Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01283:0541
Extra
PDB:
ATOM 1 O3' G A1282 10.086 129.858 80.580 1.00 46.11 O
ATOM 2 P G A1283 10.040 128.250 80.671 1.00 46.67 P
ATOM 3 OP1 G A1283 9.474 127.925 81.994 1.00 46.60 O
ATOM 4 OP2 G A1283 11.367 127.720 80.291 1.00 47.16 O
ATOM 5 O5' G A1283 8.985 127.787 79.565 1.00 48.00 O
ATOM 6 C5' G A1283 7.559 127.978 79.771 1.00 48.15 C
ATOM 7 C4' G A1283 6.750 127.274 78.700 1.00 45.23 C
ATOM 8 O4' G A1283 7.120 127.784 77.391 1.00 45.07 O
ATOM 9 C3' G A1283 6.954 125.778 78.549 1.00 44.93 C
ATOM 10 O3' G A1283 6.247 125.016 79.504 1.00 45.34 O
ATOM 11 C2' G A1283 6.415 125.534 77.152 1.00 45.05 C
ATOM 12 O2' G A1283 5.008 125.549 77.108 1.00 47.59 O
ATOM 13 C1' G A1283 6.952 126.759 76.416 1.00 44.75 C
ATOM 14 N9 G A1283 8.244 126.450 75.810 1.00 42.51 N
ATOM 15 C8 G A1283 9.478 126.897 76.203 1.00 41.79 C
ATOM 16 N7 G A1283 10.451 126.398 75.492 1.00 42.53 N
ATOM 17 C5 G A1283 9.819 125.583 74.565 1.00 41.43 C
ATOM 18 C6 G A1283 10.359 124.769 73.530 1.00 42.21 C
ATOM 19 O6 G A1283 11.545 124.592 73.218 1.00 42.68 O
ATOM 20 N1 G A1283 9.360 124.111 72.829 1.00 41.28 N
ATOM 21 C2 G A1283 8.022 124.210 73.088 1.00 40.49 C
ATOM 22 N2 G A1283 7.220 123.486 72.300 1.00 40.08 N
ATOM 23 N3 G A1283 7.508 124.959 74.047 1.00 40.42 N
ATOM 24 C4 G A1283 8.457 125.613 74.740 1.00 40.87 C
ATOM 25 P G A1284 6.770 123.545 79.886 1.00 48.38 P
ATOM 26 OP1 G A1284 5.794 123.014 80.864 1.00 49.95 O
ATOM 27 OP2 G A1284 8.200 123.631 80.261 1.00 49.83 O
ATOM 28 O5' G A1284 6.667 122.699 78.536 1.00 45.29 O
TER
ATOM 1 O3' A B 540 2.806 125.117 72.392 1.00 47.72 O
ATOM 2 P G B 541 2.901 123.837 73.356 1.00 46.25 P
ATOM 3 OP1 G B 541 4.234 123.865 73.978 1.00 49.48 O
ATOM 4 OP2 G B 541 2.497 122.656 72.570 1.00 47.33 O
ATOM 5 O5' G B 541 1.811 124.068 74.499 1.00 46.64 O
ATOM 6 C5' G B 541 2.186 124.609 75.785 1.00 44.49 C
ATOM 7 C4' G B 541 2.099 123.551 76.875 1.00 44.24 C
ATOM 8 O4' G B 541 2.946 123.987 77.968 1.00 43.05 O
ATOM 9 C3' G B 541 0.738 123.305 77.529 1.00 45.27 C
ATOM 10 O3' G B 541 -0.079 122.352 76.850 1.00 47.25 O
ATOM 11 C2' G B 541 1.126 122.796 78.912 1.00 44.60 C
ATOM 12 O2' G B 541 1.494 121.431 78.944 1.00 44.87 O
ATOM 13 C1' G B 541 2.354 123.649 79.209 1.00 42.71 C
ATOM 14 N9 G B 541 2.038 124.884 79.919 1.00 41.04 N
ATOM 15 C8 G B 541 2.191 126.172 79.462 1.00 42.10 C
ATOM 16 N7 G B 541 1.863 127.071 80.348 1.00 41.46 N
ATOM 17 C5 G B 541 1.459 126.332 81.452 1.00 39.76 C
ATOM 18 C6 G B 541 1.001 126.757 82.730 1.00 38.94 C
ATOM 19 O6 G B 541 0.859 127.912 83.159 1.00 36.22 O
ATOM 20 N1 G B 541 0.697 125.674 83.546 1.00 39.19 N
ATOM 21 C2 G B 541 0.816 124.357 83.181 1.00 41.23 C
ATOM 22 N2 G B 541 0.468 123.452 84.102 1.00 43.71 N
ATOM 23 N3 G B 541 1.244 123.951 82.000 1.00 40.67 N
ATOM 24 C4 G B 541 1.548 124.982 81.194 1.00 39.85 C
ATOM 25 P G B 542 -1.678 122.357 77.072 1.00 48.77 P
ATOM 26 OP1 G B 542 -2.167 121.074 76.508 1.00 49.62 O
ATOM 27 OP2 G B 542 -2.246 123.641 76.581 1.00 48.24 O
ATOM 28 O5' G B 542 -1.897 122.296 78.651 1.00 49.65 O
TER
ATOM 2 P G A1283 10.040 128.250 80.671 1.00 46.67 P
ATOM 3 OP1 G A1283 9.474 127.925 81.994 1.00 46.60 O
ATOM 4 OP2 G A1283 11.367 127.720 80.291 1.00 47.16 O
ATOM 5 O5' G A1283 8.985 127.787 79.565 1.00 48.00 O
ATOM 6 C5' G A1283 7.559 127.978 79.771 1.00 48.15 C
ATOM 7 C4' G A1283 6.750 127.274 78.700 1.00 45.23 C
ATOM 8 O4' G A1283 7.120 127.784 77.391 1.00 45.07 O
ATOM 9 C3' G A1283 6.954 125.778 78.549 1.00 44.93 C
ATOM 10 O3' G A1283 6.247 125.016 79.504 1.00 45.34 O
ATOM 11 C2' G A1283 6.415 125.534 77.152 1.00 45.05 C
ATOM 12 O2' G A1283 5.008 125.549 77.108 1.00 47.59 O
ATOM 13 C1' G A1283 6.952 126.759 76.416 1.00 44.75 C
ATOM 14 N9 G A1283 8.244 126.450 75.810 1.00 42.51 N
ATOM 15 C8 G A1283 9.478 126.897 76.203 1.00 41.79 C
ATOM 16 N7 G A1283 10.451 126.398 75.492 1.00 42.53 N
ATOM 17 C5 G A1283 9.819 125.583 74.565 1.00 41.43 C
ATOM 18 C6 G A1283 10.359 124.769 73.530 1.00 42.21 C
ATOM 19 O6 G A1283 11.545 124.592 73.218 1.00 42.68 O
ATOM 20 N1 G A1283 9.360 124.111 72.829 1.00 41.28 N
ATOM 21 C2 G A1283 8.022 124.210 73.088 1.00 40.49 C
ATOM 22 N2 G A1283 7.220 123.486 72.300 1.00 40.08 N
ATOM 23 N3 G A1283 7.508 124.959 74.047 1.00 40.42 N
ATOM 24 C4 G A1283 8.457 125.613 74.740 1.00 40.87 C
ATOM 25 P G A1284 6.770 123.545 79.886 1.00 48.38 P
ATOM 26 OP1 G A1284 5.794 123.014 80.864 1.00 49.95 O
ATOM 27 OP2 G A1284 8.200 123.631 80.261 1.00 49.83 O
ATOM 28 O5' G A1284 6.667 122.699 78.536 1.00 45.29 O
TER
ATOM 1 O3' A B 540 2.806 125.117 72.392 1.00 47.72 O
ATOM 2 P G B 541 2.901 123.837 73.356 1.00 46.25 P
ATOM 3 OP1 G B 541 4.234 123.865 73.978 1.00 49.48 O
ATOM 4 OP2 G B 541 2.497 122.656 72.570 1.00 47.33 O
ATOM 5 O5' G B 541 1.811 124.068 74.499 1.00 46.64 O
ATOM 6 C5' G B 541 2.186 124.609 75.785 1.00 44.49 C
ATOM 7 C4' G B 541 2.099 123.551 76.875 1.00 44.24 C
ATOM 8 O4' G B 541 2.946 123.987 77.968 1.00 43.05 O
ATOM 9 C3' G B 541 0.738 123.305 77.529 1.00 45.27 C
ATOM 10 O3' G B 541 -0.079 122.352 76.850 1.00 47.25 O
ATOM 11 C2' G B 541 1.126 122.796 78.912 1.00 44.60 C
ATOM 12 O2' G B 541 1.494 121.431 78.944 1.00 44.87 O
ATOM 13 C1' G B 541 2.354 123.649 79.209 1.00 42.71 C
ATOM 14 N9 G B 541 2.038 124.884 79.919 1.00 41.04 N
ATOM 15 C8 G B 541 2.191 126.172 79.462 1.00 42.10 C
ATOM 16 N7 G B 541 1.863 127.071 80.348 1.00 41.46 N
ATOM 17 C5 G B 541 1.459 126.332 81.452 1.00 39.76 C
ATOM 18 C6 G B 541 1.001 126.757 82.730 1.00 38.94 C
ATOM 19 O6 G B 541 0.859 127.912 83.159 1.00 36.22 O
ATOM 20 N1 G B 541 0.697 125.674 83.546 1.00 39.19 N
ATOM 21 C2 G B 541 0.816 124.357 83.181 1.00 41.23 C
ATOM 22 N2 G B 541 0.468 123.452 84.102 1.00 43.71 N
ATOM 23 N3 G B 541 1.244 123.951 82.000 1.00 40.67 N
ATOM 24 C4 G B 541 1.548 124.982 81.194 1.00 39.85 C
ATOM 25 P G B 542 -1.678 122.357 77.072 1.00 48.77 P
ATOM 26 OP1 G B 542 -2.167 121.074 76.508 1.00 49.62 O
ATOM 27 OP2 G B 542 -2.246 123.641 76.581 1.00 48.24 O
ATOM 28 O5' G B 542 -1.897 122.296 78.651 1.00 49.65 O
TER
Atoms:
OP1: (9.474,127.925,81.994)
OP2: (11.367,127.720,80.291)
C3': (6.954,125.778,78.549)
C1': (6.952,126.759,76.416)
C5': (7.559,127.978,79.771)
O6: (11.545,124.592,73.218)
O4': (7.120,127.784,77.391)
C8: (9.478,126.897,76.203)
C2: (8.022,124.210,73.088)
C6: (10.359,124.769,73.530)
C5: (9.819,125.583,74.565)
C4: (8.457,125.613,74.740)
P: (10.040,128.250,80.671)
C4': (6.750,127.274,78.700)
C2': (6.415,125.534,77.152)
O2': (5.008,125.549,77.108)
N1: (9.360,124.111,72.829)
N2: (7.220,123.486,72.300)
N3: (7.508,124.959,74.047)
N7: (10.451,126.398,75.492)
N9: (8.244,126.450,75.810)
O5': (8.985,127.787,79.565)
O3': (6.247,125.016,79.504)
OP2: (11.367,127.720,80.291)
C3': (6.954,125.778,78.549)
C1': (6.952,126.759,76.416)
C5': (7.559,127.978,79.771)
O6: (11.545,124.592,73.218)
O4': (7.120,127.784,77.391)
C8: (9.478,126.897,76.203)
C2: (8.022,124.210,73.088)
C6: (10.359,124.769,73.530)
C5: (9.819,125.583,74.565)
C4: (8.457,125.613,74.740)
P: (10.040,128.250,80.671)
C4': (6.750,127.274,78.700)
C2': (6.415,125.534,77.152)
O2': (5.008,125.549,77.108)
N1: (9.360,124.111,72.829)
N2: (7.220,123.486,72.300)
N3: (7.508,124.959,74.047)
N7: (10.451,126.398,75.492)
N9: (8.244,126.450,75.810)
O5': (8.985,127.787,79.565)
O3': (6.247,125.016,79.504)
OP1: (4.234,123.865,73.978)
OP2: (2.497,122.656,72.570)
C3': (0.738,123.305,77.529)
C1': (2.354,123.649,79.209)
C5': (2.186,124.609,75.785)
O6: (0.859,127.912,83.159)
O4': (2.946,123.987,77.968)
C8: (2.191,126.172,79.462)
C2: (0.816,124.357,83.181)
C6: (1.001,126.757,82.730)
C5: (1.459,126.332,81.452)
C4: (1.548,124.982,81.194)
P: (2.901,123.837,73.356)
C4': (2.099,123.551,76.875)
C2': (1.126,122.796,78.912)
O2': (1.494,121.431,78.944)
N1: (0.697,125.674,83.546)
N2: (0.468,123.452,84.102)
N3: (1.244,123.951,82.000)
N7: (1.863,127.071,80.348)
N9: (2.038,124.884,79.919)
O5': (1.811,124.068,74.499)
O3': (-0.079,122.352,76.850)
OP2: (2.497,122.656,72.570)
C3': (0.738,123.305,77.529)
C1': (2.354,123.649,79.209)
C5': (2.186,124.609,75.785)
O6: (0.859,127.912,83.159)
O4': (2.946,123.987,77.968)
C8: (2.191,126.172,79.462)
C2: (0.816,124.357,83.181)
C6: (1.001,126.757,82.730)
C5: (1.459,126.332,81.452)
C4: (1.548,124.982,81.194)
P: (2.901,123.837,73.356)
C4': (2.099,123.551,76.875)
C2': (1.126,122.796,78.912)
O2': (1.494,121.431,78.944)
N1: (0.697,125.674,83.546)
N2: (0.468,123.452,84.102)
N3: (1.244,123.951,82.000)
N7: (1.863,127.071,80.348)
N9: (2.038,124.884,79.919)
O5': (1.811,124.068,74.499)
O3': (-0.079,122.352,76.850)
Image (generated by PyMOL):