 37.641 1.00 0.01 C
ATOM 25 P G B 473 -40.018 -90.026 34.121 1.00 0.01 P
ATOM 26 OP1 G B 473 -38.581 -90.166 33.873 1.00 0.01 O
ATOM 27 OP2 G B 473 -40.966 -90.339 33.020 1.00 0.01 O
ATOM 28 O5' G B 473 -40.415 -90.828 35.400 1.00 0.01 O
TER
Atoms:
C2: (-40.530,-82.893,36.840)
OP1: (-39.982,-83.448,44.593)
OP2: (-41.253,-81.278,44.121)
C4: (-42.763,-82.571,36.683)
O5': (-39.708,-82.258,42.403)
C3': (-37.950,-81.383,40.523)
C1': (-39.172,-82.077,38.627)
O4': (-38.965,-83.217,39.422)
C5': (-38.973,-83.314,41.824)
P: (-40.663,-82.548,43.628)
O2: (-39.486,-83.337,36.407)
C4': (-38.216,-82.865,40.615)
C2': (-39.034,-80.890,39.563)
O2': (-38.706,-79.707,38.853)
N1: (-40.485,-82.205,38.012)
N3: (-41.670,-83.070,36.182)
N4: (-43.850,-82.794,35.983)
C6: (-41.613,-81.698,38.535)
C5: (-42.776,-81.857,37.904)
O3': (-36.682,-81.203,39.929)
OP1: (-39.982,-83.448,44.593)
OP2: (-41.253,-81.278,44.121)
C4: (-42.763,-82.571,36.683)
O5': (-39.708,-82.258,42.403)
C3': (-37.950,-81.383,40.523)
C1': (-39.172,-82.077,38.627)
O4': (-38.965,-83.217,39.422)
C5': (-38.973,-83.314,41.824)
P: (-40.663,-82.548,43.628)
O2: (-39.486,-83.337,36.407)
C4': (-38.216,-82.865,40.615)
C2': (-39.034,-80.890,39.563)
O2': (-38.706,-79.707,38.853)
N1: (-40.485,-82.205,38.012)
N3: (-41.670,-83.070,36.182)
N4: (-43.850,-82.794,35.983)
C6: (-41.613,-81.698,38.535)
C5: (-42.776,-81.857,37.904)
O3': (-36.682,-81.203,39.929)
OP1: (-44.656,-86.688,32.015)
OP2: (-44.686,-84.937,33.799)
C3': (-41.424,-88.151,35.259)
C1': (-42.566,-87.909,37.278)
C5': (-41.939,-85.759,34.524)
O6: (-47.994,-90.495,37.244)
O4': (-42.402,-86.624,36.720)
C8: (-44.815,-87.803,36.133)
C2: (-45.092,-90.982,38.970)
C6: (-46.849,-90.280,37.552)
C5: (-45.902,-89.347,37.102)
C4: (-44.656,-89.332,37.641)
P: (-43.933,-85.731,32.841)
C4': (-41.473,-86.676,35.613)
C2': (-41.552,-88.812,36.614)
O2': (-40.339,-88.707,37.325)
N1: (-46.354,-91.064,38.509)
N2: (-44.788,-91.857,39.927)
N3: (-44.181,-90.126,38.577)
N7: (-45.987,-88.366,36.149)
N9: (-43.948,-88.347,37.027)
O5': (-42.735,-86.450,33.583)
O3': (-40.254,-88.514,34.570)
OP2: (-44.686,-84.937,33.799)
C3': (-41.424,-88.151,35.259)
C1': (-42.566,-87.909,37.278)
C5': (-41.939,-85.759,34.524)
O6: (-47.994,-90.495,37.244)
O4': (-42.402,-86.624,36.720)
C8: (-44.815,-87.803,36.133)
C2: (-45.092,-90.982,38.970)
C6: (-46.849,-90.280,37.552)
C5: (-45.902,-89.347,37.102)
C4: (-44.656,-89.332,37.641)
P: (-43.933,-85.731,32.841)
C4': (-41.473,-86.676,35.613)
C2': (-41.552,-88.812,36.614)
O2': (-40.339,-88.707,37.325)
N1: (-46.354,-91.064,38.509)
N2: (-44.788,-91.857,39.927)
N3: (-44.181,-90.126,38.577)
N7: (-45.987,-88.366,36.149)
N9: (-43.948,-88.347,37.027)
O5': (-42.735,-86.450,33.583)
O3': (-40.254,-88.514,34.570)
Image (generated by PyMOL):