ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUT:R13:R42

Extra

PDB:
ATOM 1 O3' A A 12 1.566 -8.133 16.977 1.00 70.00 O
ATOM 2 P G A 13 1.929 -7.535 15.531 1.00 67.29 P
ATOM 3 OP1 G A 13 2.652 -8.576 14.772 1.00 67.82 O
ATOM 4 OP2 G A 13 2.553 -6.207 15.710 1.00 68.05 O
ATOM 5 O5' G A 13 0.502 -7.323 14.855 1.00 64.27 O
ATOM 6 C5' G A 13 -0.204 -8.446 14.357 1.00 61.96 C
ATOM 7 C4' G A 13 -0.885 -8.050 13.072 1.00 59.09 C
ATOM 8 O4' G A 13 -2.018 -7.201 13.374 1.00 57.59 O
ATOM 9 C3' G A 13 -0.018 -7.204 12.157 1.00 56.62 C
ATOM 10 O3' G A 13 0.861 -8.052 11.436 1.00 58.32 O
ATOM 11 C2' G A 13 -1.098 -6.545 11.309 1.00 53.63 C
ATOM 12 O2' G A 13 -1.651 -7.408 10.339 1.00 51.40 O
ATOM 13 C1' G A 13 -2.126 -6.208 12.378 1.00 53.63 C
ATOM 14 N9 G A 13 -1.883 -4.891 12.959 1.00 51.93 N
ATOM 15 C8 G A 13 -1.075 -4.546 14.021 1.00 52.60 C
ATOM 16 N7 G A 13 -1.077 -3.265 14.283 1.00 51.77 N
ATOM 17 C5 G A 13 -1.935 -2.730 13.330 1.00 49.09 C
ATOM 18 C6 G A 13 -2.338 -1.393 13.102 1.00 47.63 C
ATOM 19 O6 G A 13 -2.004 -0.380 13.726 1.00 47.38 O
ATOM 20 N1 G A 13 -3.226 -1.291 12.030 1.00 47.38 N
ATOM 21 C2 G A 13 -3.665 -2.357 11.272 1.00 46.71 C
ATOM 22 N2 G A 13 -4.518 -2.087 10.279 1.00 47.49 N
ATOM 23 N3 G A 13 -3.295 -3.610 11.469 1.00 45.92 N
ATOM 24 C4 G A 13 -2.435 -3.719 12.510 1.00 48.96 C
ATOM 25 P C A 14 1.810 -7.518 10.266 1.00 57.32 P
ATOM 26 OP1 C A 14 2.860 -8.540 10.041 1.00 57.94 O
ATOM 27 OP2 C A 14 2.212 -6.125 10.570 1.00 56.06 O
ATOM 28 O5' C A 14 0.779 -7.545 9.037 1.00 54.87 O
TER

ATOM 1 O3' A B 41 -5.530 -3.251 6.150 1.00 47.41 O
ATOM 2 P G B 42 -5.431 -4.689 6.852 1.00 48.49 P
ATOM 3 OP1 G B 42 -5.346 -4.460 8.307 1.00 51.51 O
ATOM 4 OP2 G B 42 -4.352 -5.455 6.193 1.00 48.08 O
ATOM 5 O5' G B 42 -6.858 -5.372 6.585 1.00 48.02 O
ATOM 6 C5' G B 42 -7.168 -6.073 5.381 1.00 48.32 C
ATOM 7 C4' G B 42 -7.309 -7.558 5.666 1.00 50.12 C
ATOM 8 O4' G B 42 -8.319 -7.793 6.687 1.00 51.66 O
ATOM 9 C3' G B 42 -7.738 -8.430 4.493 1.00 49.68 C
ATOM 10 O3' G B 42 -6.607 -8.768 3.689 1.00 47.88 O
ATOM 11 C2' G B 42 -8.299 -9.640 5.238 1.00 50.99 C
ATOM 12 O2' G B 42 -7.293 -10.487 5.762 1.00 51.46 O
ATOM 13 C1' G B 42 -9.040 -8.978 6.396 1.00 50.92 C
ATOM 14 N9 G B 42 -10.427 -8.619 6.100 1.00 49.92 N
ATOM 15 C8 G B 42 -10.960 -7.355 6.115 1.00 49.09 C
ATOM 16 N7 G B 42 -12.223 -7.308 5.813 1.00 48.90 N
ATOM 17 C5 G B 42 -12.549 -8.628 5.584 1.00 50.08 C
ATOM 18 C6 G B 42 -13.786 -9.185 5.215 1.00 52.81 C
ATOM 19 O6 G B 42 -14.845 -8.588 5.024 1.00 55.08 O
ATOM 20 N1 G B 42 -13.721 -10.563 5.066 1.00 54.27 N
ATOM 21 C2 G B 42 -12.581 -11.305 5.256 1.00 55.46 C
ATOM 22 N2 G B 42 -12.700 -12.627 5.078 1.00 59.64 N
ATOM 23 N3 G B 42 -11.407 -10.792 5.608 1.00 52.73 N
ATOM 24 C4 G B 42 -11.463 -9.449 5.752 1.00 50.25 C
ATOM 25 P C B 43 -6.428 -8.199 2.201 1.00 46.78 P
ATOM 26 OP1 C B 43 -5.089 -8.614 1.730 1.00 45.70 O
ATOM 27 OP2 C B 43 -6.778 -6.765 2.198 1.00 46.93 O
ATOM 28 O5' C B 43 -7.549 -8.986 1.370 1.00 48.15 O
TER

Atoms:
OP1: (2.652,-8.576,14.772)
OP2: (2.553,-6.207,15.710)
C3': (-0.018,-7.204,12.157)
C1': (-2.126,-6.208,12.378)
C5': (-0.204,-8.446,14.357)
O6: (-2.004,-0.380,13.726)
O4': (-2.018,-7.201,13.374)
C8: (-1.075,-4.546,14.021)
C2: (-3.665,-2.357,11.272)
C6: (-2.338,-1.393,13.102)
C5: (-1.935,-2.730,13.330)
C4: (-2.435,-3.719,12.510)
P: (1.929,-7.535,15.531)
C4': (-0.885,-8.050,13.072)
C2': (-1.098,-6.545,11.309)
O2': (-1.651,-7.408,10.339)
N1: (-3.226,-1.291,12.030)
N2: (-4.518,-2.087,10.279)
N3: (-3.295,-3.610,11.469)
N7: (-1.077,-3.265,14.283)
N9: (-1.883,-4.891,12.959)
O5': (0.502,-7.323,14.855)
O3': (0.861,-8.052,11.436)
OP1: (-5.346,-4.460,8.307)
OP2: (-4.352,-5.455,6.193)
C3': (-7.738,-8.430,4.493)
C1': (-9.040,-8.978,6.396)
C5': (-7.168,-6.073,5.381)
O6: (-14.845,-8.588,5.024)
O4': (-8.319,-7.793,6.687)
C8: (-10.960,-7.355,6.115)
C2: (-12.581,-11.305,5.256)
C6: (-13.786,-9.185,5.215)
C5: (-12.549,-8.628,5.584)
C4: (-11.463,-9.449,5.752)
P: (-5.431,-4.689,6.852)
C4': (-7.309,-7.558,5.666)
C2': (-8.299,-9.640,5.238)
O2': (-7.293,-10.487,5.762)
N1: (-13.721,-10.563,5.066)
N2: (-12.700,-12.627,5.078)
N3: (-11.407,-10.792,5.608)
N7: (-12.223,-7.308,5.813)
N9: (-10.427,-8.619,6.100)
O5': (-6.858,-5.372,6.585)
O3': (-6.607,-8.768,3.689)
Image (generated by PyMOL):
PyMOL image
show in jmol