Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:921:925
Extra
PDB:
ATOM 1 O3' G A 20 58.148 7.998 112.129 1.00 75.27 O
ATOM 2 P G A 21 59.341 6.928 112.048 1.00 76.15 P
ATOM 3 OP1 G A 21 59.225 6.043 113.230 1.00 76.57 O
ATOM 4 OP2 G A 21 60.617 7.644 111.802 1.00 76.92 O
ATOM 5 O5' G A 21 58.959 6.092 110.747 1.00 77.91 O
ATOM 6 C5' G A 21 59.965 5.429 109.977 1.00 81.80 C
ATOM 7 C4' G A 21 59.804 5.751 108.512 1.00 84.87 C
ATOM 8 O4' G A 21 59.495 7.156 108.342 1.00 83.38 O
ATOM 9 C3' G A 21 61.080 5.512 107.727 1.00 88.95 C
ATOM 10 O3' G A 21 61.138 4.155 107.291 1.00 96.94 O
ATOM 11 C2' G A 21 60.989 6.526 106.591 1.00 86.63 C
ATOM 12 O2' G A 21 60.218 6.057 105.503 1.00 88.13 O
ATOM 13 C1' G A 21 60.258 7.689 107.274 1.00 83.18 C
ATOM 14 N9 G A 21 61.086 8.764 107.820 1.00 79.90 N
ATOM 15 C8 G A 21 61.697 8.791 109.052 1.00 78.73 C
ATOM 16 N7 G A 21 62.303 9.920 109.303 1.00 77.06 N
ATOM 17 C5 G A 21 62.097 10.681 108.161 1.00 76.78 C
ATOM 18 C6 G A 21 62.508 12.002 107.855 1.00 75.01 C
ATOM 19 O6 G A 21 63.145 12.794 108.558 1.00 73.11 O
ATOM 20 N1 G A 21 62.095 12.382 106.584 1.00 74.46 N
ATOM 21 C2 G A 21 61.376 11.597 105.719 1.00 74.96 C
ATOM 22 N2 G A 21 61.082 12.144 104.532 1.00 73.78 N
ATOM 23 N3 G A 21 60.977 10.368 105.995 1.00 76.62 N
ATOM 24 C4 G A 21 61.367 9.976 107.225 1.00 77.94 C
ATOM 25 P U A 22 62.204 3.151 107.954 1.00102.90 P
ATOM 26 OP1 U A 22 62.062 3.252 109.431 1.00102.07 O
ATOM 27 OP2 U A 22 63.526 3.413 107.326 1.00102.57 O
ATOM 28 O5' U A 22 61.729 1.688 107.528 1.00107.21 O
TER
ATOM 1 O3' G B 24 59.864 5.579 96.057 1.00 79.93 O
ATOM 2 P C B 25 61.082 6.626 96.038 1.00 74.46 P
ATOM 3 OP1 C B 25 61.416 6.849 94.608 1.00 74.12 O
ATOM 4 OP2 C B 25 62.140 6.167 96.976 1.00 74.06 O
ATOM 5 O5' C B 25 60.439 7.956 96.627 1.00 71.81 O
ATOM 6 C5' C B 25 59.418 8.658 95.899 1.00 67.44 C
ATOM 7 C4' C B 25 59.167 10.010 96.518 1.00 64.59 C
ATOM 8 O4' C B 25 58.536 9.857 97.817 1.00 63.54 O
ATOM 9 C3' C B 25 60.400 10.843 96.821 1.00 63.25 C
ATOM 10 O3' C B 25 60.912 11.482 95.659 1.00 61.71 O
ATOM 11 C2' C B 25 59.861 11.829 97.845 1.00 62.58 C
ATOM 12 O2' C B 25 59.081 12.842 97.242 1.00 63.70 O
ATOM 13 C1' C B 25 58.938 10.926 98.666 1.00 62.06 C
ATOM 14 N1 C B 25 59.581 10.372 99.878 1.00 60.10 N
ATOM 15 C2 C B 25 59.690 11.186 101.014 1.00 59.05 C
ATOM 16 O2 C B 25 59.259 12.348 100.966 1.00 60.77 O
ATOM 17 N3 C B 25 60.265 10.691 102.132 1.00 57.07 N
ATOM 18 C4 C B 25 60.726 9.439 102.146 1.00 57.53 C
ATOM 19 N4 C B 25 61.284 8.990 103.275 1.00 57.35 N
ATOM 20 C5 C B 25 60.637 8.590 101.006 1.00 57.35 C
ATOM 21 C6 C B 25 60.062 9.091 99.904 1.00 58.95 C
ATOM 22 P C B 26 62.474 11.848 95.579 1.00 60.53 P
ATOM 23 OP1 C B 26 62.700 12.476 94.249 1.00 59.98 O
ATOM 24 OP2 C B 26 63.273 10.662 95.973 1.00 62.08 O
ATOM 25 O5' C B 26 62.662 12.942 96.717 1.00 57.49 O
TER
ATOM 2 P G A 21 59.341 6.928 112.048 1.00 76.15 P
ATOM 3 OP1 G A 21 59.225 6.043 113.230 1.00 76.57 O
ATOM 4 OP2 G A 21 60.617 7.644 111.802 1.00 76.92 O
ATOM 5 O5' G A 21 58.959 6.092 110.747 1.00 77.91 O
ATOM 6 C5' G A 21 59.965 5.429 109.977 1.00 81.80 C
ATOM 7 C4' G A 21 59.804 5.751 108.512 1.00 84.87 C
ATOM 8 O4' G A 21 59.495 7.156 108.342 1.00 83.38 O
ATOM 9 C3' G A 21 61.080 5.512 107.727 1.00 88.95 C
ATOM 10 O3' G A 21 61.138 4.155 107.291 1.00 96.94 O
ATOM 11 C2' G A 21 60.989 6.526 106.591 1.00 86.63 C
ATOM 12 O2' G A 21 60.218 6.057 105.503 1.00 88.13 O
ATOM 13 C1' G A 21 60.258 7.689 107.274 1.00 83.18 C
ATOM 14 N9 G A 21 61.086 8.764 107.820 1.00 79.90 N
ATOM 15 C8 G A 21 61.697 8.791 109.052 1.00 78.73 C
ATOM 16 N7 G A 21 62.303 9.920 109.303 1.00 77.06 N
ATOM 17 C5 G A 21 62.097 10.681 108.161 1.00 76.78 C
ATOM 18 C6 G A 21 62.508 12.002 107.855 1.00 75.01 C
ATOM 19 O6 G A 21 63.145 12.794 108.558 1.00 73.11 O
ATOM 20 N1 G A 21 62.095 12.382 106.584 1.00 74.46 N
ATOM 21 C2 G A 21 61.376 11.597 105.719 1.00 74.96 C
ATOM 22 N2 G A 21 61.082 12.144 104.532 1.00 73.78 N
ATOM 23 N3 G A 21 60.977 10.368 105.995 1.00 76.62 N
ATOM 24 C4 G A 21 61.367 9.976 107.225 1.00 77.94 C
ATOM 25 P U A 22 62.204 3.151 107.954 1.00102.90 P
ATOM 26 OP1 U A 22 62.062 3.252 109.431 1.00102.07 O
ATOM 27 OP2 U A 22 63.526 3.413 107.326 1.00102.57 O
ATOM 28 O5' U A 22 61.729 1.688 107.528 1.00107.21 O
TER
ATOM 1 O3' G B 24 59.864 5.579 96.057 1.00 79.93 O
ATOM 2 P C B 25 61.082 6.626 96.038 1.00 74.46 P
ATOM 3 OP1 C B 25 61.416 6.849 94.608 1.00 74.12 O
ATOM 4 OP2 C B 25 62.140 6.167 96.976 1.00 74.06 O
ATOM 5 O5' C B 25 60.439 7.956 96.627 1.00 71.81 O
ATOM 6 C5' C B 25 59.418 8.658 95.899 1.00 67.44 C
ATOM 7 C4' C B 25 59.167 10.010 96.518 1.00 64.59 C
ATOM 8 O4' C B 25 58.536 9.857 97.817 1.00 63.54 O
ATOM 9 C3' C B 25 60.400 10.843 96.821 1.00 63.25 C
ATOM 10 O3' C B 25 60.912 11.482 95.659 1.00 61.71 O
ATOM 11 C2' C B 25 59.861 11.829 97.845 1.00 62.58 C
ATOM 12 O2' C B 25 59.081 12.842 97.242 1.00 63.70 O
ATOM 13 C1' C B 25 58.938 10.926 98.666 1.00 62.06 C
ATOM 14 N1 C B 25 59.581 10.372 99.878 1.00 60.10 N
ATOM 15 C2 C B 25 59.690 11.186 101.014 1.00 59.05 C
ATOM 16 O2 C B 25 59.259 12.348 100.966 1.00 60.77 O
ATOM 17 N3 C B 25 60.265 10.691 102.132 1.00 57.07 N
ATOM 18 C4 C B 25 60.726 9.439 102.146 1.00 57.53 C
ATOM 19 N4 C B 25 61.284 8.990 103.275 1.00 57.35 N
ATOM 20 C5 C B 25 60.637 8.590 101.006 1.00 57.35 C
ATOM 21 C6 C B 25 60.062 9.091 99.904 1.00 58.95 C
ATOM 22 P C B 26 62.474 11.848 95.579 1.00 60.53 P
ATOM 23 OP1 C B 26 62.700 12.476 94.249 1.00 59.98 O
ATOM 24 OP2 C B 26 63.273 10.662 95.973 1.00 62.08 O
ATOM 25 O5' C B 26 62.662 12.942 96.717 1.00 57.49 O
TER
Atoms:
OP1: (59.225,6.043,113.230)
OP2: (60.617,7.644,111.802)
C3': (61.080,5.512,107.727)
C1': (60.258,7.689,107.274)
C5': (59.965,5.429,109.977)
O6: (63.145,12.794,108.558)
O4': (59.495,7.156,108.342)
C8: (61.697,8.791,109.052)
C2: (61.376,11.597,105.719)
C6: (62.508,12.002,107.855)
C5: (62.097,10.681,108.161)
C4: (61.367,9.976,107.225)
P: (59.341,6.928,112.048)
C4': (59.804,5.751,108.512)
C2': (60.989,6.526,106.591)
O2': (60.218,6.057,105.503)
N1: (62.095,12.382,106.584)
N2: (61.082,12.144,104.532)
N3: (60.977,10.368,105.995)
N7: (62.303,9.920,109.303)
N9: (61.086,8.764,107.820)
O5': (58.959,6.092,110.747)
O3': (61.138,4.155,107.291)
OP2: (60.617,7.644,111.802)
C3': (61.080,5.512,107.727)
C1': (60.258,7.689,107.274)
C5': (59.965,5.429,109.977)
O6: (63.145,12.794,108.558)
O4': (59.495,7.156,108.342)
C8: (61.697,8.791,109.052)
C2: (61.376,11.597,105.719)
C6: (62.508,12.002,107.855)
C5: (62.097,10.681,108.161)
C4: (61.367,9.976,107.225)
P: (59.341,6.928,112.048)
C4': (59.804,5.751,108.512)
C2': (60.989,6.526,106.591)
O2': (60.218,6.057,105.503)
N1: (62.095,12.382,106.584)
N2: (61.082,12.144,104.532)
N3: (60.977,10.368,105.995)
N7: (62.303,9.920,109.303)
N9: (61.086,8.764,107.820)
O5': (58.959,6.092,110.747)
O3': (61.138,4.155,107.291)
C2: (59.690,11.186,101.014)
OP1: (61.416,6.849,94.608)
OP2: (62.140,6.167,96.976)
C4: (60.726,9.439,102.146)
O5': (60.439,7.956,96.627)
C3': (60.400,10.843,96.821)
C1': (58.938,10.926,98.666)
O4': (58.536,9.857,97.817)
C5': (59.418,8.658,95.899)
P: (61.082,6.626,96.038)
O2: (59.259,12.348,100.966)
C4': (59.167,10.010,96.518)
C2': (59.861,11.829,97.845)
O2': (59.081,12.842,97.242)
N1: (59.581,10.372,99.878)
N3: (60.265,10.691,102.132)
N4: (61.284,8.990,103.275)
C6: (60.062,9.091,99.904)
C5: (60.637,8.590,101.006)
O3': (60.912,11.482,95.659)
OP1: (61.416,6.849,94.608)
OP2: (62.140,6.167,96.976)
C4: (60.726,9.439,102.146)
O5': (60.439,7.956,96.627)
C3': (60.400,10.843,96.821)
C1': (58.938,10.926,98.666)
O4': (58.536,9.857,97.817)
C5': (59.418,8.658,95.899)
P: (61.082,6.626,96.038)
O2: (59.259,12.348,100.966)
C4': (59.167,10.010,96.518)
C2': (59.861,11.829,97.845)
O2': (59.081,12.842,97.242)
N1: (59.581,10.372,99.878)
N3: (60.265,10.691,102.132)
N4: (61.284,8.990,103.275)
C6: (60.062,9.091,99.904)
C5: (60.637,8.590,101.006)
O3': (60.912,11.482,95.659)
Image (generated by PyMOL):