ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:B21:B25

Extra

PDB:
ATOM 1 O3' G A 20 58.427 8.441 112.940 1.00 96.39 O
ATOM 2 P G A 21 59.617 7.371 112.843 1.00 98.12 P
ATOM 3 OP1 G A 21 59.507 6.504 114.047 1.00 99.09 O
ATOM 4 OP2 G A 21 60.895 8.097 112.569 1.00 96.81 O
ATOM 5 O5' G A 21 59.211 6.509 111.567 1.00 99.82 O
ATOM 6 C5' G A 21 60.193 5.810 110.810 1.00102.90 C
ATOM 7 C4' G A 21 60.069 6.168 109.351 1.00105.27 C
ATOM 8 O4' G A 21 59.816 7.587 109.225 1.00103.84 O
ATOM 9 C3' G A 21 61.339 5.915 108.558 1.00107.76 C
ATOM 10 O3' G A 21 61.352 4.565 108.097 1.00115.42 O
ATOM 11 C2' G A 21 61.246 6.939 107.433 1.00105.35 C
ATOM 12 O2' G A 21 60.404 6.518 106.382 1.00105.07 O
ATOM 13 C1' G A 21 60.580 8.114 108.153 1.00103.30 C
ATOM 14 N9 G A 21 61.490 9.114 108.709 1.00100.63 N
ATOM 15 C8 G A 21 62.205 9.024 109.881 1.00100.41 C
ATOM 16 N7 G A 21 62.883 10.109 110.154 1.00 99.61 N
ATOM 17 C5 G A 21 62.604 10.969 109.098 1.00 97.92 C
ATOM 18 C6 G A 21 63.029 12.307 108.861 1.00 95.73 C
ATOM 19 O6 G A 21 63.750 13.030 109.565 1.00 93.96 O
ATOM 20 N1 G A 21 62.516 12.797 107.667 1.00 94.14 N
ATOM 21 C2 G A 21 61.691 12.104 106.815 1.00 94.07 C
ATOM 22 N2 G A 21 61.305 12.748 105.711 1.00 92.63 N
ATOM 23 N3 G A 21 61.275 10.870 107.029 1.00 95.81 N
ATOM 24 C4 G A 21 61.766 10.364 108.183 1.00 98.52 C
ATOM 25 P U A 22 62.412 3.516 108.700 1.00120.90 P
ATOM 26 OP1 U A 22 62.395 3.650 110.182 1.00120.70 O
ATOM 27 OP2 U A 22 63.689 3.656 107.964 1.00120.46 O
ATOM 28 O5' U A 22 61.793 2.091 108.338 1.00125.14 O
TER

ATOM 1 O3' G B 24 59.466 6.103 97.788 1.00114.39 O
ATOM 2 P C B 25 60.802 6.729 97.123 1.00107.24 P
ATOM 3 OP1 C B 25 60.794 6.470 95.659 1.00106.57 O
ATOM 4 OP2 C B 25 61.932 6.238 97.949 1.00106.85 O
ATOM 5 O5' C B 25 60.707 8.302 97.356 1.00102.69 O
ATOM 6 C5' C B 25 59.762 9.105 96.626 1.00 94.47 C
ATOM 7 C4' C B 25 59.500 10.404 97.353 1.00 89.41 C
ATOM 8 O4' C B 25 58.948 10.149 98.674 1.00 88.43 O
ATOM 9 C3' C B 25 60.725 11.234 97.665 1.00 87.07 C
ATOM 10 O3' C B 25 61.190 11.920 96.519 1.00 82.86 O
ATOM 11 C2' C B 25 60.202 12.168 98.745 1.00 87.41 C
ATOM 12 O2' C B 25 59.433 13.224 98.216 1.00 87.45 O
ATOM 13 C1' C B 25 59.294 11.224 99.540 1.00 88.21 C
ATOM 14 N1 C B 25 59.925 10.693 100.772 1.00 88.76 N
ATOM 15 C2 C B 25 60.056 11.555 101.881 1.00 89.01 C
ATOM 16 O2 C B 25 59.653 12.734 101.782 1.00 88.16 O
ATOM 17 N3 C B 25 60.616 11.084 103.026 1.00 89.12 N
ATOM 18 C4 C B 25 61.034 9.818 103.093 1.00 88.78 C
ATOM 19 N4 C B 25 61.547 9.392 104.251 1.00 89.09 N
ATOM 20 C5 C B 25 60.933 8.928 101.978 1.00 88.43 C
ATOM 21 C6 C B 25 60.376 9.401 100.851 1.00 88.10 C
ATOM 22 P C B 26 62.764 12.142 96.317 1.00 78.39 P
ATOM 23 OP1 C B 26 62.943 12.660 94.942 1.00 79.03 O
ATOM 24 OP2 C B 26 63.504 10.937 96.744 1.00 78.04 O
ATOM 25 O5' C B 26 63.086 13.295 97.359 1.00 77.76 O
TER

Atoms:
OP1: (59.507,6.504,114.047)
OP2: (60.895,8.097,112.569)
C3': (61.339,5.915,108.558)
C1': (60.580,8.114,108.153)
C5': (60.193,5.810,110.810)
O6: (63.750,13.030,109.565)
O4': (59.816,7.587,109.225)
C8: (62.205,9.024,109.881)
C2: (61.691,12.104,106.815)
C6: (63.029,12.307,108.861)
C5: (62.604,10.969,109.098)
C4: (61.766,10.364,108.183)
P: (59.617,7.371,112.843)
C4': (60.069,6.168,109.351)
C2': (61.246,6.939,107.433)
O2': (60.404,6.518,106.382)
N1: (62.516,12.797,107.667)
N2: (61.305,12.748,105.711)
N3: (61.275,10.870,107.029)
N7: (62.883,10.109,110.154)
N9: (61.490,9.114,108.709)
O5': (59.211,6.509,111.567)
O3': (61.352,4.565,108.097)
C2: (60.056,11.555,101.881)
OP1: (60.794,6.470,95.659)
OP2: (61.932,6.238,97.949)
C4: (61.034,9.818,103.093)
O5': (60.707,8.302,97.356)
C3': (60.725,11.234,97.665)
C1': (59.294,11.224,99.540)
O4': (58.948,10.149,98.674)
C5': (59.762,9.105,96.626)
P: (60.802,6.729,97.123)
O2: (59.653,12.734,101.782)
C4': (59.500,10.404,97.353)
C2': (60.202,12.168,98.745)
O2': (59.433,13.224,98.216)
N1: (59.925,10.693,100.772)
N3: (60.616,11.084,103.026)
N4: (61.547,9.392,104.251)
C6: (60.376,9.401,100.851)
C5: (60.933,8.928,101.978)
O3': (61.190,11.920,96.519)
Image (generated by PyMOL):
PyMOL image
show in jmol