Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1QBP:F7:F6
Extra
PDB:
ATOM 1 O3' U A 6 4.238 5.049 -2.472 1.00 63.03 O
ATOM 2 P U A 7 4.070 4.335 -3.904 1.00 66.67 P
ATOM 3 OP1 U A 7 4.364 2.879 -3.745 1.00 66.99 O
ATOM 4 OP2 U A 7 4.813 5.135 -4.924 1.00 66.55 O
ATOM 5 O5' U A 7 2.519 4.487 -4.190 1.00 64.98 O
ATOM 6 C5' U A 7 2.039 5.645 -4.838 1.00 62.56 C
ATOM 7 C4' U A 7 1.148 6.434 -3.914 1.00 60.76 C
ATOM 8 O4' U A 7 1.882 6.841 -2.729 1.00 58.65 O
ATOM 9 C3' U A 7 0.735 7.749 -4.542 1.00 60.37 C
ATOM 10 O3' U A 7 -0.311 7.594 -5.461 1.00 58.40 O
ATOM 11 C2' U A 7 0.417 8.599 -3.330 1.00 58.47 C
ATOM 12 O2' U A 7 -0.805 8.191 -2.731 1.00 61.52 O
ATOM 13 C1' U A 7 1.566 8.189 -2.415 1.00 54.94 C
ATOM 14 N1 U A 7 2.765 9.007 -2.647 1.00 46.33 N
ATOM 15 C2 U A 7 2.609 10.368 -2.793 1.00 40.01 C
ATOM 16 O2 U A 7 1.528 10.917 -2.766 1.00 39.80 O
ATOM 17 N3 U A 7 3.770 11.063 -2.987 1.00 35.75 N
ATOM 18 C4 U A 7 5.033 10.542 -3.063 1.00 35.84 C
ATOM 19 O4 U A 7 5.979 11.293 -3.240 1.00 36.69 O
ATOM 20 C5 U A 7 5.112 9.127 -2.915 1.00 38.39 C
ATOM 21 C6 U A 7 4.006 8.426 -2.715 1.00 40.97 C
ATOM 22 P C A 8 0.052 7.401 -7.002 1.00 56.66 P
ATOM 23 OP1 C A 8 -1.060 6.655 -7.622 1.00 58.35 O
ATOM 24 OP2 C A 8 1.425 6.867 -7.097 1.00 54.72 O
ATOM 25 O5' C A 8 0.051 8.892 -7.546 1.00 57.37 O
TER
ATOM 1 O3' G B 5 9.420 1.139 -0.549 1.00 55.16 O
ATOM 2 P U B 6 8.730 1.425 -1.970 1.00 57.30 P
ATOM 3 OP1 U B 6 8.501 0.099 -2.589 1.00 58.18 O
ATOM 4 OP2 U B 6 9.514 2.453 -2.713 1.00 55.57 O
ATOM 5 O5' U B 6 7.316 2.010 -1.543 1.00 55.78 O
ATOM 6 C5' U B 6 6.720 3.081 -2.254 1.00 54.02 C
ATOM 7 C4' U B 6 6.100 4.050 -1.283 1.00 53.45 C
ATOM 8 O4' U B 6 7.125 4.577 -0.404 1.00 51.30 O
ATOM 9 C3' U B 6 5.529 5.281 -1.956 1.00 56.02 C
ATOM 10 O3' U B 6 4.238 5.049 -2.472 1.00 63.03 O
ATOM 11 C2' U B 6 5.568 6.308 -0.839 1.00 52.32 C
ATOM 12 O2' U B 6 4.517 6.082 0.087 1.00 56.52 O
ATOM 13 C1' U B 6 6.885 5.944 -0.156 1.00 46.88 C
ATOM 14 N1 U B 6 8.005 6.725 -0.693 1.00 35.11 N
ATOM 15 C2 U B 6 7.896 8.086 -0.644 1.00 31.70 C
ATOM 16 O2 U B 6 6.929 8.653 -0.179 1.00 32.30 O
ATOM 17 N3 U B 6 8.953 8.774 -1.161 1.00 33.05 N
ATOM 18 C4 U B 6 10.099 8.249 -1.707 1.00 36.64 C
ATOM 19 O4 U B 6 10.984 9.017 -2.114 1.00 35.72 O
ATOM 20 C5 U B 6 10.141 6.815 -1.724 1.00 33.40 C
ATOM 21 C6 U B 6 9.110 6.124 -1.228 1.00 33.17 C
ATOM 22 P U B 7 4.070 4.335 -3.904 1.00 66.67 P
ATOM 23 OP1 U B 7 4.364 2.879 -3.745 1.00 66.99 O
ATOM 24 OP2 U B 7 4.813 5.135 -4.924 1.00 66.55 O
ATOM 25 O5' U B 7 2.519 4.487 -4.190 1.00 64.98 O
TER
ATOM 2 P U A 7 4.070 4.335 -3.904 1.00 66.67 P
ATOM 3 OP1 U A 7 4.364 2.879 -3.745 1.00 66.99 O
ATOM 4 OP2 U A 7 4.813 5.135 -4.924 1.00 66.55 O
ATOM 5 O5' U A 7 2.519 4.487 -4.190 1.00 64.98 O
ATOM 6 C5' U A 7 2.039 5.645 -4.838 1.00 62.56 C
ATOM 7 C4' U A 7 1.148 6.434 -3.914 1.00 60.76 C
ATOM 8 O4' U A 7 1.882 6.841 -2.729 1.00 58.65 O
ATOM 9 C3' U A 7 0.735 7.749 -4.542 1.00 60.37 C
ATOM 10 O3' U A 7 -0.311 7.594 -5.461 1.00 58.40 O
ATOM 11 C2' U A 7 0.417 8.599 -3.330 1.00 58.47 C
ATOM 12 O2' U A 7 -0.805 8.191 -2.731 1.00 61.52 O
ATOM 13 C1' U A 7 1.566 8.189 -2.415 1.00 54.94 C
ATOM 14 N1 U A 7 2.765 9.007 -2.647 1.00 46.33 N
ATOM 15 C2 U A 7 2.609 10.368 -2.793 1.00 40.01 C
ATOM 16 O2 U A 7 1.528 10.917 -2.766 1.00 39.80 O
ATOM 17 N3 U A 7 3.770 11.063 -2.987 1.00 35.75 N
ATOM 18 C4 U A 7 5.033 10.542 -3.063 1.00 35.84 C
ATOM 19 O4 U A 7 5.979 11.293 -3.240 1.00 36.69 O
ATOM 20 C5 U A 7 5.112 9.127 -2.915 1.00 38.39 C
ATOM 21 C6 U A 7 4.006 8.426 -2.715 1.00 40.97 C
ATOM 22 P C A 8 0.052 7.401 -7.002 1.00 56.66 P
ATOM 23 OP1 C A 8 -1.060 6.655 -7.622 1.00 58.35 O
ATOM 24 OP2 C A 8 1.425 6.867 -7.097 1.00 54.72 O
ATOM 25 O5' C A 8 0.051 8.892 -7.546 1.00 57.37 O
TER
ATOM 1 O3' G B 5 9.420 1.139 -0.549 1.00 55.16 O
ATOM 2 P U B 6 8.730 1.425 -1.970 1.00 57.30 P
ATOM 3 OP1 U B 6 8.501 0.099 -2.589 1.00 58.18 O
ATOM 4 OP2 U B 6 9.514 2.453 -2.713 1.00 55.57 O
ATOM 5 O5' U B 6 7.316 2.010 -1.543 1.00 55.78 O
ATOM 6 C5' U B 6 6.720 3.081 -2.254 1.00 54.02 C
ATOM 7 C4' U B 6 6.100 4.050 -1.283 1.00 53.45 C
ATOM 8 O4' U B 6 7.125 4.577 -0.404 1.00 51.30 O
ATOM 9 C3' U B 6 5.529 5.281 -1.956 1.00 56.02 C
ATOM 10 O3' U B 6 4.238 5.049 -2.472 1.00 63.03 O
ATOM 11 C2' U B 6 5.568 6.308 -0.839 1.00 52.32 C
ATOM 12 O2' U B 6 4.517 6.082 0.087 1.00 56.52 O
ATOM 13 C1' U B 6 6.885 5.944 -0.156 1.00 46.88 C
ATOM 14 N1 U B 6 8.005 6.725 -0.693 1.00 35.11 N
ATOM 15 C2 U B 6 7.896 8.086 -0.644 1.00 31.70 C
ATOM 16 O2 U B 6 6.929 8.653 -0.179 1.00 32.30 O
ATOM 17 N3 U B 6 8.953 8.774 -1.161 1.00 33.05 N
ATOM 18 C4 U B 6 10.099 8.249 -1.707 1.00 36.64 C
ATOM 19 O4 U B 6 10.984 9.017 -2.114 1.00 35.72 O
ATOM 20 C5 U B 6 10.141 6.815 -1.724 1.00 33.40 C
ATOM 21 C6 U B 6 9.110 6.124 -1.228 1.00 33.17 C
ATOM 22 P U B 7 4.070 4.335 -3.904 1.00 66.67 P
ATOM 23 OP1 U B 7 4.364 2.879 -3.745 1.00 66.99 O
ATOM 24 OP2 U B 7 4.813 5.135 -4.924 1.00 66.55 O
ATOM 25 O5' U B 7 2.519 4.487 -4.190 1.00 64.98 O
TER
Atoms:
C4: (5.033,10.542,-3.063)
N3: (3.770,11.063,-2.987)
OP1: (4.364,2.879,-3.745)
OP2: (4.813,5.135,-4.924)
C2: (2.609,10.368,-2.793)
C1': (1.566,8.189,-2.415)
C3': (0.735,7.749,-4.542)
O5': (2.519,4.487,-4.190)
O4': (1.882,6.841,-2.729)
C5': (2.039,5.645,-4.838)
P: (4.070,4.335,-3.904)
C4': (1.148,6.434,-3.914)
C2': (0.417,8.599,-3.330)
O2': (-0.805,8.191,-2.731)
N1: (2.765,9.007,-2.647)
O4: (5.979,11.293,-3.240)
O2: (1.528,10.917,-2.766)
C6: (4.006,8.426,-2.715)
C5: (5.112,9.127,-2.915)
O3': (-0.311,7.594,-5.461)
N3: (3.770,11.063,-2.987)
OP1: (4.364,2.879,-3.745)
OP2: (4.813,5.135,-4.924)
C2: (2.609,10.368,-2.793)
C1': (1.566,8.189,-2.415)
C3': (0.735,7.749,-4.542)
O5': (2.519,4.487,-4.190)
O4': (1.882,6.841,-2.729)
C5': (2.039,5.645,-4.838)
P: (4.070,4.335,-3.904)
C4': (1.148,6.434,-3.914)
C2': (0.417,8.599,-3.330)
O2': (-0.805,8.191,-2.731)
N1: (2.765,9.007,-2.647)
O4: (5.979,11.293,-3.240)
O2: (1.528,10.917,-2.766)
C6: (4.006,8.426,-2.715)
C5: (5.112,9.127,-2.915)
O3': (-0.311,7.594,-5.461)
C4: (10.099,8.249,-1.707)
N3: (8.953,8.774,-1.161)
OP1: (8.501,0.099,-2.589)
OP2: (9.514,2.453,-2.713)
C2: (7.896,8.086,-0.644)
C1': (6.885,5.944,-0.156)
C3': (5.529,5.281,-1.956)
O5': (7.316,2.010,-1.543)
O4': (7.125,4.577,-0.404)
C5': (6.720,3.081,-2.254)
P: (8.730,1.425,-1.970)
C4': (6.100,4.050,-1.283)
C2': (5.568,6.308,-0.839)
O2': (4.517,6.082,0.087)
N1: (8.005,6.725,-0.693)
O4: (10.984,9.017,-2.114)
O2: (6.929,8.653,-0.179)
C6: (9.110,6.124,-1.228)
C5: (10.141,6.815,-1.724)
O3': (4.238,5.049,-2.472)
N3: (8.953,8.774,-1.161)
OP1: (8.501,0.099,-2.589)
OP2: (9.514,2.453,-2.713)
C2: (7.896,8.086,-0.644)
C1': (6.885,5.944,-0.156)
C3': (5.529,5.281,-1.956)
O5': (7.316,2.010,-1.543)
O4': (7.125,4.577,-0.404)
C5': (6.720,3.081,-2.254)
P: (8.730,1.425,-1.970)
C4': (6.100,4.050,-1.283)
C2': (5.568,6.308,-0.839)
O2': (4.517,6.082,0.087)
N1: (8.005,6.725,-0.693)
O4: (10.984,9.017,-2.114)
O2: (6.929,8.653,-0.179)
C6: (9.110,6.124,-1.228)
C5: (10.141,6.815,-1.724)
O3': (4.238,5.049,-2.472)
Image (generated by PyMOL):