Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2563:2576
Extra
PDB:
ATOM 1 O3' U A 562 -61.433 -2.975 35.096 1.00 88.80 O
ATOM 2 P G A 563 -60.926 -4.496 35.115 1.00 82.49 P
ATOM 3 OP1 G A 563 -59.453 -4.467 34.812 1.00 81.94 O
ATOM 4 OP2 G A 563 -61.823 -5.278 34.225 1.00 83.84 O
ATOM 5 O5' G A 563 -61.166 -4.918 36.626 1.00 81.84 O
ATOM 6 C5' G A 563 -60.523 -4.221 37.675 1.00 80.59 C
ATOM 7 C4' G A 563 -61.077 -4.615 39.000 1.00 80.24 C
ATOM 8 O4' G A 563 -62.517 -4.484 38.950 1.00 80.95 O
ATOM 9 C3' G A 563 -60.794 -6.051 39.400 1.00 80.47 C
ATOM 10 O3' G A 563 -60.733 -6.140 40.819 1.00 79.68 O
ATOM 11 C2' G A 563 -62.029 -6.781 38.911 1.00 81.69 C
ATOM 12 O2' G A 563 -62.284 -7.984 39.594 1.00 81.95 O
ATOM 13 C1' G A 563 -63.118 -5.746 39.174 1.00 81.65 C
ATOM 14 N9 G A 563 -64.283 -5.851 38.292 1.00 82.84 N
ATOM 15 C8 G A 563 -64.289 -5.949 36.926 1.00 83.71 C
ATOM 16 N7 G A 563 -65.491 -5.991 36.421 1.00 84.70 N
ATOM 17 C5 G A 563 -66.344 -5.901 37.518 1.00 84.46 C
ATOM 18 C6 G A 563 -67.773 -5.904 37.615 1.00 85.22 C
ATOM 19 O6 G A 563 -68.664 -5.975 36.743 1.00 86.32 O
ATOM 20 N1 G A 563 -68.169 -5.801 38.932 1.00 84.62 N
ATOM 21 C2 G A 563 -67.360 -5.711 40.022 1.00 83.47 C
ATOM 22 N2 G A 563 -67.991 -5.622 41.207 1.00 83.12 N
ATOM 23 N3 G A 563 -66.039 -5.718 39.951 1.00 82.77 N
ATOM 24 C4 G A 563 -65.600 -5.814 38.678 1.00 83.31 C
ATOM 25 P C A 564 -59.325 -6.246 41.567 1.00 84.46 P
ATOM 26 OP1 C A 564 -58.263 -6.168 40.528 1.00 84.50 O
ATOM 27 OP2 C A 564 -59.385 -7.439 42.441 1.00 84.54 O
ATOM 28 O5' C A 564 -59.298 -4.932 42.455 1.00 83.41 O
TER
ATOM 1 O3' G B 575 -66.283 -4.041 44.098 1.00 79.26 O
ATOM 2 P G B 576 -66.497 -5.553 44.624 1.00 98.92 P
ATOM 3 OP1 G B 576 -67.370 -6.238 43.645 1.00100.21 O
ATOM 4 OP2 G B 576 -66.944 -5.467 46.037 1.00 98.42 O
ATOM 5 O5' G B 576 -65.019 -6.159 44.564 1.00 98.40 O
ATOM 6 C5' G B 576 -64.285 -6.203 43.344 1.00 98.67 C
ATOM 7 C4' G B 576 -63.185 -7.244 43.385 1.00 98.52 C
ATOM 8 O4' G B 576 -62.340 -7.031 44.551 1.00 97.40 O
ATOM 9 C3' G B 576 -63.625 -8.696 43.532 1.00 99.32 C
ATOM 10 O3' G B 576 -64.081 -9.285 42.338 1.00100.47 O
ATOM 11 C2' G B 576 -62.378 -9.341 44.090 1.00 98.70 C
ATOM 12 O2' G B 576 -61.386 -9.445 43.088 1.00 98.78 O
ATOM 13 C1' G B 576 -61.948 -8.274 45.084 1.00 97.49 C
ATOM 14 N9 G B 576 -62.650 -8.460 46.348 1.00 97.30 N
ATOM 15 C8 G B 576 -64.025 -8.615 46.512 1.00 98.00 C
ATOM 16 N7 G B 576 -64.459 -8.811 47.709 1.00 97.74 N
ATOM 17 C5 G B 576 -63.251 -8.793 48.354 1.00 96.82 C
ATOM 18 C6 G B 576 -63.101 -8.952 49.700 1.00 96.22 C
ATOM 19 O6 G B 576 -64.060 -9.120 50.434 1.00 96.46 O
ATOM 20 N1 G B 576 -61.766 -8.878 50.084 1.00 95.36 N
ATOM 21 C2 G B 576 -60.712 -8.678 49.213 1.00 95.14 C
ATOM 22 N2 G B 576 -59.488 -8.644 49.775 1.00 94.32 N
ATOM 23 N3 G B 576 -60.840 -8.521 47.901 1.00 95.72 N
ATOM 24 C4 G B 576 -62.131 -8.587 47.573 1.00 96.53 C
ATOM 25 P U B 577 -64.863 -10.685 42.385 1.00 99.65 P
ATOM 26 OP1 U B 577 -65.361 -10.862 43.779 1.00 99.26 O
ATOM 27 OP2 U B 577 -63.956 -11.710 41.811 1.00 99.98 O
ATOM 28 O5' U B 577 -66.081 -10.430 41.399 1.00100.73 O
TER
ATOM 2 P G A 563 -60.926 -4.496 35.115 1.00 82.49 P
ATOM 3 OP1 G A 563 -59.453 -4.467 34.812 1.00 81.94 O
ATOM 4 OP2 G A 563 -61.823 -5.278 34.225 1.00 83.84 O
ATOM 5 O5' G A 563 -61.166 -4.918 36.626 1.00 81.84 O
ATOM 6 C5' G A 563 -60.523 -4.221 37.675 1.00 80.59 C
ATOM 7 C4' G A 563 -61.077 -4.615 39.000 1.00 80.24 C
ATOM 8 O4' G A 563 -62.517 -4.484 38.950 1.00 80.95 O
ATOM 9 C3' G A 563 -60.794 -6.051 39.400 1.00 80.47 C
ATOM 10 O3' G A 563 -60.733 -6.140 40.819 1.00 79.68 O
ATOM 11 C2' G A 563 -62.029 -6.781 38.911 1.00 81.69 C
ATOM 12 O2' G A 563 -62.284 -7.984 39.594 1.00 81.95 O
ATOM 13 C1' G A 563 -63.118 -5.746 39.174 1.00 81.65 C
ATOM 14 N9 G A 563 -64.283 -5.851 38.292 1.00 82.84 N
ATOM 15 C8 G A 563 -64.289 -5.949 36.926 1.00 83.71 C
ATOM 16 N7 G A 563 -65.491 -5.991 36.421 1.00 84.70 N
ATOM 17 C5 G A 563 -66.344 -5.901 37.518 1.00 84.46 C
ATOM 18 C6 G A 563 -67.773 -5.904 37.615 1.00 85.22 C
ATOM 19 O6 G A 563 -68.664 -5.975 36.743 1.00 86.32 O
ATOM 20 N1 G A 563 -68.169 -5.801 38.932 1.00 84.62 N
ATOM 21 C2 G A 563 -67.360 -5.711 40.022 1.00 83.47 C
ATOM 22 N2 G A 563 -67.991 -5.622 41.207 1.00 83.12 N
ATOM 23 N3 G A 563 -66.039 -5.718 39.951 1.00 82.77 N
ATOM 24 C4 G A 563 -65.600 -5.814 38.678 1.00 83.31 C
ATOM 25 P C A 564 -59.325 -6.246 41.567 1.00 84.46 P
ATOM 26 OP1 C A 564 -58.263 -6.168 40.528 1.00 84.50 O
ATOM 27 OP2 C A 564 -59.385 -7.439 42.441 1.00 84.54 O
ATOM 28 O5' C A 564 -59.298 -4.932 42.455 1.00 83.41 O
TER
ATOM 1 O3' G B 575 -66.283 -4.041 44.098 1.00 79.26 O
ATOM 2 P G B 576 -66.497 -5.553 44.624 1.00 98.92 P
ATOM 3 OP1 G B 576 -67.370 -6.238 43.645 1.00100.21 O
ATOM 4 OP2 G B 576 -66.944 -5.467 46.037 1.00 98.42 O
ATOM 5 O5' G B 576 -65.019 -6.159 44.564 1.00 98.40 O
ATOM 6 C5' G B 576 -64.285 -6.203 43.344 1.00 98.67 C
ATOM 7 C4' G B 576 -63.185 -7.244 43.385 1.00 98.52 C
ATOM 8 O4' G B 576 -62.340 -7.031 44.551 1.00 97.40 O
ATOM 9 C3' G B 576 -63.625 -8.696 43.532 1.00 99.32 C
ATOM 10 O3' G B 576 -64.081 -9.285 42.338 1.00100.47 O
ATOM 11 C2' G B 576 -62.378 -9.341 44.090 1.00 98.70 C
ATOM 12 O2' G B 576 -61.386 -9.445 43.088 1.00 98.78 O
ATOM 13 C1' G B 576 -61.948 -8.274 45.084 1.00 97.49 C
ATOM 14 N9 G B 576 -62.650 -8.460 46.348 1.00 97.30 N
ATOM 15 C8 G B 576 -64.025 -8.615 46.512 1.00 98.00 C
ATOM 16 N7 G B 576 -64.459 -8.811 47.709 1.00 97.74 N
ATOM 17 C5 G B 576 -63.251 -8.793 48.354 1.00 96.82 C
ATOM 18 C6 G B 576 -63.101 -8.952 49.700 1.00 96.22 C
ATOM 19 O6 G B 576 -64.060 -9.120 50.434 1.00 96.46 O
ATOM 20 N1 G B 576 -61.766 -8.878 50.084 1.00 95.36 N
ATOM 21 C2 G B 576 -60.712 -8.678 49.213 1.00 95.14 C
ATOM 22 N2 G B 576 -59.488 -8.644 49.775 1.00 94.32 N
ATOM 23 N3 G B 576 -60.840 -8.521 47.901 1.00 95.72 N
ATOM 24 C4 G B 576 -62.131 -8.587 47.573 1.00 96.53 C
ATOM 25 P U B 577 -64.863 -10.685 42.385 1.00 99.65 P
ATOM 26 OP1 U B 577 -65.361 -10.862 43.779 1.00 99.26 O
ATOM 27 OP2 U B 577 -63.956 -11.710 41.811 1.00 99.98 O
ATOM 28 O5' U B 577 -66.081 -10.430 41.399 1.00100.73 O
TER
Atoms:
OP1: (-59.453,-4.467,34.812)
OP2: (-61.823,-5.278,34.225)
C3': (-60.794,-6.051,39.400)
C1': (-63.118,-5.746,39.174)
C5': (-60.523,-4.221,37.675)
O6: (-68.664,-5.975,36.743)
O4': (-62.517,-4.484,38.950)
C8: (-64.289,-5.949,36.926)
C2: (-67.360,-5.711,40.022)
C6: (-67.773,-5.904,37.615)
C5: (-66.344,-5.901,37.518)
C4: (-65.600,-5.814,38.678)
P: (-60.926,-4.496,35.115)
C4': (-61.077,-4.615,39.000)
C2': (-62.029,-6.781,38.911)
O2': (-62.284,-7.984,39.594)
N1: (-68.169,-5.801,38.932)
N2: (-67.991,-5.622,41.207)
N3: (-66.039,-5.718,39.951)
N7: (-65.491,-5.991,36.421)
N9: (-64.283,-5.851,38.292)
O5': (-61.166,-4.918,36.626)
O3': (-60.733,-6.140,40.819)
OP2: (-61.823,-5.278,34.225)
C3': (-60.794,-6.051,39.400)
C1': (-63.118,-5.746,39.174)
C5': (-60.523,-4.221,37.675)
O6: (-68.664,-5.975,36.743)
O4': (-62.517,-4.484,38.950)
C8: (-64.289,-5.949,36.926)
C2: (-67.360,-5.711,40.022)
C6: (-67.773,-5.904,37.615)
C5: (-66.344,-5.901,37.518)
C4: (-65.600,-5.814,38.678)
P: (-60.926,-4.496,35.115)
C4': (-61.077,-4.615,39.000)
C2': (-62.029,-6.781,38.911)
O2': (-62.284,-7.984,39.594)
N1: (-68.169,-5.801,38.932)
N2: (-67.991,-5.622,41.207)
N3: (-66.039,-5.718,39.951)
N7: (-65.491,-5.991,36.421)
N9: (-64.283,-5.851,38.292)
O5': (-61.166,-4.918,36.626)
O3': (-60.733,-6.140,40.819)
OP1: (-67.370,-6.238,43.645)
OP2: (-66.944,-5.467,46.037)
C3': (-63.625,-8.696,43.532)
C1': (-61.948,-8.274,45.084)
C5': (-64.285,-6.203,43.344)
O6: (-64.060,-9.120,50.434)
O4': (-62.340,-7.031,44.551)
C8: (-64.025,-8.615,46.512)
C2: (-60.712,-8.678,49.213)
C6: (-63.101,-8.952,49.700)
C5: (-63.251,-8.793,48.354)
C4: (-62.131,-8.587,47.573)
P: (-66.497,-5.553,44.624)
C4': (-63.185,-7.244,43.385)
C2': (-62.378,-9.341,44.090)
O2': (-61.386,-9.445,43.088)
N1: (-61.766,-8.878,50.084)
N2: (-59.488,-8.644,49.775)
N3: (-60.840,-8.521,47.901)
N7: (-64.459,-8.811,47.709)
N9: (-62.650,-8.460,46.348)
O5': (-65.019,-6.159,44.564)
O3': (-64.081,-9.285,42.338)
OP2: (-66.944,-5.467,46.037)
C3': (-63.625,-8.696,43.532)
C1': (-61.948,-8.274,45.084)
C5': (-64.285,-6.203,43.344)
O6: (-64.060,-9.120,50.434)
O4': (-62.340,-7.031,44.551)
C8: (-64.025,-8.615,46.512)
C2: (-60.712,-8.678,49.213)
C6: (-63.101,-8.952,49.700)
C5: (-63.251,-8.793,48.354)
C4: (-62.131,-8.587,47.573)
P: (-66.497,-5.553,44.624)
C4': (-63.185,-7.244,43.385)
C2': (-62.378,-9.341,44.090)
O2': (-61.386,-9.445,43.088)
N1: (-61.766,-8.878,50.084)
N2: (-59.488,-8.644,49.775)
N3: (-60.840,-8.521,47.901)
N7: (-64.459,-8.811,47.709)
N9: (-62.650,-8.460,46.348)
O5': (-65.019,-6.159,44.564)
O3': (-64.081,-9.285,42.338)
Image (generated by PyMOL):