ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:B23:B22

Extra

PDB:
ATOM 1 O3' U A 22 60.485 -0.610 104.969 1.00140.77 O
ATOM 2 P U A 23 61.885 -0.478 104.207 1.00142.31 P
ATOM 3 OP1 U A 23 62.403 -1.911 104.253 1.00142.60 O
ATOM 4 OP2 U A 23 62.723 0.643 104.420 1.00142.34 O
ATOM 5 O5' U A 23 61.243 -0.180 102.806 1.00142.73 O
ATOM 6 C5' U A 23 61.414 -1.145 101.770 1.00142.85 C
ATOM 7 C4' U A 23 60.304 -1.010 100.740 1.00142.26 C
ATOM 8 O4' U A 23 59.014 -1.265 101.378 1.00143.14 O
ATOM 9 C3' U A 23 60.178 0.427 100.269 1.00141.48 C
ATOM 10 O3' U A 23 61.155 0.749 99.284 1.00139.86 O
ATOM 11 C2' U A 23 58.740 0.436 99.772 1.00141.94 C
ATOM 12 O2' U A 23 58.569 -0.287 98.547 1.00142.10 O
ATOM 13 C1' U A 23 58.080 -0.372 100.879 1.00143.01 C
ATOM 14 N1 U A 23 57.613 0.509 101.962 1.00143.67 N
ATOM 15 C2 U A 23 56.368 1.118 101.750 1.00144.03 C
ATOM 16 O2 U A 23 55.744 0.946 100.750 1.00144.31 O
ATOM 17 N3 U A 23 55.924 1.947 102.770 1.00144.07 N
ATOM 18 C4 U A 23 56.583 2.245 103.921 1.00143.78 C
ATOM 19 O4 U A 23 56.131 3.138 104.666 1.00143.24 O
ATOM 20 C5 U A 23 57.826 1.601 104.061 1.00143.44 C
ATOM 21 C6 U A 23 58.299 0.773 103.128 1.00143.46 C
ATOM 22 P G A 24 61.718 2.240 99.229 1.00137.86 P
ATOM 23 OP1 G A 24 62.614 2.095 98.071 1.00138.26 O
ATOM 24 OP2 G A 24 62.186 2.801 100.498 1.00137.37 O
ATOM 25 O5' G A 24 60.463 3.137 98.869 1.00135.04 O
TER

ATOM 1 O3' G B 21 60.772 4.848 108.009 1.00115.96 O
ATOM 2 P U B 22 61.894 3.738 107.945 1.00120.52 P
ATOM 3 OP1 U B 22 62.342 3.414 109.297 1.00120.04 O
ATOM 4 OP2 U B 22 62.782 4.172 106.886 1.00120.79 O
ATOM 5 O5' U B 22 61.157 2.450 107.396 1.00124.82 O
ATOM 6 C5' U B 22 62.031 1.310 107.205 1.00132.05 C
ATOM 7 C4' U B 22 61.239 0.020 107.291 1.00136.75 C
ATOM 8 O4' U B 22 60.480 -0.055 108.534 1.00138.59 O
ATOM 9 C3' U B 22 60.132 0.004 106.227 1.00138.89 C
ATOM 10 O3' U B 22 60.485 -0.610 104.969 1.00140.77 O
ATOM 11 C2' U B 22 59.046 -0.927 106.780 1.00139.70 C
ATOM 12 O2' U B 22 59.400 -2.238 106.404 1.00139.63 O
ATOM 13 C1' U B 22 59.216 -0.632 108.262 1.00140.50 C
ATOM 14 N1 U B 22 58.150 0.270 108.690 1.00142.51 N
ATOM 15 C2 U B 22 56.887 -0.269 108.957 1.00143.39 C
ATOM 16 O2 U B 22 56.644 -1.433 108.861 1.00143.90 O
ATOM 17 N3 U B 22 55.933 0.683 109.260 1.00143.95 N
ATOM 18 C4 U B 22 56.106 2.054 109.305 1.00143.90 C
ATOM 19 O4 U B 22 55.097 2.768 109.472 1.00143.94 O
ATOM 20 C5 U B 22 57.408 2.482 109.008 1.00143.65 C
ATOM 21 C6 U B 22 58.356 1.605 108.748 1.00143.27 C
ATOM 22 P U B 23 61.885 -0.478 104.207 1.00142.31 P
ATOM 23 OP1 U B 23 62.403 -1.911 104.253 1.00142.60 O
ATOM 24 OP2 U B 23 62.723 0.643 104.420 1.00142.34 O
ATOM 25 O5' U B 23 61.243 -0.180 102.806 1.00142.73 O
TER

Atoms:
C4: (56.583,2.245,103.921)
N3: (55.924,1.947,102.770)
OP1: (62.403,-1.911,104.253)
OP2: (62.723,0.643,104.420)
C2: (56.368,1.118,101.750)
C1': (58.080,-0.372,100.879)
C3': (60.178,0.427,100.269)
O5': (61.243,-0.180,102.806)
O4': (59.014,-1.265,101.378)
C5': (61.414,-1.145,101.770)
P: (61.885,-0.478,104.207)
C4': (60.304,-1.010,100.740)
C2': (58.740,0.436,99.772)
O2': (58.569,-0.287,98.547)
N1: (57.613,0.509,101.962)
O4: (56.131,3.138,104.666)
O2: (55.744,0.946,100.750)
C6: (58.299,0.773,103.128)
C5: (57.826,1.601,104.061)
O3': (61.155,0.749,99.284)
C4: (56.106,2.054,109.305)
N3: (55.933,0.683,109.260)
OP1: (62.342,3.414,109.297)
OP2: (62.782,4.172,106.886)
C2: (56.887,-0.269,108.957)
C1': (59.216,-0.632,108.262)
C3': (60.132,0.004,106.227)
O5': (61.157,2.450,107.396)
O4': (60.480,-0.055,108.534)
C5': (62.031,1.310,107.205)
P: (61.894,3.738,107.945)
C4': (61.239,0.020,107.291)
C2': (59.046,-0.927,106.780)
O2': (59.400,-2.238,106.404)
N1: (58.150,0.270,108.690)
O4: (55.097,2.768,109.472)
O2: (56.644,-1.433,108.861)
C6: (58.356,1.605,108.748)
C5: (57.408,2.482,109.008)
O3': (60.485,-0.610,104.969)
Image (generated by PyMOL):
PyMOL image
show in jmol