ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZHO:B16:B15

Extra

PDB:
ATOM 1 O3' U A 15 42.090 -3.449 44.589 1.00 46.51 O
ATOM 2 P U A 16 42.910 -4.767 44.965 1.00 49.56 P
ATOM 3 OP1 U A 16 44.023 -4.697 43.969 1.00 48.76 O
ATOM 4 OP2 U A 16 42.063 -5.982 45.032 1.00 47.40 O
ATOM 5 O5' U A 16 43.485 -4.458 46.423 1.00 51.77 O
ATOM 6 C5' U A 16 44.614 -5.171 46.923 1.00 53.96 C
ATOM 7 C4' U A 16 45.333 -4.378 47.994 1.00 55.69 C
ATOM 8 O4' U A 16 45.847 -3.144 47.432 1.00 56.22 O
ATOM 9 C3' U A 16 44.407 -3.966 49.135 1.00 56.35 C
ATOM 10 O3' U A 16 45.027 -4.204 50.395 1.00 54.48 O
ATOM 11 C2' U A 16 44.005 -2.519 48.842 1.00 57.53 C
ATOM 12 O2' U A 16 43.985 -1.705 49.993 1.00 59.91 O
ATOM 13 C1' U A 16 45.183 -2.042 47.999 1.00 58.25 C
ATOM 14 N1 U A 16 44.964 -1.015 46.978 1.00 61.50 N
ATOM 15 C2 U A 16 45.383 0.272 47.289 1.00 64.17 C
ATOM 16 O2 U A 16 45.900 0.568 48.363 1.00 64.66 O
ATOM 17 N3 U A 16 45.183 1.199 46.298 1.00 64.64 N
ATOM 18 C4 U A 16 44.618 0.979 45.066 1.00 65.03 C
ATOM 19 O4 U A 16 44.508 1.919 44.282 1.00 67.23 O
ATOM 20 C5 U A 16 44.204 -0.373 44.825 1.00 63.90 C
ATOM 21 C6 U A 16 44.386 -1.299 45.768 1.00 62.42 C
ATOM 22 P C A 17 44.171 -4.696 51.654 1.00 54.75 P
ATOM 23 OP1 C A 17 44.807 -4.075 52.837 1.00 55.30 O
ATOM 24 OP2 C A 17 44.051 -6.175 51.574 1.00 56.61 O
ATOM 25 O5' C A 17 42.723 -4.057 51.485 1.00 54.23 O
TER

ATOM 1 O3' C B 14 37.832 -3.417 39.940 1.00 43.38 O
ATOM 2 P U B 15 38.795 -4.523 40.606 1.00 43.46 P
ATOM 3 OP1 U B 15 40.062 -4.586 39.812 1.00 42.61 O
ATOM 4 OP2 U B 15 37.984 -5.744 40.791 1.00 44.36 O
ATOM 5 O5' U B 15 39.113 -3.940 42.056 1.00 44.06 O
ATOM 6 C5' U B 15 40.034 -2.863 42.211 1.00 44.81 C
ATOM 7 C4' U B 15 40.128 -2.450 43.655 1.00 44.76 C
ATOM 8 O4' U B 15 38.797 -2.218 44.162 1.00 44.97 O
ATOM 9 C3' U B 15 40.681 -3.487 44.607 1.00 45.61 C
ATOM 10 O3' U B 15 42.090 -3.449 44.589 1.00 46.51 O
ATOM 11 C2' U B 15 40.140 -3.027 45.952 1.00 45.37 C
ATOM 12 O2' U B 15 40.914 -2.017 46.561 1.00 45.79 O
ATOM 13 C1' U B 15 38.777 -2.469 45.553 1.00 45.24 C
ATOM 14 N1 U B 15 37.701 -3.415 45.831 1.00 46.30 N
ATOM 15 C2 U B 15 37.215 -3.437 47.109 1.00 47.45 C
ATOM 16 O2 U B 15 37.646 -2.706 47.979 1.00 46.91 O
ATOM 17 N3 U B 15 36.211 -4.344 47.334 1.00 48.94 N
ATOM 18 C4 U B 15 35.664 -5.216 46.415 1.00 49.90 C
ATOM 19 O4 U B 15 34.778 -5.999 46.772 1.00 49.97 O
ATOM 20 C5 U B 15 36.228 -5.122 45.100 1.00 49.40 C
ATOM 21 C6 U B 15 37.205 -4.244 44.861 1.00 47.17 C
ATOM 22 P U B 16 42.910 -4.767 44.965 1.00 49.56 P
ATOM 23 OP1 U B 16 44.023 -4.697 43.969 1.00 48.76 O
ATOM 24 OP2 U B 16 42.063 -5.982 45.032 1.00 47.40 O
ATOM 25 O5' U B 16 43.485 -4.458 46.423 1.00 51.77 O
TER

Atoms:
C4: (44.618,0.979,45.066)
N3: (45.183,1.199,46.298)
OP1: (44.023,-4.697,43.969)
OP2: (42.063,-5.982,45.032)
C2: (45.383,0.272,47.289)
C1': (45.183,-2.042,47.999)
C3': (44.407,-3.966,49.135)
O5': (43.485,-4.458,46.423)
O4': (45.847,-3.144,47.432)
C5': (44.614,-5.171,46.923)
P: (42.910,-4.767,44.965)
C4': (45.333,-4.378,47.994)
C2': (44.005,-2.519,48.842)
O2': (43.985,-1.705,49.993)
N1: (44.964,-1.015,46.978)
O4: (44.508,1.919,44.282)
O2: (45.900,0.568,48.363)
C6: (44.386,-1.299,45.768)
C5: (44.204,-0.373,44.825)
O3': (45.027,-4.204,50.395)
C4: (35.664,-5.216,46.415)
N3: (36.211,-4.344,47.334)
OP1: (40.062,-4.586,39.812)
OP2: (37.984,-5.744,40.791)
C2: (37.215,-3.437,47.109)
C1': (38.777,-2.469,45.553)
C3': (40.681,-3.487,44.607)
O5': (39.113,-3.940,42.056)
O4': (38.797,-2.218,44.162)
C5': (40.034,-2.863,42.211)
P: (38.795,-4.523,40.606)
C4': (40.128,-2.450,43.655)
C2': (40.140,-3.027,45.952)
O2': (40.914,-2.017,46.561)
N1: (37.701,-3.415,45.831)
O4: (34.778,-5.999,46.772)
O2: (37.646,-2.706,47.979)
C6: (37.205,-4.244,44.861)
C5: (36.228,-5.122,45.100)
O3': (42.090,-3.449,44.589)
Image (generated by PyMOL):
PyMOL image
show in jmol