Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3P59:C10:C11
Extra
PDB:
ATOM 1 O3' C A 9 11.624 1.561 9.334 1.00115.44 O
ATOM 2 P U A 10 10.136 1.791 8.768 1.00273.78 P
ATOM 3 OP1 U A 10 10.166 3.044 7.977 1.00272.99 O
ATOM 4 OP2 U A 10 9.211 1.704 9.921 1.00274.75 O
ATOM 5 O5' U A 10 9.916 0.540 7.803 1.00 94.34 O
ATOM 6 C5' U A 10 8.609 0.057 7.514 1.00 91.85 C
ATOM 7 C4' U A 10 7.765 1.129 6.886 1.00 93.43 C
ATOM 8 O4' U A 10 8.575 2.303 6.653 1.00 95.30 O
ATOM 9 C3' U A 10 7.164 0.799 5.527 1.00 97.23 C
ATOM 10 O3' U A 10 5.947 0.081 5.641 1.00 98.55 O
ATOM 11 C2' U A 10 6.996 2.172 4.876 1.00101.57 C
ATOM 12 O2' U A 10 5.769 2.775 5.269 1.00102.90 O
ATOM 13 C1' U A 10 8.147 2.970 5.493 1.00101.15 C
ATOM 14 N1 U A 10 9.295 3.105 4.578 1.00104.49 N
ATOM 15 C2 U A 10 9.315 4.229 3.771 1.00105.25 C
ATOM 16 O2 U A 10 8.436 5.076 3.778 1.00107.54 O
ATOM 17 N3 U A 10 10.400 4.329 2.940 1.00103.41 N
ATOM 18 C4 U A 10 11.448 3.443 2.842 1.00102.44 C
ATOM 19 O4 U A 10 12.347 3.692 2.042 1.00100.49 O
ATOM 20 C5 U A 10 11.361 2.305 3.713 1.00105.34 C
ATOM 21 C6 U A 10 10.311 2.177 4.538 1.00106.40 C
ATOM 22 P A A 11 5.362 -0.755 4.400 1.00 79.90 P
ATOM 23 OP1 A A 11 3.919 -0.997 4.682 1.00 76.83 O
ATOM 24 OP2 A A 11 6.263 -1.919 4.206 1.00 77.18 O
ATOM 25 O5' A A 11 5.509 0.252 3.170 1.00140.75 O
TER
ATOM 1 O3' U B 10 5.947 0.081 5.641 1.00 98.55 O
ATOM 2 P A B 11 5.362 -0.755 4.400 1.00 79.90 P
ATOM 3 OP1 A B 11 3.919 -0.997 4.682 1.00 76.83 O
ATOM 4 OP2 A B 11 6.263 -1.919 4.206 1.00 77.18 O
ATOM 5 O5' A B 11 5.509 0.252 3.170 1.00140.75 O
ATOM 6 C5' A B 11 4.430 0.465 2.263 1.00138.31 C
ATOM 7 C4' A B 11 4.345 -0.622 1.210 1.00134.69 C
ATOM 8 O4' A B 11 5.415 -0.472 0.228 1.00129.14 O
ATOM 9 C3' A B 11 4.518 -2.053 1.692 1.00135.42 C
ATOM 10 O3' A B 11 3.380 -2.568 2.379 1.00140.21 O
ATOM 11 C2' A B 11 4.851 -2.780 0.391 1.00128.44 C
ATOM 12 O2' A B 11 3.685 -2.931 -0.408 1.00129.20 O
ATOM 13 C1' A B 11 5.765 -1.752 -0.291 1.00120.06 C
ATOM 14 N9 A B 11 7.211 -2.019 -0.030 1.00101.25 N
ATOM 15 C8 A B 11 8.007 -1.453 0.946 1.00 95.48 C
ATOM 16 N7 A B 11 9.251 -1.884 0.952 1.00 90.17 N
ATOM 17 C5 A B 11 9.321 -2.808 -0.093 1.00 80.50 C
ATOM 18 C6 A B 11 10.380 -3.620 -0.599 1.00 63.38 C
ATOM 19 N6 A B 11 11.628 -3.634 -0.109 1.00 59.99 N
ATOM 20 N1 A B 11 10.121 -4.440 -1.644 1.00 55.90 N
ATOM 21 C2 A B 11 8.881 -4.427 -2.137 1.00 63.43 C
ATOM 22 N3 A B 11 7.808 -3.719 -1.750 1.00 74.37 N
ATOM 23 C4 A B 11 8.073 -2.903 -0.706 1.00 85.47 C
ATOM 24 P C B 12 3.519 -3.866 3.340 1.00 74.50 P
ATOM 25 OP1 C B 12 2.299 -3.909 4.195 1.00 67.67 O
ATOM 26 OP2 C B 12 4.847 -3.788 4.001 1.00 71.15 O
ATOM 27 O5' C B 12 3.502 -5.075 2.286 1.00 95.61 O
TER
ATOM 2 P U A 10 10.136 1.791 8.768 1.00273.78 P
ATOM 3 OP1 U A 10 10.166 3.044 7.977 1.00272.99 O
ATOM 4 OP2 U A 10 9.211 1.704 9.921 1.00274.75 O
ATOM 5 O5' U A 10 9.916 0.540 7.803 1.00 94.34 O
ATOM 6 C5' U A 10 8.609 0.057 7.514 1.00 91.85 C
ATOM 7 C4' U A 10 7.765 1.129 6.886 1.00 93.43 C
ATOM 8 O4' U A 10 8.575 2.303 6.653 1.00 95.30 O
ATOM 9 C3' U A 10 7.164 0.799 5.527 1.00 97.23 C
ATOM 10 O3' U A 10 5.947 0.081 5.641 1.00 98.55 O
ATOM 11 C2' U A 10 6.996 2.172 4.876 1.00101.57 C
ATOM 12 O2' U A 10 5.769 2.775 5.269 1.00102.90 O
ATOM 13 C1' U A 10 8.147 2.970 5.493 1.00101.15 C
ATOM 14 N1 U A 10 9.295 3.105 4.578 1.00104.49 N
ATOM 15 C2 U A 10 9.315 4.229 3.771 1.00105.25 C
ATOM 16 O2 U A 10 8.436 5.076 3.778 1.00107.54 O
ATOM 17 N3 U A 10 10.400 4.329 2.940 1.00103.41 N
ATOM 18 C4 U A 10 11.448 3.443 2.842 1.00102.44 C
ATOM 19 O4 U A 10 12.347 3.692 2.042 1.00100.49 O
ATOM 20 C5 U A 10 11.361 2.305 3.713 1.00105.34 C
ATOM 21 C6 U A 10 10.311 2.177 4.538 1.00106.40 C
ATOM 22 P A A 11 5.362 -0.755 4.400 1.00 79.90 P
ATOM 23 OP1 A A 11 3.919 -0.997 4.682 1.00 76.83 O
ATOM 24 OP2 A A 11 6.263 -1.919 4.206 1.00 77.18 O
ATOM 25 O5' A A 11 5.509 0.252 3.170 1.00140.75 O
TER
ATOM 1 O3' U B 10 5.947 0.081 5.641 1.00 98.55 O
ATOM 2 P A B 11 5.362 -0.755 4.400 1.00 79.90 P
ATOM 3 OP1 A B 11 3.919 -0.997 4.682 1.00 76.83 O
ATOM 4 OP2 A B 11 6.263 -1.919 4.206 1.00 77.18 O
ATOM 5 O5' A B 11 5.509 0.252 3.170 1.00140.75 O
ATOM 6 C5' A B 11 4.430 0.465 2.263 1.00138.31 C
ATOM 7 C4' A B 11 4.345 -0.622 1.210 1.00134.69 C
ATOM 8 O4' A B 11 5.415 -0.472 0.228 1.00129.14 O
ATOM 9 C3' A B 11 4.518 -2.053 1.692 1.00135.42 C
ATOM 10 O3' A B 11 3.380 -2.568 2.379 1.00140.21 O
ATOM 11 C2' A B 11 4.851 -2.780 0.391 1.00128.44 C
ATOM 12 O2' A B 11 3.685 -2.931 -0.408 1.00129.20 O
ATOM 13 C1' A B 11 5.765 -1.752 -0.291 1.00120.06 C
ATOM 14 N9 A B 11 7.211 -2.019 -0.030 1.00101.25 N
ATOM 15 C8 A B 11 8.007 -1.453 0.946 1.00 95.48 C
ATOM 16 N7 A B 11 9.251 -1.884 0.952 1.00 90.17 N
ATOM 17 C5 A B 11 9.321 -2.808 -0.093 1.00 80.50 C
ATOM 18 C6 A B 11 10.380 -3.620 -0.599 1.00 63.38 C
ATOM 19 N6 A B 11 11.628 -3.634 -0.109 1.00 59.99 N
ATOM 20 N1 A B 11 10.121 -4.440 -1.644 1.00 55.90 N
ATOM 21 C2 A B 11 8.881 -4.427 -2.137 1.00 63.43 C
ATOM 22 N3 A B 11 7.808 -3.719 -1.750 1.00 74.37 N
ATOM 23 C4 A B 11 8.073 -2.903 -0.706 1.00 85.47 C
ATOM 24 P C B 12 3.519 -3.866 3.340 1.00 74.50 P
ATOM 25 OP1 C B 12 2.299 -3.909 4.195 1.00 67.67 O
ATOM 26 OP2 C B 12 4.847 -3.788 4.001 1.00 71.15 O
ATOM 27 O5' C B 12 3.502 -5.075 2.286 1.00 95.61 O
TER
Atoms:
C4: (11.448,3.443,2.842)
N3: (10.400,4.329,2.940)
OP1: (10.166,3.044,7.977)
OP2: (9.211,1.704,9.921)
C2: (9.315,4.229,3.771)
C1': (8.147,2.970,5.493)
C3': (7.164,0.799,5.527)
O5': (9.916,0.540,7.803)
O4': (8.575,2.303,6.653)
C5': (8.609,0.057,7.514)
P: (10.136,1.791,8.768)
C4': (7.765,1.129,6.886)
C2': (6.996,2.172,4.876)
O2': (5.769,2.775,5.269)
N1: (9.295,3.105,4.578)
O4: (12.347,3.692,2.042)
O2: (8.436,5.076,3.778)
C6: (10.311,2.177,4.538)
C5: (11.361,2.305,3.713)
O3': (5.947,0.081,5.641)
N3: (10.400,4.329,2.940)
OP1: (10.166,3.044,7.977)
OP2: (9.211,1.704,9.921)
C2: (9.315,4.229,3.771)
C1': (8.147,2.970,5.493)
C3': (7.164,0.799,5.527)
O5': (9.916,0.540,7.803)
O4': (8.575,2.303,6.653)
C5': (8.609,0.057,7.514)
P: (10.136,1.791,8.768)
C4': (7.765,1.129,6.886)
C2': (6.996,2.172,4.876)
O2': (5.769,2.775,5.269)
N1: (9.295,3.105,4.578)
O4: (12.347,3.692,2.042)
O2: (8.436,5.076,3.778)
C6: (10.311,2.177,4.538)
C5: (11.361,2.305,3.713)
O3': (5.947,0.081,5.641)
OP1: (3.919,-0.997,4.682)
OP2: (6.263,-1.919,4.206)
C3': (4.518,-2.053,1.692)
C1': (5.765,-1.752,-0.291)
C5': (4.430,0.465,2.263)
O4': (5.415,-0.472,0.228)
C8: (8.007,-1.453,0.946)
O2': (3.685,-2.931,-0.408)
C6: (10.380,-3.620,-0.599)
C5: (9.321,-2.808,-0.093)
C4: (8.073,-2.903,-0.706)
P: (5.362,-0.755,4.400)
C4': (4.345,-0.622,1.210)
C2': (4.851,-2.780,0.391)
C2: (8.881,-4.427,-2.137)
N1: (10.121,-4.440,-1.644)
N3: (7.808,-3.719,-1.750)
N6: (11.628,-3.634,-0.109)
N7: (9.251,-1.884,0.952)
N9: (7.211,-2.019,-0.030)
O5': (5.509,0.252,3.170)
O3': (3.380,-2.568,2.379)
OP2: (6.263,-1.919,4.206)
C3': (4.518,-2.053,1.692)
C1': (5.765,-1.752,-0.291)
C5': (4.430,0.465,2.263)
O4': (5.415,-0.472,0.228)
C8: (8.007,-1.453,0.946)
O2': (3.685,-2.931,-0.408)
C6: (10.380,-3.620,-0.599)
C5: (9.321,-2.808,-0.093)
C4: (8.073,-2.903,-0.706)
P: (5.362,-0.755,4.400)
C4': (4.345,-0.622,1.210)
C2': (4.851,-2.780,0.391)
C2: (8.881,-4.427,-2.137)
N1: (10.121,-4.440,-1.644)
N3: (7.808,-3.719,-1.750)
N6: (11.628,-3.634,-0.109)
N7: (9.251,-1.884,0.952)
N9: (7.211,-2.019,-0.030)
O5': (5.509,0.252,3.170)
O3': (3.380,-2.568,2.379)
Image (generated by PyMOL):