Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11925:11923
Extra
PDB:
ATOM 1 O3' A A1924 11.812 52.148 86.461 1.00 52.57 O
ATOM 2 P C A1925 11.239 50.645 86.460 1.00 58.45 P
ATOM 3 OP1 C A1925 12.045 49.865 85.511 1.00 57.91 O
ATOM 4 OP2 C A1925 9.792 50.747 86.226 1.00 58.68 O
ATOM 5 O5' C A1925 11.499 50.141 87.947 1.00 58.42 O
ATOM 6 C5' C A1925 12.789 50.203 88.552 1.00 58.34 C
ATOM 7 C4' C A1925 12.694 50.034 90.054 1.00 58.51 C
ATOM 8 O4' C A1925 12.086 51.216 90.628 1.00 59.15 O
ATOM 9 C3' C A1925 11.818 48.879 90.518 1.00 58.27 C
ATOM 10 O3' C A1925 12.540 47.669 90.633 1.00 57.73 O
ATOM 11 C2' C A1925 11.215 49.359 91.839 1.00 58.75 C
ATOM 12 O2' C A1925 12.097 49.081 92.917 1.00 58.70 O
ATOM 13 C1' C A1925 11.172 50.869 91.645 1.00 59.31 C
ATOM 14 N1 C A1925 9.840 51.387 91.270 1.00 59.65 N
ATOM 15 C2 C A1925 8.954 51.762 92.275 1.00 60.10 C
ATOM 16 O2 C A1925 9.304 51.553 93.433 1.00 60.16 O
ATOM 17 N3 C A1925 7.758 52.310 91.956 1.00 60.46 N
ATOM 18 C4 C A1925 7.450 52.510 90.679 1.00 60.39 C
ATOM 19 N4 C A1925 6.288 53.083 90.407 1.00 60.77 N
ATOM 20 C5 C A1925 8.331 52.177 89.611 1.00 59.95 C
ATOM 21 C6 C A1925 9.519 51.643 89.949 1.00 59.60 C
ATOM 22 P A A1926 11.913 46.307 90.061 1.00 53.69 P
ATOM 23 OP1 A A1926 12.884 45.216 90.335 1.00 53.21 O
ATOM 24 OP2 A A1926 11.514 46.578 88.633 1.00 53.64 O
ATOM 25 O5' A A1926 10.612 46.118 90.960 1.00 53.95 O
TER
ATOM 1 O3' G B1922 2.285 55.345 91.720 1.00 54.92 O
ATOM 2 P G B1923 3.732 55.911 91.355 1.00 53.07 P
ATOM 3 OP1 G B1923 4.719 55.063 92.087 1.00 52.65 O
ATOM 4 OP2 G B1923 3.705 57.381 91.615 1.00 53.75 O
ATOM 5 O5' G B1923 3.851 55.638 89.808 1.00 52.69 O
ATOM 6 C5' G B1923 3.715 56.690 88.886 1.00 53.04 C
ATOM 7 C4' G B1923 4.373 56.366 87.577 1.00 52.60 C
ATOM 8 O4' G B1923 3.893 57.307 86.589 1.00 52.96 O
ATOM 9 C3' G B1923 5.882 56.529 87.571 1.00 52.40 C
ATOM 10 O3' G B1923 6.411 55.863 86.423 1.00 51.87 O
ATOM 11 C2' G B1923 5.995 58.027 87.368 1.00 53.00 C
ATOM 12 O2' G B1923 7.259 58.484 86.940 1.00 52.93 O
ATOM 13 C1' G B1923 4.912 58.253 86.308 1.00 53.16 C
ATOM 14 N9 G B1923 4.332 59.597 86.353 1.00 53.87 N
ATOM 15 C8 G B1923 4.202 60.424 85.287 1.00 54.13 C
ATOM 16 N7 G B1923 3.697 61.562 85.617 1.00 54.79 N
ATOM 17 C5 G B1923 3.525 61.490 86.970 1.00 54.96 C
ATOM 18 C6 G B1923 3.041 62.462 87.833 1.00 55.62 C
ATOM 19 O6 G B1923 2.663 63.588 87.561 1.00 56.18 O
ATOM 20 N1 G B1923 2.986 62.031 89.129 1.00 55.61 N
ATOM 21 C2 G B1923 3.360 60.792 89.558 1.00 55.03 C
ATOM 22 N2 G B1923 3.196 60.582 90.887 1.00 55.16 N
ATOM 23 N3 G B1923 3.850 59.866 88.744 1.00 54.40 N
ATOM 24 C4 G B1923 3.895 60.284 87.461 1.00 54.40 C
ATOM 25 P A B1924 6.913 54.342 86.497 1.00 54.25 P
ATOM 26 OP1 A B1924 6.759 53.785 85.130 1.00 53.87 O
ATOM 27 OP2 A B1924 6.197 53.700 87.625 1.00 54.25 O
ATOM 28 O5' A B1924 8.470 54.498 86.862 1.00 54.10 O
TER
ATOM 2 P C A1925 11.239 50.645 86.460 1.00 58.45 P
ATOM 3 OP1 C A1925 12.045 49.865 85.511 1.00 57.91 O
ATOM 4 OP2 C A1925 9.792 50.747 86.226 1.00 58.68 O
ATOM 5 O5' C A1925 11.499 50.141 87.947 1.00 58.42 O
ATOM 6 C5' C A1925 12.789 50.203 88.552 1.00 58.34 C
ATOM 7 C4' C A1925 12.694 50.034 90.054 1.00 58.51 C
ATOM 8 O4' C A1925 12.086 51.216 90.628 1.00 59.15 O
ATOM 9 C3' C A1925 11.818 48.879 90.518 1.00 58.27 C
ATOM 10 O3' C A1925 12.540 47.669 90.633 1.00 57.73 O
ATOM 11 C2' C A1925 11.215 49.359 91.839 1.00 58.75 C
ATOM 12 O2' C A1925 12.097 49.081 92.917 1.00 58.70 O
ATOM 13 C1' C A1925 11.172 50.869 91.645 1.00 59.31 C
ATOM 14 N1 C A1925 9.840 51.387 91.270 1.00 59.65 N
ATOM 15 C2 C A1925 8.954 51.762 92.275 1.00 60.10 C
ATOM 16 O2 C A1925 9.304 51.553 93.433 1.00 60.16 O
ATOM 17 N3 C A1925 7.758 52.310 91.956 1.00 60.46 N
ATOM 18 C4 C A1925 7.450 52.510 90.679 1.00 60.39 C
ATOM 19 N4 C A1925 6.288 53.083 90.407 1.00 60.77 N
ATOM 20 C5 C A1925 8.331 52.177 89.611 1.00 59.95 C
ATOM 21 C6 C A1925 9.519 51.643 89.949 1.00 59.60 C
ATOM 22 P A A1926 11.913 46.307 90.061 1.00 53.69 P
ATOM 23 OP1 A A1926 12.884 45.216 90.335 1.00 53.21 O
ATOM 24 OP2 A A1926 11.514 46.578 88.633 1.00 53.64 O
ATOM 25 O5' A A1926 10.612 46.118 90.960 1.00 53.95 O
TER
ATOM 1 O3' G B1922 2.285 55.345 91.720 1.00 54.92 O
ATOM 2 P G B1923 3.732 55.911 91.355 1.00 53.07 P
ATOM 3 OP1 G B1923 4.719 55.063 92.087 1.00 52.65 O
ATOM 4 OP2 G B1923 3.705 57.381 91.615 1.00 53.75 O
ATOM 5 O5' G B1923 3.851 55.638 89.808 1.00 52.69 O
ATOM 6 C5' G B1923 3.715 56.690 88.886 1.00 53.04 C
ATOM 7 C4' G B1923 4.373 56.366 87.577 1.00 52.60 C
ATOM 8 O4' G B1923 3.893 57.307 86.589 1.00 52.96 O
ATOM 9 C3' G B1923 5.882 56.529 87.571 1.00 52.40 C
ATOM 10 O3' G B1923 6.411 55.863 86.423 1.00 51.87 O
ATOM 11 C2' G B1923 5.995 58.027 87.368 1.00 53.00 C
ATOM 12 O2' G B1923 7.259 58.484 86.940 1.00 52.93 O
ATOM 13 C1' G B1923 4.912 58.253 86.308 1.00 53.16 C
ATOM 14 N9 G B1923 4.332 59.597 86.353 1.00 53.87 N
ATOM 15 C8 G B1923 4.202 60.424 85.287 1.00 54.13 C
ATOM 16 N7 G B1923 3.697 61.562 85.617 1.00 54.79 N
ATOM 17 C5 G B1923 3.525 61.490 86.970 1.00 54.96 C
ATOM 18 C6 G B1923 3.041 62.462 87.833 1.00 55.62 C
ATOM 19 O6 G B1923 2.663 63.588 87.561 1.00 56.18 O
ATOM 20 N1 G B1923 2.986 62.031 89.129 1.00 55.61 N
ATOM 21 C2 G B1923 3.360 60.792 89.558 1.00 55.03 C
ATOM 22 N2 G B1923 3.196 60.582 90.887 1.00 55.16 N
ATOM 23 N3 G B1923 3.850 59.866 88.744 1.00 54.40 N
ATOM 24 C4 G B1923 3.895 60.284 87.461 1.00 54.40 C
ATOM 25 P A B1924 6.913 54.342 86.497 1.00 54.25 P
ATOM 26 OP1 A B1924 6.759 53.785 85.130 1.00 53.87 O
ATOM 27 OP2 A B1924 6.197 53.700 87.625 1.00 54.25 O
ATOM 28 O5' A B1924 8.470 54.498 86.862 1.00 54.10 O
TER
Atoms:
C2: (8.954,51.762,92.275)
OP1: (12.045,49.865,85.511)
OP2: (9.792,50.747,86.226)
C4: (7.450,52.510,90.679)
O5': (11.499,50.141,87.947)
C3': (11.818,48.879,90.518)
C1': (11.172,50.869,91.645)
O4': (12.086,51.216,90.628)
C5': (12.789,50.203,88.552)
P: (11.239,50.645,86.460)
O2: (9.304,51.553,93.433)
C4': (12.694,50.034,90.054)
C2': (11.215,49.359,91.839)
O2': (12.097,49.081,92.917)
N1: (9.840,51.387,91.270)
N3: (7.758,52.310,91.956)
N4: (6.288,53.083,90.407)
C6: (9.519,51.643,89.949)
C5: (8.331,52.177,89.611)
O3': (12.540,47.669,90.633)
OP1: (12.045,49.865,85.511)
OP2: (9.792,50.747,86.226)
C4: (7.450,52.510,90.679)
O5': (11.499,50.141,87.947)
C3': (11.818,48.879,90.518)
C1': (11.172,50.869,91.645)
O4': (12.086,51.216,90.628)
C5': (12.789,50.203,88.552)
P: (11.239,50.645,86.460)
O2: (9.304,51.553,93.433)
C4': (12.694,50.034,90.054)
C2': (11.215,49.359,91.839)
O2': (12.097,49.081,92.917)
N1: (9.840,51.387,91.270)
N3: (7.758,52.310,91.956)
N4: (6.288,53.083,90.407)
C6: (9.519,51.643,89.949)
C5: (8.331,52.177,89.611)
O3': (12.540,47.669,90.633)
OP1: (4.719,55.063,92.087)
OP2: (3.705,57.381,91.615)
C3': (5.882,56.529,87.571)
C1': (4.912,58.253,86.308)
C5': (3.715,56.690,88.886)
O6: (2.663,63.588,87.561)
O4': (3.893,57.307,86.589)
C8: (4.202,60.424,85.287)
C2: (3.360,60.792,89.558)
C6: (3.041,62.462,87.833)
C5: (3.525,61.490,86.970)
C4: (3.895,60.284,87.461)
P: (3.732,55.911,91.355)
C4': (4.373,56.366,87.577)
C2': (5.995,58.027,87.368)
O2': (7.259,58.484,86.940)
N1: (2.986,62.031,89.129)
N2: (3.196,60.582,90.887)
N3: (3.850,59.866,88.744)
N7: (3.697,61.562,85.617)
N9: (4.332,59.597,86.353)
O5': (3.851,55.638,89.808)
O3': (6.411,55.863,86.423)
OP2: (3.705,57.381,91.615)
C3': (5.882,56.529,87.571)
C1': (4.912,58.253,86.308)
C5': (3.715,56.690,88.886)
O6: (2.663,63.588,87.561)
O4': (3.893,57.307,86.589)
C8: (4.202,60.424,85.287)
C2: (3.360,60.792,89.558)
C6: (3.041,62.462,87.833)
C5: (3.525,61.490,86.970)
C4: (3.895,60.284,87.461)
P: (3.732,55.911,91.355)
C4': (4.373,56.366,87.577)
C2': (5.995,58.027,87.368)
O2': (7.259,58.484,86.940)
N1: (2.986,62.031,89.129)
N2: (3.196,60.582,90.887)
N3: (3.850,59.866,88.744)
N7: (3.697,61.562,85.617)
N9: (4.332,59.597,86.353)
O5': (3.851,55.638,89.808)
O3': (6.411,55.863,86.423)
Image (generated by PyMOL):