Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1486:A1487
Extra
PDB:
ATOM 1 O3' G A1485 -23.379 -4.861 48.704 1.00 17.51 O
ATOM 2 P C A1486 -22.634 -5.685 49.851 1.00 39.59 P
ATOM 3 OP1 C A1486 -21.259 -5.170 49.929 1.00 39.59 O
ATOM 4 OP2 C A1486 -22.854 -7.125 49.564 1.00 39.59 O
ATOM 5 O5' C A1486 -23.436 -5.262 51.143 1.00 39.59 O
ATOM 6 C5' C A1486 -24.086 -4.003 51.197 1.00 39.59 C
ATOM 7 C4' C A1486 -24.936 -3.871 52.427 1.00 39.59 C
ATOM 8 O4' C A1486 -26.038 -4.798 52.342 1.00 39.59 O
ATOM 9 C3' C A1486 -24.229 -4.165 53.736 1.00 39.59 C
ATOM 10 O3' C A1486 -24.722 -3.295 54.727 1.00 39.59 O
ATOM 11 C2' C A1486 -24.632 -5.591 54.067 1.00 39.59 C
ATOM 12 O2' C A1486 -24.682 -5.872 55.449 1.00 39.59 O
ATOM 13 C1' C A1486 -26.011 -5.697 53.435 1.00 39.59 C
ATOM 14 N1 C A1486 -26.308 -7.029 52.909 1.00 40.29 N
ATOM 15 C2 C A1486 -27.304 -7.760 53.526 1.00 40.29 C
ATOM 16 O2 C A1486 -27.858 -7.235 54.499 1.00 40.29 O
ATOM 17 N3 C A1486 -27.614 -8.992 53.049 1.00 40.29 N
ATOM 18 C4 C A1486 -26.945 -9.467 51.988 1.00 40.29 C
ATOM 19 N4 C A1486 -27.269 -10.681 51.531 1.00 40.29 N
ATOM 20 C5 C A1486 -25.910 -8.720 51.337 1.00 40.29 C
ATOM 21 C6 C A1486 -25.627 -7.511 51.828 1.00 40.29 C
ATOM 22 P A A1487 -23.773 -2.143 55.291 1.00 46.01 P
ATOM 23 OP1 A A1487 -24.410 -1.631 56.531 1.00 46.01 O
ATOM 24 OP2 A A1487 -23.496 -1.187 54.162 1.00 46.01 O
ATOM 25 O5' A A1487 -22.459 -2.953 55.650 1.00 46.01 O
TER
ATOM 1 O3' C B1486 -24.722 -3.295 54.727 1.00 39.59 O
ATOM 2 P A B1487 -23.773 -2.143 55.291 1.00 46.01 P
ATOM 3 OP1 A B1487 -24.410 -1.631 56.531 1.00 46.01 O
ATOM 4 OP2 A B1487 -23.496 -1.187 54.162 1.00 46.01 O
ATOM 5 O5' A B1487 -22.459 -2.953 55.650 1.00 46.01 O
ATOM 6 C5' A B1487 -22.487 -3.986 56.615 1.00 46.01 C
ATOM 7 C4' A B1487 -21.173 -4.071 57.316 1.00 46.01 C
ATOM 8 O4' A B1487 -20.865 -5.456 57.617 1.00 46.01 O
ATOM 9 C3' A B1487 -19.984 -3.587 56.507 1.00 46.01 C
ATOM 10 O3' A B1487 -19.861 -2.164 56.518 1.00 46.01 O
ATOM 11 C2' A B1487 -18.840 -4.362 57.135 1.00 46.01 C
ATOM 12 O2' A B1487 -18.511 -3.844 58.412 1.00 46.01 O
ATOM 13 C1' A B1487 -19.516 -5.714 57.340 1.00 46.01 C
ATOM 14 N9 A B1487 -19.472 -6.539 56.127 1.00 45.48 N
ATOM 15 C8 A B1487 -20.555 -6.984 55.411 1.00 45.48 C
ATOM 16 N7 A B1487 -20.219 -7.703 54.373 1.00 45.48 N
ATOM 17 C5 A B1487 -18.832 -7.726 54.419 1.00 45.48 C
ATOM 18 C6 A B1487 -17.864 -8.312 53.602 1.00 45.48 C
ATOM 19 N6 A B1487 -18.122 -9.034 52.514 1.00 45.48 N
ATOM 20 N1 A B1487 -16.581 -8.129 53.949 1.00 45.48 N
ATOM 21 C2 A B1487 -16.279 -7.409 55.028 1.00 45.48 C
ATOM 22 N3 A B1487 -17.091 -6.802 55.869 1.00 45.48 N
ATOM 23 C4 A B1487 -18.360 -7.010 55.498 1.00 45.48 C
ATOM 24 P A B1488 -18.432 -1.414 56.574 1.00 29.25 P
ATOM 25 OP1 A B1488 -18.392 -0.671 57.861 1.00 29.25 O
ATOM 26 OP2 A B1488 -18.271 -0.645 55.294 1.00 29.25 O
ATOM 27 O5' A B1488 -17.388 -2.604 56.612 1.00 29.25 O
TER
ATOM 2 P C A1486 -22.634 -5.685 49.851 1.00 39.59 P
ATOM 3 OP1 C A1486 -21.259 -5.170 49.929 1.00 39.59 O
ATOM 4 OP2 C A1486 -22.854 -7.125 49.564 1.00 39.59 O
ATOM 5 O5' C A1486 -23.436 -5.262 51.143 1.00 39.59 O
ATOM 6 C5' C A1486 -24.086 -4.003 51.197 1.00 39.59 C
ATOM 7 C4' C A1486 -24.936 -3.871 52.427 1.00 39.59 C
ATOM 8 O4' C A1486 -26.038 -4.798 52.342 1.00 39.59 O
ATOM 9 C3' C A1486 -24.229 -4.165 53.736 1.00 39.59 C
ATOM 10 O3' C A1486 -24.722 -3.295 54.727 1.00 39.59 O
ATOM 11 C2' C A1486 -24.632 -5.591 54.067 1.00 39.59 C
ATOM 12 O2' C A1486 -24.682 -5.872 55.449 1.00 39.59 O
ATOM 13 C1' C A1486 -26.011 -5.697 53.435 1.00 39.59 C
ATOM 14 N1 C A1486 -26.308 -7.029 52.909 1.00 40.29 N
ATOM 15 C2 C A1486 -27.304 -7.760 53.526 1.00 40.29 C
ATOM 16 O2 C A1486 -27.858 -7.235 54.499 1.00 40.29 O
ATOM 17 N3 C A1486 -27.614 -8.992 53.049 1.00 40.29 N
ATOM 18 C4 C A1486 -26.945 -9.467 51.988 1.00 40.29 C
ATOM 19 N4 C A1486 -27.269 -10.681 51.531 1.00 40.29 N
ATOM 20 C5 C A1486 -25.910 -8.720 51.337 1.00 40.29 C
ATOM 21 C6 C A1486 -25.627 -7.511 51.828 1.00 40.29 C
ATOM 22 P A A1487 -23.773 -2.143 55.291 1.00 46.01 P
ATOM 23 OP1 A A1487 -24.410 -1.631 56.531 1.00 46.01 O
ATOM 24 OP2 A A1487 -23.496 -1.187 54.162 1.00 46.01 O
ATOM 25 O5' A A1487 -22.459 -2.953 55.650 1.00 46.01 O
TER
ATOM 1 O3' C B1486 -24.722 -3.295 54.727 1.00 39.59 O
ATOM 2 P A B1487 -23.773 -2.143 55.291 1.00 46.01 P
ATOM 3 OP1 A B1487 -24.410 -1.631 56.531 1.00 46.01 O
ATOM 4 OP2 A B1487 -23.496 -1.187 54.162 1.00 46.01 O
ATOM 5 O5' A B1487 -22.459 -2.953 55.650 1.00 46.01 O
ATOM 6 C5' A B1487 -22.487 -3.986 56.615 1.00 46.01 C
ATOM 7 C4' A B1487 -21.173 -4.071 57.316 1.00 46.01 C
ATOM 8 O4' A B1487 -20.865 -5.456 57.617 1.00 46.01 O
ATOM 9 C3' A B1487 -19.984 -3.587 56.507 1.00 46.01 C
ATOM 10 O3' A B1487 -19.861 -2.164 56.518 1.00 46.01 O
ATOM 11 C2' A B1487 -18.840 -4.362 57.135 1.00 46.01 C
ATOM 12 O2' A B1487 -18.511 -3.844 58.412 1.00 46.01 O
ATOM 13 C1' A B1487 -19.516 -5.714 57.340 1.00 46.01 C
ATOM 14 N9 A B1487 -19.472 -6.539 56.127 1.00 45.48 N
ATOM 15 C8 A B1487 -20.555 -6.984 55.411 1.00 45.48 C
ATOM 16 N7 A B1487 -20.219 -7.703 54.373 1.00 45.48 N
ATOM 17 C5 A B1487 -18.832 -7.726 54.419 1.00 45.48 C
ATOM 18 C6 A B1487 -17.864 -8.312 53.602 1.00 45.48 C
ATOM 19 N6 A B1487 -18.122 -9.034 52.514 1.00 45.48 N
ATOM 20 N1 A B1487 -16.581 -8.129 53.949 1.00 45.48 N
ATOM 21 C2 A B1487 -16.279 -7.409 55.028 1.00 45.48 C
ATOM 22 N3 A B1487 -17.091 -6.802 55.869 1.00 45.48 N
ATOM 23 C4 A B1487 -18.360 -7.010 55.498 1.00 45.48 C
ATOM 24 P A B1488 -18.432 -1.414 56.574 1.00 29.25 P
ATOM 25 OP1 A B1488 -18.392 -0.671 57.861 1.00 29.25 O
ATOM 26 OP2 A B1488 -18.271 -0.645 55.294 1.00 29.25 O
ATOM 27 O5' A B1488 -17.388 -2.604 56.612 1.00 29.25 O
TER
Atoms:
C2: (-27.304,-7.760,53.526)
OP1: (-21.259,-5.170,49.929)
OP2: (-22.854,-7.125,49.564)
C4: (-26.945,-9.467,51.988)
O5': (-23.436,-5.262,51.143)
C3': (-24.229,-4.165,53.736)
C1': (-26.011,-5.697,53.435)
O4': (-26.038,-4.798,52.342)
C5': (-24.086,-4.003,51.197)
P: (-22.634,-5.685,49.851)
O2: (-27.858,-7.235,54.499)
C4': (-24.936,-3.871,52.427)
C2': (-24.632,-5.591,54.067)
O2': (-24.682,-5.872,55.449)
N1: (-26.308,-7.029,52.909)
N3: (-27.614,-8.992,53.049)
N4: (-27.269,-10.681,51.531)
C6: (-25.627,-7.511,51.828)
C5: (-25.910,-8.720,51.337)
O3': (-24.722,-3.295,54.727)
OP1: (-21.259,-5.170,49.929)
OP2: (-22.854,-7.125,49.564)
C4: (-26.945,-9.467,51.988)
O5': (-23.436,-5.262,51.143)
C3': (-24.229,-4.165,53.736)
C1': (-26.011,-5.697,53.435)
O4': (-26.038,-4.798,52.342)
C5': (-24.086,-4.003,51.197)
P: (-22.634,-5.685,49.851)
O2: (-27.858,-7.235,54.499)
C4': (-24.936,-3.871,52.427)
C2': (-24.632,-5.591,54.067)
O2': (-24.682,-5.872,55.449)
N1: (-26.308,-7.029,52.909)
N3: (-27.614,-8.992,53.049)
N4: (-27.269,-10.681,51.531)
C6: (-25.627,-7.511,51.828)
C5: (-25.910,-8.720,51.337)
O3': (-24.722,-3.295,54.727)
OP1: (-24.410,-1.631,56.531)
OP2: (-23.496,-1.187,54.162)
C3': (-19.984,-3.587,56.507)
C1': (-19.516,-5.714,57.340)
C5': (-22.487,-3.986,56.615)
O4': (-20.865,-5.456,57.617)
C8: (-20.555,-6.984,55.411)
O2': (-18.511,-3.844,58.412)
C6: (-17.864,-8.312,53.602)
C5: (-18.832,-7.726,54.419)
C4: (-18.360,-7.010,55.498)
P: (-23.773,-2.143,55.291)
C4': (-21.173,-4.071,57.316)
C2': (-18.840,-4.362,57.135)
C2: (-16.279,-7.409,55.028)
N1: (-16.581,-8.129,53.949)
N3: (-17.091,-6.802,55.869)
N6: (-18.122,-9.034,52.514)
N7: (-20.219,-7.703,54.373)
N9: (-19.472,-6.539,56.127)
O5': (-22.459,-2.953,55.650)
O3': (-19.861,-2.164,56.518)
OP2: (-23.496,-1.187,54.162)
C3': (-19.984,-3.587,56.507)
C1': (-19.516,-5.714,57.340)
C5': (-22.487,-3.986,56.615)
O4': (-20.865,-5.456,57.617)
C8: (-20.555,-6.984,55.411)
O2': (-18.511,-3.844,58.412)
C6: (-17.864,-8.312,53.602)
C5: (-18.832,-7.726,54.419)
C4: (-18.360,-7.010,55.498)
P: (-23.773,-2.143,55.291)
C4': (-21.173,-4.071,57.316)
C2': (-18.840,-4.362,57.135)
C2: (-16.279,-7.409,55.028)
N1: (-16.581,-8.129,53.949)
N3: (-17.091,-6.802,55.869)
N6: (-18.122,-9.034,52.514)
N7: (-20.219,-7.703,54.373)
N9: (-19.472,-6.539,56.127)
O5': (-22.459,-2.953,55.650)
O3': (-19.861,-2.164,56.518)
Image (generated by PyMOL):