Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01729:01728
Extra
PDB:
ATOM 1 O3' U A1728 120.295 141.849 102.973 1.00 52.98 O
ATOM 2 P U A1729 121.780 141.853 102.364 1.00 53.84 P
ATOM 3 OP1 U A1729 122.112 140.468 101.933 1.00 51.94 O
ATOM 4 OP2 U A1729 122.673 142.559 103.311 1.00 55.99 O
ATOM 5 O5' U A1729 121.668 142.746 101.056 1.00 52.06 O
ATOM 6 C5' U A1729 122.723 142.737 100.100 1.00 53.72 C
ATOM 7 C4' U A1729 122.213 143.165 98.752 1.00 56.52 C
ATOM 8 O4' U A1729 121.229 142.207 98.272 1.00 57.05 O
ATOM 9 C3' U A1729 121.553 144.537 98.686 1.00 57.88 C
ATOM 10 O3' U A1729 121.908 145.140 97.449 1.00 59.19 O
ATOM 11 C2' U A1729 120.062 144.196 98.713 1.00 57.48 C
ATOM 12 O2' U A1729 119.256 145.146 98.050 1.00 57.06 O
ATOM 13 C1' U A1729 120.031 142.881 97.939 1.00 56.23 C
ATOM 14 N1 U A1729 118.901 142.004 98.285 1.00 55.21 N
ATOM 15 C2 U A1729 118.098 141.546 97.254 1.00 54.51 C
ATOM 16 O2 U A1729 118.254 141.880 96.085 1.00 53.69 O
ATOM 17 N3 U A1729 117.100 140.680 97.643 1.00 52.96 N
ATOM 18 C4 U A1729 116.825 140.242 98.924 1.00 52.54 C
ATOM 19 O4 U A1729 115.988 139.355 99.097 1.00 49.60 O
ATOM 20 C5 U A1729 117.672 140.794 99.931 1.00 54.01 C
ATOM 21 C6 U A1729 118.656 141.632 99.588 1.00 54.95 C
ATOM 22 P C A1730 123.333 145.859 97.303 1.00 58.22 P
ATOM 23 OP1 C A1730 123.451 146.297 95.896 1.00 57.34 O
ATOM 24 OP2 C A1730 124.334 144.929 97.866 1.00 58.70 O
ATOM 25 O5' C A1730 123.234 147.143 98.246 1.00 57.77 O
TER
ATOM 1 O3' C B1727 118.401 141.188 108.725 1.00 58.49 O
ATOM 2 P U B1728 119.731 141.062 107.842 1.00 58.39 P
ATOM 3 OP1 U B1728 119.881 139.658 107.367 1.00 57.45 O
ATOM 4 OP2 U B1728 120.822 141.700 108.636 1.00 59.70 O
ATOM 5 O5' U B1728 119.455 141.989 106.581 1.00 56.49 O
ATOM 6 C5' U B1728 118.509 141.599 105.589 1.00 56.02 C
ATOM 7 C4' U B1728 118.533 142.572 104.449 1.00 54.52 C
ATOM 8 O4' U B1728 118.059 143.868 104.896 1.00 54.41 O
ATOM 9 C3' U B1728 119.905 142.859 103.880 1.00 52.64 C
ATOM 10 O3' U B1728 120.295 141.849 102.973 1.00 52.98 O
ATOM 11 C2' U B1728 119.685 144.192 103.193 1.00 53.91 C
ATOM 12 O2' U B1728 119.032 144.036 101.952 1.00 53.46 O
ATOM 13 C1' U B1728 118.752 144.887 104.189 1.00 56.39 C
ATOM 14 N1 U B1728 119.477 145.722 105.163 1.00 58.78 N
ATOM 15 C2 U B1728 119.947 146.967 104.743 1.00 59.73 C
ATOM 16 O2 U B1728 119.789 147.398 103.607 1.00 56.66 O
ATOM 17 N3 U B1728 120.612 147.686 105.708 1.00 60.28 N
ATOM 18 C4 U B1728 120.855 147.303 107.011 1.00 60.89 C
ATOM 19 O4 U B1728 121.458 148.068 107.764 1.00 61.81 O
ATOM 20 C5 U B1728 120.346 146.014 107.362 1.00 60.72 C
ATOM 21 C6 U B1728 119.691 145.288 106.453 1.00 59.68 C
ATOM 22 P U B1729 121.780 141.853 102.364 1.00 53.84 P
ATOM 23 OP1 U B1729 122.112 140.468 101.933 1.00 51.94 O
ATOM 24 OP2 U B1729 122.673 142.559 103.311 1.00 55.99 O
ATOM 25 O5' U B1729 121.668 142.746 101.056 1.00 52.06 O
TER
ATOM 2 P U A1729 121.780 141.853 102.364 1.00 53.84 P
ATOM 3 OP1 U A1729 122.112 140.468 101.933 1.00 51.94 O
ATOM 4 OP2 U A1729 122.673 142.559 103.311 1.00 55.99 O
ATOM 5 O5' U A1729 121.668 142.746 101.056 1.00 52.06 O
ATOM 6 C5' U A1729 122.723 142.737 100.100 1.00 53.72 C
ATOM 7 C4' U A1729 122.213 143.165 98.752 1.00 56.52 C
ATOM 8 O4' U A1729 121.229 142.207 98.272 1.00 57.05 O
ATOM 9 C3' U A1729 121.553 144.537 98.686 1.00 57.88 C
ATOM 10 O3' U A1729 121.908 145.140 97.449 1.00 59.19 O
ATOM 11 C2' U A1729 120.062 144.196 98.713 1.00 57.48 C
ATOM 12 O2' U A1729 119.256 145.146 98.050 1.00 57.06 O
ATOM 13 C1' U A1729 120.031 142.881 97.939 1.00 56.23 C
ATOM 14 N1 U A1729 118.901 142.004 98.285 1.00 55.21 N
ATOM 15 C2 U A1729 118.098 141.546 97.254 1.00 54.51 C
ATOM 16 O2 U A1729 118.254 141.880 96.085 1.00 53.69 O
ATOM 17 N3 U A1729 117.100 140.680 97.643 1.00 52.96 N
ATOM 18 C4 U A1729 116.825 140.242 98.924 1.00 52.54 C
ATOM 19 O4 U A1729 115.988 139.355 99.097 1.00 49.60 O
ATOM 20 C5 U A1729 117.672 140.794 99.931 1.00 54.01 C
ATOM 21 C6 U A1729 118.656 141.632 99.588 1.00 54.95 C
ATOM 22 P C A1730 123.333 145.859 97.303 1.00 58.22 P
ATOM 23 OP1 C A1730 123.451 146.297 95.896 1.00 57.34 O
ATOM 24 OP2 C A1730 124.334 144.929 97.866 1.00 58.70 O
ATOM 25 O5' C A1730 123.234 147.143 98.246 1.00 57.77 O
TER
ATOM 1 O3' C B1727 118.401 141.188 108.725 1.00 58.49 O
ATOM 2 P U B1728 119.731 141.062 107.842 1.00 58.39 P
ATOM 3 OP1 U B1728 119.881 139.658 107.367 1.00 57.45 O
ATOM 4 OP2 U B1728 120.822 141.700 108.636 1.00 59.70 O
ATOM 5 O5' U B1728 119.455 141.989 106.581 1.00 56.49 O
ATOM 6 C5' U B1728 118.509 141.599 105.589 1.00 56.02 C
ATOM 7 C4' U B1728 118.533 142.572 104.449 1.00 54.52 C
ATOM 8 O4' U B1728 118.059 143.868 104.896 1.00 54.41 O
ATOM 9 C3' U B1728 119.905 142.859 103.880 1.00 52.64 C
ATOM 10 O3' U B1728 120.295 141.849 102.973 1.00 52.98 O
ATOM 11 C2' U B1728 119.685 144.192 103.193 1.00 53.91 C
ATOM 12 O2' U B1728 119.032 144.036 101.952 1.00 53.46 O
ATOM 13 C1' U B1728 118.752 144.887 104.189 1.00 56.39 C
ATOM 14 N1 U B1728 119.477 145.722 105.163 1.00 58.78 N
ATOM 15 C2 U B1728 119.947 146.967 104.743 1.00 59.73 C
ATOM 16 O2 U B1728 119.789 147.398 103.607 1.00 56.66 O
ATOM 17 N3 U B1728 120.612 147.686 105.708 1.00 60.28 N
ATOM 18 C4 U B1728 120.855 147.303 107.011 1.00 60.89 C
ATOM 19 O4 U B1728 121.458 148.068 107.764 1.00 61.81 O
ATOM 20 C5 U B1728 120.346 146.014 107.362 1.00 60.72 C
ATOM 21 C6 U B1728 119.691 145.288 106.453 1.00 59.68 C
ATOM 22 P U B1729 121.780 141.853 102.364 1.00 53.84 P
ATOM 23 OP1 U B1729 122.112 140.468 101.933 1.00 51.94 O
ATOM 24 OP2 U B1729 122.673 142.559 103.311 1.00 55.99 O
ATOM 25 O5' U B1729 121.668 142.746 101.056 1.00 52.06 O
TER
Atoms:
C4: (116.825,140.242,98.924)
N3: (117.100,140.680,97.643)
OP1: (122.112,140.468,101.933)
OP2: (122.673,142.559,103.311)
C2: (118.098,141.546,97.254)
C1': (120.031,142.881,97.939)
C3': (121.553,144.537,98.686)
O5': (121.668,142.746,101.056)
O4': (121.229,142.207,98.272)
C5': (122.723,142.737,100.100)
P: (121.780,141.853,102.364)
C4': (122.213,143.165,98.752)
C2': (120.062,144.196,98.713)
O2': (119.256,145.146,98.050)
N1: (118.901,142.004,98.285)
O4: (115.988,139.355,99.097)
O2: (118.254,141.880,96.085)
C6: (118.656,141.632,99.588)
C5: (117.672,140.794,99.931)
O3': (121.908,145.140,97.449)
N3: (117.100,140.680,97.643)
OP1: (122.112,140.468,101.933)
OP2: (122.673,142.559,103.311)
C2: (118.098,141.546,97.254)
C1': (120.031,142.881,97.939)
C3': (121.553,144.537,98.686)
O5': (121.668,142.746,101.056)
O4': (121.229,142.207,98.272)
C5': (122.723,142.737,100.100)
P: (121.780,141.853,102.364)
C4': (122.213,143.165,98.752)
C2': (120.062,144.196,98.713)
O2': (119.256,145.146,98.050)
N1: (118.901,142.004,98.285)
O4: (115.988,139.355,99.097)
O2: (118.254,141.880,96.085)
C6: (118.656,141.632,99.588)
C5: (117.672,140.794,99.931)
O3': (121.908,145.140,97.449)
C4: (120.855,147.303,107.011)
N3: (120.612,147.686,105.708)
OP1: (119.881,139.658,107.367)
OP2: (120.822,141.700,108.636)
C2: (119.947,146.967,104.743)
C1': (118.752,144.887,104.189)
C3': (119.905,142.859,103.880)
O5': (119.455,141.989,106.581)
O4': (118.059,143.868,104.896)
C5': (118.509,141.599,105.589)
P: (119.731,141.062,107.842)
C4': (118.533,142.572,104.449)
C2': (119.685,144.192,103.193)
O2': (119.032,144.036,101.952)
N1: (119.477,145.722,105.163)
O4: (121.458,148.068,107.764)
O2: (119.789,147.398,103.607)
C6: (119.691,145.288,106.453)
C5: (120.346,146.014,107.362)
O3': (120.295,141.849,102.973)
N3: (120.612,147.686,105.708)
OP1: (119.881,139.658,107.367)
OP2: (120.822,141.700,108.636)
C2: (119.947,146.967,104.743)
C1': (118.752,144.887,104.189)
C3': (119.905,142.859,103.880)
O5': (119.455,141.989,106.581)
O4': (118.059,143.868,104.896)
C5': (118.509,141.599,105.589)
P: (119.731,141.062,107.842)
C4': (118.533,142.572,104.449)
C2': (119.685,144.192,103.193)
O2': (119.032,144.036,101.952)
N1: (119.477,145.722,105.163)
O4: (121.458,148.068,107.764)
O2: (119.789,147.398,103.607)
C6: (119.691,145.288,106.453)
C5: (120.346,146.014,107.362)
O3': (120.295,141.849,102.973)
Image (generated by PyMOL):