Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8V:R4:R3
Extra
PDB:
ATOM 1 O3' U A 3 15.720 17.270 10.818 0.75 61.45 O
ATOM 2 P U A 4 16.118 15.787 11.293 1.00 68.11 P
ATOM 3 OP1 U A 4 14.899 14.939 11.410 0.47 71.89 O
ATOM 4 OP2 U A 4 17.022 15.930 12.461 1.00 60.43 O
ATOM 5 O5' U A 4 16.981 15.238 10.079 0.79 67.17 O
ATOM 6 C5' U A 4 18.380 15.106 10.228 0.35 67.85 C
ATOM 7 C4' U A 4 18.986 14.396 9.052 1.00 62.21 C
ATOM 8 O4' U A 4 18.953 15.251 7.877 1.00 56.93 O
ATOM 9 C3' U A 4 20.455 14.127 9.325 0.94 64.71 C
ATOM 10 O3' U A 4 20.608 12.853 9.938 0.13 71.51 O
ATOM 11 C2' U A 4 21.094 14.251 7.952 1.00 58.46 C
ATOM 12 O2' U A 4 20.942 13.069 7.193 0.60 61.37 O
ATOM 13 C1' U A 4 20.264 15.393 7.357 1.00 52.59 C
ATOM 14 N1 U A 4 20.751 16.727 7.741 0.94 53.49 N
ATOM 15 C2 U A 4 21.967 17.144 7.233 1.00 50.74 C
ATOM 16 O2 U A 4 22.654 16.448 6.507 0.84 51.84 O
ATOM 17 N3 U A 4 22.348 18.409 7.608 1.00 47.43 N
ATOM 18 C4 U A 4 21.651 19.279 8.418 1.00 45.77 C
ATOM 19 O4 U A 4 22.090 20.410 8.599 0.97 49.81 O
ATOM 20 C5 U A 4 20.412 18.770 8.919 1.00 45.66 C
ATOM 21 C6 U A 4 20.014 17.544 8.574 1.00 47.42 C
ATOM 22 P U A 5 20.389 12.690 11.525 1.00 66.57 P
ATOM 23 OP1 U A 5 19.914 13.957 12.116 0.90 67.83 O
ATOM 24 OP2 U A 5 21.633 12.065 12.037 0.45 71.35 O
ATOM 25 O5' U A 5 19.227 11.603 11.633 1.00 68.43 O
TER
ATOM 1 O3' U B 2 19.315 23.094 10.959 0.01 79.85 O
ATOM 2 P U B 3 18.378 22.798 9.666 1.00 69.19 P
ATOM 3 OP1 U B 3 19.207 22.134 8.630 1.00 71.38 O
ATOM 4 OP2 U B 3 17.595 24.013 9.303 0.80 73.88 O
ATOM 5 O5' U B 3 17.321 21.746 10.210 1.00 61.42 O
ATOM 6 C5' U B 3 17.697 20.387 10.451 1.00 61.34 C
ATOM 7 C4' U B 3 16.467 19.544 10.602 0.49 61.24 C
ATOM 8 O4' U B 3 15.455 20.072 9.703 1.00 57.18 O
ATOM 9 C3' U B 3 16.690 18.099 10.177 1.00 59.37 C
ATOM 10 O3' U B 3 15.720 17.270 10.818 0.75 61.45 O
ATOM 11 C2' U B 3 16.413 18.189 8.680 1.00 49.68 C
ATOM 12 O2' U B 3 16.079 16.962 8.077 0.85 53.59 O
ATOM 13 C1' U B 3 15.218 19.137 8.678 1.00 47.42 C
ATOM 14 N1 U B 3 15.006 19.868 7.425 1.00 36.04 N
ATOM 15 C2 U B 3 13.907 19.506 6.686 0.99 29.26 C
ATOM 16 O2 U B 3 13.120 18.644 7.062 0.98 22.45 O
ATOM 17 N3 U B 3 13.752 20.183 5.503 1.00 17.23 N
ATOM 18 C4 U B 3 14.564 21.172 5.005 1.00 28.65 C
ATOM 19 O4 U B 3 14.337 21.632 3.885 1.00 25.60 O
ATOM 20 C5 U B 3 15.674 21.513 5.847 0.93 31.05 C
ATOM 21 C6 U B 3 15.854 20.859 7.002 1.00 29.89 C
ATOM 22 P U B 4 16.118 15.787 11.293 1.00 68.11 P
ATOM 23 OP1 U B 4 14.899 14.939 11.410 0.47 71.89 O
ATOM 24 OP2 U B 4 17.022 15.930 12.461 1.00 60.43 O
ATOM 25 O5' U B 4 16.981 15.238 10.079 0.79 67.17 O
TER
ATOM 2 P U A 4 16.118 15.787 11.293 1.00 68.11 P
ATOM 3 OP1 U A 4 14.899 14.939 11.410 0.47 71.89 O
ATOM 4 OP2 U A 4 17.022 15.930 12.461 1.00 60.43 O
ATOM 5 O5' U A 4 16.981 15.238 10.079 0.79 67.17 O
ATOM 6 C5' U A 4 18.380 15.106 10.228 0.35 67.85 C
ATOM 7 C4' U A 4 18.986 14.396 9.052 1.00 62.21 C
ATOM 8 O4' U A 4 18.953 15.251 7.877 1.00 56.93 O
ATOM 9 C3' U A 4 20.455 14.127 9.325 0.94 64.71 C
ATOM 10 O3' U A 4 20.608 12.853 9.938 0.13 71.51 O
ATOM 11 C2' U A 4 21.094 14.251 7.952 1.00 58.46 C
ATOM 12 O2' U A 4 20.942 13.069 7.193 0.60 61.37 O
ATOM 13 C1' U A 4 20.264 15.393 7.357 1.00 52.59 C
ATOM 14 N1 U A 4 20.751 16.727 7.741 0.94 53.49 N
ATOM 15 C2 U A 4 21.967 17.144 7.233 1.00 50.74 C
ATOM 16 O2 U A 4 22.654 16.448 6.507 0.84 51.84 O
ATOM 17 N3 U A 4 22.348 18.409 7.608 1.00 47.43 N
ATOM 18 C4 U A 4 21.651 19.279 8.418 1.00 45.77 C
ATOM 19 O4 U A 4 22.090 20.410 8.599 0.97 49.81 O
ATOM 20 C5 U A 4 20.412 18.770 8.919 1.00 45.66 C
ATOM 21 C6 U A 4 20.014 17.544 8.574 1.00 47.42 C
ATOM 22 P U A 5 20.389 12.690 11.525 1.00 66.57 P
ATOM 23 OP1 U A 5 19.914 13.957 12.116 0.90 67.83 O
ATOM 24 OP2 U A 5 21.633 12.065 12.037 0.45 71.35 O
ATOM 25 O5' U A 5 19.227 11.603 11.633 1.00 68.43 O
TER
ATOM 1 O3' U B 2 19.315 23.094 10.959 0.01 79.85 O
ATOM 2 P U B 3 18.378 22.798 9.666 1.00 69.19 P
ATOM 3 OP1 U B 3 19.207 22.134 8.630 1.00 71.38 O
ATOM 4 OP2 U B 3 17.595 24.013 9.303 0.80 73.88 O
ATOM 5 O5' U B 3 17.321 21.746 10.210 1.00 61.42 O
ATOM 6 C5' U B 3 17.697 20.387 10.451 1.00 61.34 C
ATOM 7 C4' U B 3 16.467 19.544 10.602 0.49 61.24 C
ATOM 8 O4' U B 3 15.455 20.072 9.703 1.00 57.18 O
ATOM 9 C3' U B 3 16.690 18.099 10.177 1.00 59.37 C
ATOM 10 O3' U B 3 15.720 17.270 10.818 0.75 61.45 O
ATOM 11 C2' U B 3 16.413 18.189 8.680 1.00 49.68 C
ATOM 12 O2' U B 3 16.079 16.962 8.077 0.85 53.59 O
ATOM 13 C1' U B 3 15.218 19.137 8.678 1.00 47.42 C
ATOM 14 N1 U B 3 15.006 19.868 7.425 1.00 36.04 N
ATOM 15 C2 U B 3 13.907 19.506 6.686 0.99 29.26 C
ATOM 16 O2 U B 3 13.120 18.644 7.062 0.98 22.45 O
ATOM 17 N3 U B 3 13.752 20.183 5.503 1.00 17.23 N
ATOM 18 C4 U B 3 14.564 21.172 5.005 1.00 28.65 C
ATOM 19 O4 U B 3 14.337 21.632 3.885 1.00 25.60 O
ATOM 20 C5 U B 3 15.674 21.513 5.847 0.93 31.05 C
ATOM 21 C6 U B 3 15.854 20.859 7.002 1.00 29.89 C
ATOM 22 P U B 4 16.118 15.787 11.293 1.00 68.11 P
ATOM 23 OP1 U B 4 14.899 14.939 11.410 0.47 71.89 O
ATOM 24 OP2 U B 4 17.022 15.930 12.461 1.00 60.43 O
ATOM 25 O5' U B 4 16.981 15.238 10.079 0.79 67.17 O
TER
Atoms:
C4: (21.651,19.279,8.418)
N3: (22.348,18.409,7.608)
OP1: (14.899,14.939,11.410)
OP2: (17.022,15.930,12.461)
C2: (21.967,17.144,7.233)
C1': (20.264,15.393,7.357)
C3': (20.455,14.127,9.325)
O5': (16.981,15.238,10.079)
O4': (18.953,15.251,7.877)
C5': (18.380,15.106,10.228)
P: (16.118,15.787,11.293)
C4': (18.986,14.396,9.052)
C2': (21.094,14.251,7.952)
O2': (20.942,13.069,7.193)
N1: (20.751,16.727,7.741)
O4: (22.090,20.410,8.599)
O2: (22.654,16.448,6.507)
C6: (20.014,17.544,8.574)
C5: (20.412,18.770,8.919)
O3': (20.608,12.853,9.938)
N3: (22.348,18.409,7.608)
OP1: (14.899,14.939,11.410)
OP2: (17.022,15.930,12.461)
C2: (21.967,17.144,7.233)
C1': (20.264,15.393,7.357)
C3': (20.455,14.127,9.325)
O5': (16.981,15.238,10.079)
O4': (18.953,15.251,7.877)
C5': (18.380,15.106,10.228)
P: (16.118,15.787,11.293)
C4': (18.986,14.396,9.052)
C2': (21.094,14.251,7.952)
O2': (20.942,13.069,7.193)
N1: (20.751,16.727,7.741)
O4: (22.090,20.410,8.599)
O2: (22.654,16.448,6.507)
C6: (20.014,17.544,8.574)
C5: (20.412,18.770,8.919)
O3': (20.608,12.853,9.938)
C4: (14.564,21.172,5.005)
N3: (13.752,20.183,5.503)
OP1: (19.207,22.134,8.630)
OP2: (17.595,24.013,9.303)
C2: (13.907,19.506,6.686)
C1': (15.218,19.137,8.678)
C3': (16.690,18.099,10.177)
O5': (17.321,21.746,10.210)
O4': (15.455,20.072,9.703)
C5': (17.697,20.387,10.451)
P: (18.378,22.798,9.666)
C4': (16.467,19.544,10.602)
C2': (16.413,18.189,8.680)
O2': (16.079,16.962,8.077)
N1: (15.006,19.868,7.425)
O4: (14.337,21.632,3.885)
O2: (13.120,18.644,7.062)
C6: (15.854,20.859,7.002)
C5: (15.674,21.513,5.847)
O3': (15.720,17.270,10.818)
N3: (13.752,20.183,5.503)
OP1: (19.207,22.134,8.630)
OP2: (17.595,24.013,9.303)
C2: (13.907,19.506,6.686)
C1': (15.218,19.137,8.678)
C3': (16.690,18.099,10.177)
O5': (17.321,21.746,10.210)
O4': (15.455,20.072,9.703)
C5': (17.697,20.387,10.451)
P: (18.378,22.798,9.666)
C4': (16.467,19.544,10.602)
C2': (16.413,18.189,8.680)
O2': (16.079,16.962,8.077)
N1: (15.006,19.868,7.425)
O4: (14.337,21.632,3.885)
O2: (13.120,18.644,7.062)
C6: (15.854,20.859,7.002)
C5: (15.674,21.513,5.847)
O3': (15.720,17.270,10.818)
Image (generated by PyMOL):