Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B23:B22
Extra
PDB:
ATOM 1 O3' U A 22 60.504 -0.139 104.629 1.00143.04 O
ATOM 2 P U A 23 61.980 -0.230 104.142 1.00144.55 P
ATOM 3 OP1 U A 23 62.218 -1.680 104.418 1.00145.07 O
ATOM 4 OP2 U A 23 62.412 0.784 104.992 1.00144.71 O
ATOM 5 O5' U A 23 61.885 -0.099 102.531 1.00144.79 O
ATOM 6 C5' U A 23 61.673 -1.124 101.569 1.00145.07 C
ATOM 7 C4' U A 23 60.443 -0.803 100.724 1.00144.96 C
ATOM 8 O4' U A 23 59.132 -0.962 101.403 1.00145.91 O
ATOM 9 C3' U A 23 60.303 0.593 100.014 1.00144.34 C
ATOM 10 O3' U A 23 61.096 0.974 98.897 1.00142.34 O
ATOM 11 C2' U A 23 58.770 0.705 99.640 1.00145.10 C
ATOM 12 O2' U A 23 58.487 -0.054 98.478 1.00145.32 O
ATOM 13 C1' U A 23 58.120 -0.103 100.772 1.00146.15 C
ATOM 14 N1 U A 23 57.574 0.733 101.829 1.00147.19 N
ATOM 15 C2 U A 23 56.396 1.346 101.603 1.00147.85 C
ATOM 16 O2 U A 23 55.719 1.156 100.598 1.00148.35 O
ATOM 17 N3 U A 23 55.992 2.251 102.559 1.00148.08 N
ATOM 18 C4 U A 23 56.662 2.554 103.699 1.00147.87 C
ATOM 19 O4 U A 23 56.207 3.344 104.549 1.00147.57 O
ATOM 20 C5 U A 23 57.876 1.819 103.866 1.00147.45 C
ATOM 21 C6 U A 23 58.271 0.945 102.975 1.00147.21 C
ATOM 22 P G A 24 61.844 2.380 98.883 1.00139.95 P
ATOM 23 OP1 G A 24 62.729 2.675 97.751 1.00140.11 O
ATOM 24 OP2 G A 24 62.188 2.566 100.167 1.00139.66 O
ATOM 25 O5' G A 24 60.698 3.405 98.742 1.00136.89 O
TER
ATOM 1 O3' G B 21 60.850 5.052 107.922 1.00117.85 O
ATOM 2 P U B 22 62.248 4.195 107.818 1.00122.58 P
ATOM 3 OP1 U B 22 62.721 4.035 109.246 1.00121.71 O
ATOM 4 OP2 U B 22 63.183 4.781 106.849 1.00122.88 O
ATOM 5 O5' U B 22 61.677 2.788 107.227 1.00126.62 O
ATOM 6 C5' U B 22 62.326 1.365 107.179 1.00134.08 C
ATOM 7 C4' U B 22 61.326 0.216 107.069 1.00138.87 C
ATOM 8 O4' U B 22 60.644 0.223 108.310 1.00140.55 O
ATOM 9 C3' U B 22 60.178 0.219 105.991 1.00141.04 C
ATOM 10 O3' U B 22 60.504 -0.139 104.629 1.00143.04 O
ATOM 11 C2' U B 22 59.143 -0.760 106.642 1.00141.68 C
ATOM 12 O2' U B 22 59.448 -2.258 106.622 1.00141.76 O
ATOM 13 C1' U B 22 59.339 -0.389 108.133 1.00142.32 C
ATOM 14 N1 U B 22 58.306 0.535 108.598 1.00143.91 N
ATOM 15 C2 U B 22 57.082 0.013 108.811 1.00144.57 C
ATOM 16 O2 U B 22 56.844 -1.197 108.777 1.00144.87 O
ATOM 17 N3 U B 22 56.061 0.896 109.053 1.00144.93 N
ATOM 18 C4 U B 22 56.159 2.251 109.100 1.00144.99 C
ATOM 19 O4 U B 22 55.196 2.986 109.440 1.00145.16 O
ATOM 20 C5 U B 22 57.506 2.715 108.939 1.00144.76 C
ATOM 21 C6 U B 22 58.520 1.866 108.730 1.00144.49 C
ATOM 22 P U B 23 61.980 -0.230 104.142 1.00144.55 P
ATOM 23 OP1 U B 23 62.218 -1.680 104.418 1.00145.07 O
ATOM 24 OP2 U B 23 62.412 0.784 104.992 1.00144.71 O
ATOM 25 O5' U B 23 61.885 -0.099 102.531 1.00144.79 O
TER
ATOM 2 P U A 23 61.980 -0.230 104.142 1.00144.55 P
ATOM 3 OP1 U A 23 62.218 -1.680 104.418 1.00145.07 O
ATOM 4 OP2 U A 23 62.412 0.784 104.992 1.00144.71 O
ATOM 5 O5' U A 23 61.885 -0.099 102.531 1.00144.79 O
ATOM 6 C5' U A 23 61.673 -1.124 101.569 1.00145.07 C
ATOM 7 C4' U A 23 60.443 -0.803 100.724 1.00144.96 C
ATOM 8 O4' U A 23 59.132 -0.962 101.403 1.00145.91 O
ATOM 9 C3' U A 23 60.303 0.593 100.014 1.00144.34 C
ATOM 10 O3' U A 23 61.096 0.974 98.897 1.00142.34 O
ATOM 11 C2' U A 23 58.770 0.705 99.640 1.00145.10 C
ATOM 12 O2' U A 23 58.487 -0.054 98.478 1.00145.32 O
ATOM 13 C1' U A 23 58.120 -0.103 100.772 1.00146.15 C
ATOM 14 N1 U A 23 57.574 0.733 101.829 1.00147.19 N
ATOM 15 C2 U A 23 56.396 1.346 101.603 1.00147.85 C
ATOM 16 O2 U A 23 55.719 1.156 100.598 1.00148.35 O
ATOM 17 N3 U A 23 55.992 2.251 102.559 1.00148.08 N
ATOM 18 C4 U A 23 56.662 2.554 103.699 1.00147.87 C
ATOM 19 O4 U A 23 56.207 3.344 104.549 1.00147.57 O
ATOM 20 C5 U A 23 57.876 1.819 103.866 1.00147.45 C
ATOM 21 C6 U A 23 58.271 0.945 102.975 1.00147.21 C
ATOM 22 P G A 24 61.844 2.380 98.883 1.00139.95 P
ATOM 23 OP1 G A 24 62.729 2.675 97.751 1.00140.11 O
ATOM 24 OP2 G A 24 62.188 2.566 100.167 1.00139.66 O
ATOM 25 O5' G A 24 60.698 3.405 98.742 1.00136.89 O
TER
ATOM 1 O3' G B 21 60.850 5.052 107.922 1.00117.85 O
ATOM 2 P U B 22 62.248 4.195 107.818 1.00122.58 P
ATOM 3 OP1 U B 22 62.721 4.035 109.246 1.00121.71 O
ATOM 4 OP2 U B 22 63.183 4.781 106.849 1.00122.88 O
ATOM 5 O5' U B 22 61.677 2.788 107.227 1.00126.62 O
ATOM 6 C5' U B 22 62.326 1.365 107.179 1.00134.08 C
ATOM 7 C4' U B 22 61.326 0.216 107.069 1.00138.87 C
ATOM 8 O4' U B 22 60.644 0.223 108.310 1.00140.55 O
ATOM 9 C3' U B 22 60.178 0.219 105.991 1.00141.04 C
ATOM 10 O3' U B 22 60.504 -0.139 104.629 1.00143.04 O
ATOM 11 C2' U B 22 59.143 -0.760 106.642 1.00141.68 C
ATOM 12 O2' U B 22 59.448 -2.258 106.622 1.00141.76 O
ATOM 13 C1' U B 22 59.339 -0.389 108.133 1.00142.32 C
ATOM 14 N1 U B 22 58.306 0.535 108.598 1.00143.91 N
ATOM 15 C2 U B 22 57.082 0.013 108.811 1.00144.57 C
ATOM 16 O2 U B 22 56.844 -1.197 108.777 1.00144.87 O
ATOM 17 N3 U B 22 56.061 0.896 109.053 1.00144.93 N
ATOM 18 C4 U B 22 56.159 2.251 109.100 1.00144.99 C
ATOM 19 O4 U B 22 55.196 2.986 109.440 1.00145.16 O
ATOM 20 C5 U B 22 57.506 2.715 108.939 1.00144.76 C
ATOM 21 C6 U B 22 58.520 1.866 108.730 1.00144.49 C
ATOM 22 P U B 23 61.980 -0.230 104.142 1.00144.55 P
ATOM 23 OP1 U B 23 62.218 -1.680 104.418 1.00145.07 O
ATOM 24 OP2 U B 23 62.412 0.784 104.992 1.00144.71 O
ATOM 25 O5' U B 23 61.885 -0.099 102.531 1.00144.79 O
TER
Atoms:
C4: (56.662,2.554,103.699)
N3: (55.992,2.251,102.559)
OP1: (62.218,-1.680,104.418)
OP2: (62.412,0.784,104.992)
C2: (56.396,1.346,101.603)
C1': (58.120,-0.103,100.772)
C3': (60.303,0.593,100.014)
O5': (61.885,-0.099,102.531)
O4': (59.132,-0.962,101.403)
C5': (61.673,-1.124,101.569)
P: (61.980,-0.230,104.142)
C4': (60.443,-0.803,100.724)
C2': (58.770,0.705,99.640)
O2': (58.487,-0.054,98.478)
N1: (57.574,0.733,101.829)
O4: (56.207,3.344,104.549)
O2: (55.719,1.156,100.598)
C6: (58.271,0.945,102.975)
C5: (57.876,1.819,103.866)
O3': (61.096,0.974,98.897)
N3: (55.992,2.251,102.559)
OP1: (62.218,-1.680,104.418)
OP2: (62.412,0.784,104.992)
C2: (56.396,1.346,101.603)
C1': (58.120,-0.103,100.772)
C3': (60.303,0.593,100.014)
O5': (61.885,-0.099,102.531)
O4': (59.132,-0.962,101.403)
C5': (61.673,-1.124,101.569)
P: (61.980,-0.230,104.142)
C4': (60.443,-0.803,100.724)
C2': (58.770,0.705,99.640)
O2': (58.487,-0.054,98.478)
N1: (57.574,0.733,101.829)
O4: (56.207,3.344,104.549)
O2: (55.719,1.156,100.598)
C6: (58.271,0.945,102.975)
C5: (57.876,1.819,103.866)
O3': (61.096,0.974,98.897)
C4: (56.159,2.251,109.100)
N3: (56.061,0.896,109.053)
OP1: (62.721,4.035,109.246)
OP2: (63.183,4.781,106.849)
C2: (57.082,0.013,108.811)
C1': (59.339,-0.389,108.133)
C3': (60.178,0.219,105.991)
O5': (61.677,2.788,107.227)
O4': (60.644,0.223,108.310)
C5': (62.326,1.365,107.179)
P: (62.248,4.195,107.818)
C4': (61.326,0.216,107.069)
C2': (59.143,-0.760,106.642)
O2': (59.448,-2.258,106.622)
N1: (58.306,0.535,108.598)
O4: (55.196,2.986,109.440)
O2: (56.844,-1.197,108.777)
C6: (58.520,1.866,108.730)
C5: (57.506,2.715,108.939)
O3': (60.504,-0.139,104.629)
N3: (56.061,0.896,109.053)
OP1: (62.721,4.035,109.246)
OP2: (63.183,4.781,106.849)
C2: (57.082,0.013,108.811)
C1': (59.339,-0.389,108.133)
C3': (60.178,0.219,105.991)
O5': (61.677,2.788,107.227)
O4': (60.644,0.223,108.310)
C5': (62.326,1.365,107.179)
P: (62.248,4.195,107.818)
C4': (61.326,0.216,107.069)
C2': (59.143,-0.760,106.642)
O2': (59.448,-2.258,106.622)
N1: (58.306,0.535,108.598)
O4: (55.196,2.986,109.440)
O2: (56.844,-1.197,108.777)
C6: (58.520,1.866,108.730)
C5: (57.506,2.715,108.939)
O3': (60.504,-0.139,104.629)
Image (generated by PyMOL):