Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:921:925
Extra
PDB:
ATOM 1 O3' G A 20 58.190 8.659 112.032 1.00 80.62 O
ATOM 2 P G A 21 59.366 7.565 112.021 1.00 82.88 P
ATOM 3 OP1 G A 21 59.070 6.588 113.094 1.00 83.04 O
ATOM 4 OP2 G A 21 60.682 8.260 112.014 1.00 82.47 O
ATOM 5 O5' G A 21 59.144 6.843 110.617 1.00 85.37 O
ATOM 6 C5' G A 21 60.250 6.344 109.862 1.00 90.85 C
ATOM 7 C4' G A 21 60.076 6.669 108.398 1.00 95.46 C
ATOM 8 O4' G A 21 59.683 8.055 108.246 1.00 94.85 O
ATOM 9 C3' G A 21 61.365 6.531 107.608 1.00 99.54 C
ATOM 10 O3' G A 21 61.523 5.201 107.137 1.00108.03 O
ATOM 11 C2' G A 21 61.173 7.519 106.466 1.00 97.43 C
ATOM 12 O2' G A 21 60.405 6.974 105.413 1.00 97.67 O
ATOM 13 C1' G A 21 60.388 8.636 107.160 1.00 94.86 C
ATOM 14 N9 G A 21 61.202 9.726 107.694 1.00 92.98 N
ATOM 15 C8 G A 21 61.822 9.769 108.922 1.00 92.26 C
ATOM 16 N7 G A 21 62.423 10.903 109.153 1.00 91.16 N
ATOM 17 C5 G A 21 62.199 11.651 108.006 1.00 90.50 C
ATOM 18 C6 G A 21 62.590 12.967 107.686 1.00 89.40 C
ATOM 19 O6 G A 21 63.216 13.772 108.380 1.00 89.54 O
ATOM 20 N1 G A 21 62.165 13.331 106.416 1.00 88.88 N
ATOM 21 C2 G A 21 61.448 12.532 105.565 1.00 88.89 C
ATOM 22 N2 G A 21 61.138 13.065 104.377 1.00 88.96 N
ATOM 23 N3 G A 21 61.062 11.305 105.856 1.00 89.36 N
ATOM 24 C4 G A 21 61.468 10.931 107.086 1.00 90.97 C
ATOM 25 P U A 22 62.279 4.117 108.049 1.00113.92 P
ATOM 26 OP1 U A 22 61.325 3.686 109.105 1.00113.36 O
ATOM 27 OP2 U A 22 63.609 4.667 108.434 1.00113.31 O
ATOM 28 O5' U A 22 62.483 2.887 107.058 1.00117.53 O
TER
ATOM 1 O3' G B 24 59.999 6.267 96.109 1.00 86.33 O
ATOM 2 P C B 25 61.278 7.236 96.201 1.00 80.65 P
ATOM 3 OP1 C B 25 61.776 7.423 94.820 1.00 80.72 O
ATOM 4 OP2 C B 25 62.203 6.742 97.252 1.00 81.18 O
ATOM 5 O5' C B 25 60.664 8.614 96.703 1.00 78.47 O
ATOM 6 C5' C B 25 59.632 9.270 95.951 1.00 73.71 C
ATOM 7 C4' C B 25 59.330 10.623 96.543 1.00 70.40 C
ATOM 8 O4' C B 25 58.673 10.472 97.826 1.00 69.14 O
ATOM 9 C3' C B 25 60.534 11.491 96.857 1.00 69.20 C
ATOM 10 O3' C B 25 61.040 12.132 95.694 1.00 67.66 O
ATOM 11 C2' C B 25 59.957 12.473 97.866 1.00 69.32 C
ATOM 12 O2' C B 25 59.192 13.500 97.260 1.00 71.00 O
ATOM 13 C1' C B 25 59.026 11.559 98.668 1.00 68.59 C
ATOM 14 N1 C B 25 59.634 11.034 99.908 1.00 67.23 N
ATOM 15 C2 C B 25 59.813 11.902 100.990 1.00 66.86 C
ATOM 16 O2 C B 25 59.462 13.084 100.880 1.00 67.73 O
ATOM 17 N3 C B 25 60.364 11.434 102.127 1.00 66.82 N
ATOM 18 C4 C B 25 60.733 10.157 102.213 1.00 66.95 C
ATOM 19 N4 C B 25 61.278 9.741 103.359 1.00 67.76 N
ATOM 20 C5 C B 25 60.564 9.250 101.131 1.00 65.97 C
ATOM 21 C6 C B 25 60.016 9.725 100.009 1.00 66.80 C
ATOM 22 P C B 26 62.595 12.516 95.615 1.00 65.28 P
ATOM 23 OP1 C B 26 62.837 13.097 94.269 1.00 65.11 O
ATOM 24 OP2 C B 26 63.386 11.346 96.062 1.00 66.76 O
ATOM 25 O5' C B 26 62.751 13.650 96.719 1.00 64.59 O
TER
ATOM 2 P G A 21 59.366 7.565 112.021 1.00 82.88 P
ATOM 3 OP1 G A 21 59.070 6.588 113.094 1.00 83.04 O
ATOM 4 OP2 G A 21 60.682 8.260 112.014 1.00 82.47 O
ATOM 5 O5' G A 21 59.144 6.843 110.617 1.00 85.37 O
ATOM 6 C5' G A 21 60.250 6.344 109.862 1.00 90.85 C
ATOM 7 C4' G A 21 60.076 6.669 108.398 1.00 95.46 C
ATOM 8 O4' G A 21 59.683 8.055 108.246 1.00 94.85 O
ATOM 9 C3' G A 21 61.365 6.531 107.608 1.00 99.54 C
ATOM 10 O3' G A 21 61.523 5.201 107.137 1.00108.03 O
ATOM 11 C2' G A 21 61.173 7.519 106.466 1.00 97.43 C
ATOM 12 O2' G A 21 60.405 6.974 105.413 1.00 97.67 O
ATOM 13 C1' G A 21 60.388 8.636 107.160 1.00 94.86 C
ATOM 14 N9 G A 21 61.202 9.726 107.694 1.00 92.98 N
ATOM 15 C8 G A 21 61.822 9.769 108.922 1.00 92.26 C
ATOM 16 N7 G A 21 62.423 10.903 109.153 1.00 91.16 N
ATOM 17 C5 G A 21 62.199 11.651 108.006 1.00 90.50 C
ATOM 18 C6 G A 21 62.590 12.967 107.686 1.00 89.40 C
ATOM 19 O6 G A 21 63.216 13.772 108.380 1.00 89.54 O
ATOM 20 N1 G A 21 62.165 13.331 106.416 1.00 88.88 N
ATOM 21 C2 G A 21 61.448 12.532 105.565 1.00 88.89 C
ATOM 22 N2 G A 21 61.138 13.065 104.377 1.00 88.96 N
ATOM 23 N3 G A 21 61.062 11.305 105.856 1.00 89.36 N
ATOM 24 C4 G A 21 61.468 10.931 107.086 1.00 90.97 C
ATOM 25 P U A 22 62.279 4.117 108.049 1.00113.92 P
ATOM 26 OP1 U A 22 61.325 3.686 109.105 1.00113.36 O
ATOM 27 OP2 U A 22 63.609 4.667 108.434 1.00113.31 O
ATOM 28 O5' U A 22 62.483 2.887 107.058 1.00117.53 O
TER
ATOM 1 O3' G B 24 59.999 6.267 96.109 1.00 86.33 O
ATOM 2 P C B 25 61.278 7.236 96.201 1.00 80.65 P
ATOM 3 OP1 C B 25 61.776 7.423 94.820 1.00 80.72 O
ATOM 4 OP2 C B 25 62.203 6.742 97.252 1.00 81.18 O
ATOM 5 O5' C B 25 60.664 8.614 96.703 1.00 78.47 O
ATOM 6 C5' C B 25 59.632 9.270 95.951 1.00 73.71 C
ATOM 7 C4' C B 25 59.330 10.623 96.543 1.00 70.40 C
ATOM 8 O4' C B 25 58.673 10.472 97.826 1.00 69.14 O
ATOM 9 C3' C B 25 60.534 11.491 96.857 1.00 69.20 C
ATOM 10 O3' C B 25 61.040 12.132 95.694 1.00 67.66 O
ATOM 11 C2' C B 25 59.957 12.473 97.866 1.00 69.32 C
ATOM 12 O2' C B 25 59.192 13.500 97.260 1.00 71.00 O
ATOM 13 C1' C B 25 59.026 11.559 98.668 1.00 68.59 C
ATOM 14 N1 C B 25 59.634 11.034 99.908 1.00 67.23 N
ATOM 15 C2 C B 25 59.813 11.902 100.990 1.00 66.86 C
ATOM 16 O2 C B 25 59.462 13.084 100.880 1.00 67.73 O
ATOM 17 N3 C B 25 60.364 11.434 102.127 1.00 66.82 N
ATOM 18 C4 C B 25 60.733 10.157 102.213 1.00 66.95 C
ATOM 19 N4 C B 25 61.278 9.741 103.359 1.00 67.76 N
ATOM 20 C5 C B 25 60.564 9.250 101.131 1.00 65.97 C
ATOM 21 C6 C B 25 60.016 9.725 100.009 1.00 66.80 C
ATOM 22 P C B 26 62.595 12.516 95.615 1.00 65.28 P
ATOM 23 OP1 C B 26 62.837 13.097 94.269 1.00 65.11 O
ATOM 24 OP2 C B 26 63.386 11.346 96.062 1.00 66.76 O
ATOM 25 O5' C B 26 62.751 13.650 96.719 1.00 64.59 O
TER
Atoms:
OP1: (59.070,6.588,113.094)
OP2: (60.682,8.260,112.014)
C3': (61.365,6.531,107.608)
C1': (60.388,8.636,107.160)
C5': (60.250,6.344,109.862)
O6: (63.216,13.772,108.380)
O4': (59.683,8.055,108.246)
C8: (61.822,9.769,108.922)
C2: (61.448,12.532,105.565)
C6: (62.590,12.967,107.686)
C5: (62.199,11.651,108.006)
C4: (61.468,10.931,107.086)
P: (59.366,7.565,112.021)
C4': (60.076,6.669,108.398)
C2': (61.173,7.519,106.466)
O2': (60.405,6.974,105.413)
N1: (62.165,13.331,106.416)
N2: (61.138,13.065,104.377)
N3: (61.062,11.305,105.856)
N7: (62.423,10.903,109.153)
N9: (61.202,9.726,107.694)
O5': (59.144,6.843,110.617)
O3': (61.523,5.201,107.137)
OP2: (60.682,8.260,112.014)
C3': (61.365,6.531,107.608)
C1': (60.388,8.636,107.160)
C5': (60.250,6.344,109.862)
O6: (63.216,13.772,108.380)
O4': (59.683,8.055,108.246)
C8: (61.822,9.769,108.922)
C2: (61.448,12.532,105.565)
C6: (62.590,12.967,107.686)
C5: (62.199,11.651,108.006)
C4: (61.468,10.931,107.086)
P: (59.366,7.565,112.021)
C4': (60.076,6.669,108.398)
C2': (61.173,7.519,106.466)
O2': (60.405,6.974,105.413)
N1: (62.165,13.331,106.416)
N2: (61.138,13.065,104.377)
N3: (61.062,11.305,105.856)
N7: (62.423,10.903,109.153)
N9: (61.202,9.726,107.694)
O5': (59.144,6.843,110.617)
O3': (61.523,5.201,107.137)
C2: (59.813,11.902,100.990)
OP1: (61.776,7.423,94.820)
OP2: (62.203,6.742,97.252)
C4: (60.733,10.157,102.213)
O5': (60.664,8.614,96.703)
C3': (60.534,11.491,96.857)
C1': (59.026,11.559,98.668)
O4': (58.673,10.472,97.826)
C5': (59.632,9.270,95.951)
P: (61.278,7.236,96.201)
O2: (59.462,13.084,100.880)
C4': (59.330,10.623,96.543)
C2': (59.957,12.473,97.866)
O2': (59.192,13.500,97.260)
N1: (59.634,11.034,99.908)
N3: (60.364,11.434,102.127)
N4: (61.278,9.741,103.359)
C6: (60.016,9.725,100.009)
C5: (60.564,9.250,101.131)
O3': (61.040,12.132,95.694)
OP1: (61.776,7.423,94.820)
OP2: (62.203,6.742,97.252)
C4: (60.733,10.157,102.213)
O5': (60.664,8.614,96.703)
C3': (60.534,11.491,96.857)
C1': (59.026,11.559,98.668)
O4': (58.673,10.472,97.826)
C5': (59.632,9.270,95.951)
P: (61.278,7.236,96.201)
O2: (59.462,13.084,100.880)
C4': (59.330,10.623,96.543)
C2': (59.957,12.473,97.866)
O2': (59.192,13.500,97.260)
N1: (59.634,11.034,99.908)
N3: (60.364,11.434,102.127)
N4: (61.278,9.741,103.359)
C6: (60.016,9.725,100.009)
C5: (60.564,9.250,101.131)
O3': (61.040,12.132,95.694)
Image (generated by PyMOL):