Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01729:01728
Extra
PDB:
ATOM 1 O3' U A1728 119.940 141.667 102.528 1.00 42.12 O
ATOM 2 P U A1729 121.438 141.656 101.953 1.00 44.16 P
ATOM 3 OP1 U A1729 121.747 140.267 101.524 1.00 43.33 O
ATOM 4 OP2 U A1729 122.328 142.337 102.926 1.00 46.27 O
ATOM 5 O5' U A1729 121.359 142.560 100.647 1.00 45.25 O
ATOM 6 C5' U A1729 122.372 142.464 99.637 1.00 47.05 C
ATOM 7 C4' U A1729 121.824 142.880 98.294 1.00 48.83 C
ATOM 8 O4' U A1729 120.838 141.914 97.836 1.00 48.19 O
ATOM 9 C3' U A1729 121.149 144.248 98.227 1.00 50.12 C
ATOM 10 O3' U A1729 121.448 144.833 96.965 1.00 51.65 O
ATOM 11 C2' U A1729 119.666 143.891 98.313 1.00 49.39 C
ATOM 12 O2' U A1729 118.806 144.836 97.710 1.00 48.56 O
ATOM 13 C1' U A1729 119.627 142.581 97.530 1.00 48.04 C
ATOM 14 N1 U A1729 118.508 141.697 97.889 1.00 46.35 N
ATOM 15 C2 U A1729 117.707 141.217 96.866 1.00 44.79 C
ATOM 16 O2 U A1729 117.857 141.534 95.698 1.00 42.93 O
ATOM 17 N3 U A1729 116.717 140.352 97.267 1.00 44.62 N
ATOM 18 C4 U A1729 116.445 139.937 98.556 1.00 45.26 C
ATOM 19 O4 U A1729 115.589 139.073 98.749 1.00 45.40 O
ATOM 20 C5 U A1729 117.290 140.508 99.555 1.00 46.53 C
ATOM 21 C6 U A1729 118.270 141.342 99.199 1.00 46.62 C
ATOM 22 P C A1730 122.840 145.605 96.764 1.00 51.13 P
ATOM 23 OP1 C A1730 122.922 146.045 95.347 1.00 50.28 O
ATOM 24 OP2 C A1730 123.893 144.711 97.314 1.00 49.63 O
ATOM 25 O5' C A1730 122.713 146.887 97.707 1.00 48.69 O
TER
ATOM 1 O3' C B1727 118.035 141.025 108.289 1.00 45.45 O
ATOM 2 P U B1728 119.385 140.881 107.434 1.00 49.19 P
ATOM 3 OP1 U B1728 119.521 139.468 106.982 1.00 47.86 O
ATOM 4 OP2 U B1728 120.479 141.507 108.225 1.00 51.19 O
ATOM 5 O5' U B1728 119.134 141.793 106.154 1.00 47.25 O
ATOM 6 C5' U B1728 118.170 141.408 105.164 1.00 46.72 C
ATOM 7 C4' U B1728 118.176 142.383 104.019 1.00 45.47 C
ATOM 8 O4' U B1728 117.690 143.677 104.462 1.00 47.02 O
ATOM 9 C3' U B1728 119.537 142.683 103.424 1.00 43.83 C
ATOM 10 O3' U B1728 119.940 141.667 102.528 1.00 42.12 O
ATOM 11 C2' U B1728 119.297 144.020 102.741 1.00 45.68 C
ATOM 12 O2' U B1728 118.651 143.889 101.491 1.00 43.97 O
ATOM 13 C1' U B1728 118.368 144.704 103.750 1.00 47.93 C
ATOM 14 N1 U B1728 119.104 145.528 104.720 1.00 50.58 N
ATOM 15 C2 U B1728 119.448 146.821 104.352 1.00 51.50 C
ATOM 16 O2 U B1728 119.151 147.307 103.272 1.00 50.65 O
ATOM 17 N3 U B1728 120.152 147.524 105.300 1.00 52.75 N
ATOM 18 C4 U B1728 120.529 147.083 106.556 1.00 54.23 C
ATOM 19 O4 U B1728 121.121 147.850 107.315 1.00 56.10 O
ATOM 20 C5 U B1728 120.132 145.744 106.865 1.00 54.32 C
ATOM 21 C6 U B1728 119.452 145.030 105.961 1.00 52.87 C
ATOM 22 P U B1729 121.438 141.656 101.953 1.00 44.16 P
ATOM 23 OP1 U B1729 121.747 140.267 101.524 1.00 43.33 O
ATOM 24 OP2 U B1729 122.328 142.337 102.926 1.00 46.27 O
ATOM 25 O5' U B1729 121.359 142.560 100.647 1.00 45.25 O
TER
ATOM 2 P U A1729 121.438 141.656 101.953 1.00 44.16 P
ATOM 3 OP1 U A1729 121.747 140.267 101.524 1.00 43.33 O
ATOM 4 OP2 U A1729 122.328 142.337 102.926 1.00 46.27 O
ATOM 5 O5' U A1729 121.359 142.560 100.647 1.00 45.25 O
ATOM 6 C5' U A1729 122.372 142.464 99.637 1.00 47.05 C
ATOM 7 C4' U A1729 121.824 142.880 98.294 1.00 48.83 C
ATOM 8 O4' U A1729 120.838 141.914 97.836 1.00 48.19 O
ATOM 9 C3' U A1729 121.149 144.248 98.227 1.00 50.12 C
ATOM 10 O3' U A1729 121.448 144.833 96.965 1.00 51.65 O
ATOM 11 C2' U A1729 119.666 143.891 98.313 1.00 49.39 C
ATOM 12 O2' U A1729 118.806 144.836 97.710 1.00 48.56 O
ATOM 13 C1' U A1729 119.627 142.581 97.530 1.00 48.04 C
ATOM 14 N1 U A1729 118.508 141.697 97.889 1.00 46.35 N
ATOM 15 C2 U A1729 117.707 141.217 96.866 1.00 44.79 C
ATOM 16 O2 U A1729 117.857 141.534 95.698 1.00 42.93 O
ATOM 17 N3 U A1729 116.717 140.352 97.267 1.00 44.62 N
ATOM 18 C4 U A1729 116.445 139.937 98.556 1.00 45.26 C
ATOM 19 O4 U A1729 115.589 139.073 98.749 1.00 45.40 O
ATOM 20 C5 U A1729 117.290 140.508 99.555 1.00 46.53 C
ATOM 21 C6 U A1729 118.270 141.342 99.199 1.00 46.62 C
ATOM 22 P C A1730 122.840 145.605 96.764 1.00 51.13 P
ATOM 23 OP1 C A1730 122.922 146.045 95.347 1.00 50.28 O
ATOM 24 OP2 C A1730 123.893 144.711 97.314 1.00 49.63 O
ATOM 25 O5' C A1730 122.713 146.887 97.707 1.00 48.69 O
TER
ATOM 1 O3' C B1727 118.035 141.025 108.289 1.00 45.45 O
ATOM 2 P U B1728 119.385 140.881 107.434 1.00 49.19 P
ATOM 3 OP1 U B1728 119.521 139.468 106.982 1.00 47.86 O
ATOM 4 OP2 U B1728 120.479 141.507 108.225 1.00 51.19 O
ATOM 5 O5' U B1728 119.134 141.793 106.154 1.00 47.25 O
ATOM 6 C5' U B1728 118.170 141.408 105.164 1.00 46.72 C
ATOM 7 C4' U B1728 118.176 142.383 104.019 1.00 45.47 C
ATOM 8 O4' U B1728 117.690 143.677 104.462 1.00 47.02 O
ATOM 9 C3' U B1728 119.537 142.683 103.424 1.00 43.83 C
ATOM 10 O3' U B1728 119.940 141.667 102.528 1.00 42.12 O
ATOM 11 C2' U B1728 119.297 144.020 102.741 1.00 45.68 C
ATOM 12 O2' U B1728 118.651 143.889 101.491 1.00 43.97 O
ATOM 13 C1' U B1728 118.368 144.704 103.750 1.00 47.93 C
ATOM 14 N1 U B1728 119.104 145.528 104.720 1.00 50.58 N
ATOM 15 C2 U B1728 119.448 146.821 104.352 1.00 51.50 C
ATOM 16 O2 U B1728 119.151 147.307 103.272 1.00 50.65 O
ATOM 17 N3 U B1728 120.152 147.524 105.300 1.00 52.75 N
ATOM 18 C4 U B1728 120.529 147.083 106.556 1.00 54.23 C
ATOM 19 O4 U B1728 121.121 147.850 107.315 1.00 56.10 O
ATOM 20 C5 U B1728 120.132 145.744 106.865 1.00 54.32 C
ATOM 21 C6 U B1728 119.452 145.030 105.961 1.00 52.87 C
ATOM 22 P U B1729 121.438 141.656 101.953 1.00 44.16 P
ATOM 23 OP1 U B1729 121.747 140.267 101.524 1.00 43.33 O
ATOM 24 OP2 U B1729 122.328 142.337 102.926 1.00 46.27 O
ATOM 25 O5' U B1729 121.359 142.560 100.647 1.00 45.25 O
TER
Atoms:
C4: (116.445,139.937,98.556)
N3: (116.717,140.352,97.267)
OP1: (121.747,140.267,101.524)
OP2: (122.328,142.337,102.926)
C2: (117.707,141.217,96.866)
C1': (119.627,142.581,97.530)
C3': (121.149,144.248,98.227)
O5': (121.359,142.560,100.647)
O4': (120.838,141.914,97.836)
C5': (122.372,142.464,99.637)
P: (121.438,141.656,101.953)
C4': (121.824,142.880,98.294)
C2': (119.666,143.891,98.313)
O2': (118.806,144.836,97.710)
N1: (118.508,141.697,97.889)
O4: (115.589,139.073,98.749)
O2: (117.857,141.534,95.698)
C6: (118.270,141.342,99.199)
C5: (117.290,140.508,99.555)
O3': (121.448,144.833,96.965)
N3: (116.717,140.352,97.267)
OP1: (121.747,140.267,101.524)
OP2: (122.328,142.337,102.926)
C2: (117.707,141.217,96.866)
C1': (119.627,142.581,97.530)
C3': (121.149,144.248,98.227)
O5': (121.359,142.560,100.647)
O4': (120.838,141.914,97.836)
C5': (122.372,142.464,99.637)
P: (121.438,141.656,101.953)
C4': (121.824,142.880,98.294)
C2': (119.666,143.891,98.313)
O2': (118.806,144.836,97.710)
N1: (118.508,141.697,97.889)
O4: (115.589,139.073,98.749)
O2: (117.857,141.534,95.698)
C6: (118.270,141.342,99.199)
C5: (117.290,140.508,99.555)
O3': (121.448,144.833,96.965)
C4: (120.529,147.083,106.556)
N3: (120.152,147.524,105.300)
OP1: (119.521,139.468,106.982)
OP2: (120.479,141.507,108.225)
C2: (119.448,146.821,104.352)
C1': (118.368,144.704,103.750)
C3': (119.537,142.683,103.424)
O5': (119.134,141.793,106.154)
O4': (117.690,143.677,104.462)
C5': (118.170,141.408,105.164)
P: (119.385,140.881,107.434)
C4': (118.176,142.383,104.019)
C2': (119.297,144.020,102.741)
O2': (118.651,143.889,101.491)
N1: (119.104,145.528,104.720)
O4: (121.121,147.850,107.315)
O2: (119.151,147.307,103.272)
C6: (119.452,145.030,105.961)
C5: (120.132,145.744,106.865)
O3': (119.940,141.667,102.528)
N3: (120.152,147.524,105.300)
OP1: (119.521,139.468,106.982)
OP2: (120.479,141.507,108.225)
C2: (119.448,146.821,104.352)
C1': (118.368,144.704,103.750)
C3': (119.537,142.683,103.424)
O5': (119.134,141.793,106.154)
O4': (117.690,143.677,104.462)
C5': (118.170,141.408,105.164)
P: (119.385,140.881,107.434)
C4': (118.176,142.383,104.019)
C2': (119.297,144.020,102.741)
O2': (118.651,143.889,101.491)
N1: (119.104,145.528,104.720)
O4: (121.121,147.850,107.315)
O2: (119.151,147.307,103.272)
C6: (119.452,145.030,105.961)
C5: (120.132,145.744,106.865)
O3': (119.940,141.667,102.528)
Image (generated by PyMOL):