Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:921:925
Extra
PDB:
ATOM 1 O3' G A 20 58.215 8.832 112.258 1.00 80.80 O
ATOM 2 P G A 21 59.382 7.730 112.238 1.00 81.55 P
ATOM 3 OP1 G A 21 59.151 6.831 113.392 1.00 82.48 O
ATOM 4 OP2 G A 21 60.697 8.410 112.099 1.00 81.32 O
ATOM 5 O5' G A 21 59.069 6.928 110.898 1.00 83.41 O
ATOM 6 C5' G A 21 60.123 6.340 110.131 1.00 87.65 C
ATOM 7 C4' G A 21 59.938 6.645 108.665 1.00 90.75 C
ATOM 8 O4' G A 21 59.592 8.040 108.487 1.00 89.37 O
ATOM 9 C3' G A 21 61.209 6.435 107.865 1.00 94.63 C
ATOM 10 O3' G A 21 61.289 5.078 107.439 1.00103.53 O
ATOM 11 C2' G A 21 61.061 7.425 106.715 1.00 91.91 C
ATOM 12 O2' G A 21 60.264 6.920 105.665 1.00 93.05 O
ATOM 13 C1' G A 21 60.323 8.581 107.400 1.00 88.51 C
ATOM 14 N9 G A 21 61.153 9.666 107.925 1.00 85.06 N
ATOM 15 C8 G A 21 61.797 9.697 109.141 1.00 83.74 C
ATOM 16 N7 G A 21 62.392 10.833 109.377 1.00 82.23 N
ATOM 17 C5 G A 21 62.144 11.595 108.243 1.00 81.77 C
ATOM 18 C6 G A 21 62.522 12.925 107.931 1.00 80.51 C
ATOM 19 O6 G A 21 63.157 13.729 108.624 1.00 79.76 O
ATOM 20 N1 G A 21 62.073 13.300 106.671 1.00 79.45 N
ATOM 21 C2 G A 21 61.349 12.505 105.823 1.00 79.20 C
ATOM 22 N2 G A 21 61.021 13.046 104.644 1.00 78.28 N
ATOM 23 N3 G A 21 60.975 11.269 106.106 1.00 80.75 N
ATOM 24 C4 G A 21 61.403 10.881 107.325 1.00 82.40 C
ATOM 25 P U A 22 62.550 4.176 107.864 1.00109.61 P
ATOM 26 OP1 U A 22 62.956 4.572 109.243 1.00109.03 O
ATOM 27 OP2 U A 22 63.547 4.235 106.762 1.00109.44 O
ATOM 28 O5' U A 22 61.966 2.692 107.922 1.00113.12 O
TER
ATOM 1 O3' G B 24 60.005 6.311 96.357 1.00 87.93 O
ATOM 2 P C B 25 61.206 7.379 96.358 1.00 83.94 P
ATOM 3 OP1 C B 25 61.571 7.602 94.938 1.00 83.61 O
ATOM 4 OP2 C B 25 62.250 6.955 97.326 1.00 83.98 O
ATOM 5 O5' C B 25 60.531 8.705 96.922 1.00 81.12 O
ATOM 6 C5' C B 25 59.507 9.383 96.174 1.00 76.42 C
ATOM 7 C4' C B 25 59.247 10.748 96.762 1.00 73.57 C
ATOM 8 O4' C B 25 58.599 10.623 98.056 1.00 72.54 O
ATOM 9 C3' C B 25 60.482 11.577 97.061 1.00 72.57 C
ATOM 10 O3' C B 25 61.011 12.196 95.899 1.00 69.37 O
ATOM 11 C2' C B 25 59.952 12.581 98.074 1.00 72.76 C
ATOM 12 O2' C B 25 59.222 13.631 97.464 1.00 73.22 O
ATOM 13 C1' C B 25 59.006 11.697 98.894 1.00 72.30 C
ATOM 14 N1 C B 25 59.633 11.146 100.116 1.00 70.80 N
ATOM 15 C2 C B 25 59.802 11.989 101.225 1.00 70.81 C
ATOM 16 O2 C B 25 59.416 13.166 101.152 1.00 71.56 O
ATOM 17 N3 C B 25 60.380 11.502 102.344 1.00 69.85 N
ATOM 18 C4 C B 25 60.783 10.231 102.387 1.00 69.59 C
ATOM 19 N4 C B 25 61.356 9.796 103.511 1.00 69.62 N
ATOM 20 C5 C B 25 60.619 9.351 101.279 1.00 68.56 C
ATOM 21 C6 C B 25 60.046 9.844 100.176 1.00 69.37 C
ATOM 22 P C B 26 62.569 12.565 95.843 1.00 66.09 P
ATOM 23 OP1 C B 26 62.822 13.149 94.499 1.00 66.95 O
ATOM 24 OP2 C B 26 63.350 11.388 96.288 1.00 67.07 O
ATOM 25 O5' C B 26 62.720 13.690 96.958 1.00 65.44 O
TER
ATOM 2 P G A 21 59.382 7.730 112.238 1.00 81.55 P
ATOM 3 OP1 G A 21 59.151 6.831 113.392 1.00 82.48 O
ATOM 4 OP2 G A 21 60.697 8.410 112.099 1.00 81.32 O
ATOM 5 O5' G A 21 59.069 6.928 110.898 1.00 83.41 O
ATOM 6 C5' G A 21 60.123 6.340 110.131 1.00 87.65 C
ATOM 7 C4' G A 21 59.938 6.645 108.665 1.00 90.75 C
ATOM 8 O4' G A 21 59.592 8.040 108.487 1.00 89.37 O
ATOM 9 C3' G A 21 61.209 6.435 107.865 1.00 94.63 C
ATOM 10 O3' G A 21 61.289 5.078 107.439 1.00103.53 O
ATOM 11 C2' G A 21 61.061 7.425 106.715 1.00 91.91 C
ATOM 12 O2' G A 21 60.264 6.920 105.665 1.00 93.05 O
ATOM 13 C1' G A 21 60.323 8.581 107.400 1.00 88.51 C
ATOM 14 N9 G A 21 61.153 9.666 107.925 1.00 85.06 N
ATOM 15 C8 G A 21 61.797 9.697 109.141 1.00 83.74 C
ATOM 16 N7 G A 21 62.392 10.833 109.377 1.00 82.23 N
ATOM 17 C5 G A 21 62.144 11.595 108.243 1.00 81.77 C
ATOM 18 C6 G A 21 62.522 12.925 107.931 1.00 80.51 C
ATOM 19 O6 G A 21 63.157 13.729 108.624 1.00 79.76 O
ATOM 20 N1 G A 21 62.073 13.300 106.671 1.00 79.45 N
ATOM 21 C2 G A 21 61.349 12.505 105.823 1.00 79.20 C
ATOM 22 N2 G A 21 61.021 13.046 104.644 1.00 78.28 N
ATOM 23 N3 G A 21 60.975 11.269 106.106 1.00 80.75 N
ATOM 24 C4 G A 21 61.403 10.881 107.325 1.00 82.40 C
ATOM 25 P U A 22 62.550 4.176 107.864 1.00109.61 P
ATOM 26 OP1 U A 22 62.956 4.572 109.243 1.00109.03 O
ATOM 27 OP2 U A 22 63.547 4.235 106.762 1.00109.44 O
ATOM 28 O5' U A 22 61.966 2.692 107.922 1.00113.12 O
TER
ATOM 1 O3' G B 24 60.005 6.311 96.357 1.00 87.93 O
ATOM 2 P C B 25 61.206 7.379 96.358 1.00 83.94 P
ATOM 3 OP1 C B 25 61.571 7.602 94.938 1.00 83.61 O
ATOM 4 OP2 C B 25 62.250 6.955 97.326 1.00 83.98 O
ATOM 5 O5' C B 25 60.531 8.705 96.922 1.00 81.12 O
ATOM 6 C5' C B 25 59.507 9.383 96.174 1.00 76.42 C
ATOM 7 C4' C B 25 59.247 10.748 96.762 1.00 73.57 C
ATOM 8 O4' C B 25 58.599 10.623 98.056 1.00 72.54 O
ATOM 9 C3' C B 25 60.482 11.577 97.061 1.00 72.57 C
ATOM 10 O3' C B 25 61.011 12.196 95.899 1.00 69.37 O
ATOM 11 C2' C B 25 59.952 12.581 98.074 1.00 72.76 C
ATOM 12 O2' C B 25 59.222 13.631 97.464 1.00 73.22 O
ATOM 13 C1' C B 25 59.006 11.697 98.894 1.00 72.30 C
ATOM 14 N1 C B 25 59.633 11.146 100.116 1.00 70.80 N
ATOM 15 C2 C B 25 59.802 11.989 101.225 1.00 70.81 C
ATOM 16 O2 C B 25 59.416 13.166 101.152 1.00 71.56 O
ATOM 17 N3 C B 25 60.380 11.502 102.344 1.00 69.85 N
ATOM 18 C4 C B 25 60.783 10.231 102.387 1.00 69.59 C
ATOM 19 N4 C B 25 61.356 9.796 103.511 1.00 69.62 N
ATOM 20 C5 C B 25 60.619 9.351 101.279 1.00 68.56 C
ATOM 21 C6 C B 25 60.046 9.844 100.176 1.00 69.37 C
ATOM 22 P C B 26 62.569 12.565 95.843 1.00 66.09 P
ATOM 23 OP1 C B 26 62.822 13.149 94.499 1.00 66.95 O
ATOM 24 OP2 C B 26 63.350 11.388 96.288 1.00 67.07 O
ATOM 25 O5' C B 26 62.720 13.690 96.958 1.00 65.44 O
TER
Atoms:
OP1: (59.151,6.831,113.392)
OP2: (60.697,8.410,112.099)
C3': (61.209,6.435,107.865)
C1': (60.323,8.581,107.400)
C5': (60.123,6.340,110.131)
O6: (63.157,13.729,108.624)
O4': (59.592,8.040,108.487)
C8: (61.797,9.697,109.141)
C2: (61.349,12.505,105.823)
C6: (62.522,12.925,107.931)
C5: (62.144,11.595,108.243)
C4: (61.403,10.881,107.325)
P: (59.382,7.730,112.238)
C4': (59.938,6.645,108.665)
C2': (61.061,7.425,106.715)
O2': (60.264,6.920,105.665)
N1: (62.073,13.300,106.671)
N2: (61.021,13.046,104.644)
N3: (60.975,11.269,106.106)
N7: (62.392,10.833,109.377)
N9: (61.153,9.666,107.925)
O5': (59.069,6.928,110.898)
O3': (61.289,5.078,107.439)
OP2: (60.697,8.410,112.099)
C3': (61.209,6.435,107.865)
C1': (60.323,8.581,107.400)
C5': (60.123,6.340,110.131)
O6: (63.157,13.729,108.624)
O4': (59.592,8.040,108.487)
C8: (61.797,9.697,109.141)
C2: (61.349,12.505,105.823)
C6: (62.522,12.925,107.931)
C5: (62.144,11.595,108.243)
C4: (61.403,10.881,107.325)
P: (59.382,7.730,112.238)
C4': (59.938,6.645,108.665)
C2': (61.061,7.425,106.715)
O2': (60.264,6.920,105.665)
N1: (62.073,13.300,106.671)
N2: (61.021,13.046,104.644)
N3: (60.975,11.269,106.106)
N7: (62.392,10.833,109.377)
N9: (61.153,9.666,107.925)
O5': (59.069,6.928,110.898)
O3': (61.289,5.078,107.439)
C2: (59.802,11.989,101.225)
OP1: (61.571,7.602,94.938)
OP2: (62.250,6.955,97.326)
C4: (60.783,10.231,102.387)
O5': (60.531,8.705,96.922)
C3': (60.482,11.577,97.061)
C1': (59.006,11.697,98.894)
O4': (58.599,10.623,98.056)
C5': (59.507,9.383,96.174)
P: (61.206,7.379,96.358)
O2: (59.416,13.166,101.152)
C4': (59.247,10.748,96.762)
C2': (59.952,12.581,98.074)
O2': (59.222,13.631,97.464)
N1: (59.633,11.146,100.116)
N3: (60.380,11.502,102.344)
N4: (61.356,9.796,103.511)
C6: (60.046,9.844,100.176)
C5: (60.619,9.351,101.279)
O3': (61.011,12.196,95.899)
OP1: (61.571,7.602,94.938)
OP2: (62.250,6.955,97.326)
C4: (60.783,10.231,102.387)
O5': (60.531,8.705,96.922)
C3': (60.482,11.577,97.061)
C1': (59.006,11.697,98.894)
O4': (58.599,10.623,98.056)
C5': (59.507,9.383,96.174)
P: (61.206,7.379,96.358)
O2: (59.416,13.166,101.152)
C4': (59.247,10.748,96.762)
C2': (59.952,12.581,98.074)
O2': (59.222,13.631,97.464)
N1: (59.633,11.146,100.116)
N3: (60.380,11.502,102.344)
N4: (61.356,9.796,103.511)
C6: (60.046,9.844,100.176)
C5: (60.619,9.351,101.279)
O3': (61.011,12.196,95.899)
Image (generated by PyMOL):