Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:921:925
Extra
PDB:
ATOM 1 O3' G A 20 58.249 8.878 112.549 1.00 87.51 O
ATOM 2 P G A 21 59.362 7.717 112.608 1.00 89.93 P
ATOM 3 OP1 G A 21 58.926 6.745 113.640 1.00 89.09 O
ATOM 4 OP2 G A 21 60.722 8.323 112.705 1.00 88.36 O
ATOM 5 O5' G A 21 59.194 7.022 111.184 1.00 91.75 O
ATOM 6 C5' G A 21 60.327 6.518 110.475 1.00 96.48 C
ATOM 7 C4' G A 21 60.202 6.827 109.004 1.00 99.97 C
ATOM 8 O4' G A 21 59.821 8.211 108.816 1.00 98.88 O
ATOM 9 C3' G A 21 61.517 6.673 108.265 1.00103.73 C
ATOM 10 O3' G A 21 61.679 5.325 107.848 1.00112.38 O
ATOM 11 C2' G A 21 61.372 7.641 107.100 1.00101.13 C
ATOM 12 O2' G A 21 60.632 7.088 106.032 1.00101.56 O
ATOM 13 C1' G A 21 60.569 8.772 107.748 1.00 98.11 C
ATOM 14 N9 G A 21 61.360 9.878 108.287 1.00 94.57 N
ATOM 15 C8 G A 21 61.915 9.960 109.542 1.00 93.64 C
ATOM 16 N7 G A 21 62.507 11.101 109.768 1.00 92.57 N
ATOM 17 C5 G A 21 62.345 11.812 108.587 1.00 91.04 C
ATOM 18 C6 G A 21 62.754 13.119 108.246 1.00 89.05 C
ATOM 19 O6 G A 21 63.342 13.947 108.945 1.00 87.95 O
ATOM 20 N1 G A 21 62.397 13.441 106.946 1.00 88.31 N
ATOM 21 C2 G A 21 61.722 12.616 106.088 1.00 88.84 C
ATOM 22 N2 G A 21 61.471 13.109 104.872 1.00 89.39 N
ATOM 23 N3 G A 21 61.320 11.400 106.396 1.00 89.99 N
ATOM 24 C4 G A 21 61.661 11.063 107.654 1.00 91.91 C
ATOM 25 P U A 22 62.927 4.468 108.381 1.00118.45 P
ATOM 26 OP1 U A 22 63.196 4.885 109.790 1.00117.34 O
ATOM 27 OP2 U A 22 64.014 4.562 107.366 1.00118.15 O
ATOM 28 O5' U A 22 62.383 2.967 108.386 1.00121.82 O
TER
ATOM 1 O3' G B 24 59.961 6.371 96.637 1.00 95.80 O
ATOM 2 P C B 25 61.278 7.285 96.751 1.00 91.15 P
ATOM 3 OP1 C B 25 61.816 7.441 95.379 1.00 91.91 O
ATOM 4 OP2 C B 25 62.156 6.755 97.823 1.00 91.79 O
ATOM 5 O5' C B 25 60.713 8.692 97.229 1.00 88.48 O
ATOM 6 C5' C B 25 59.752 9.402 96.430 1.00 83.91 C
ATOM 7 C4' C B 25 59.465 10.757 97.031 1.00 80.38 C
ATOM 8 O4' C B 25 58.768 10.608 98.296 1.00 79.41 O
ATOM 9 C3' C B 25 60.678 11.597 97.384 1.00 78.76 C
ATOM 10 O3' C B 25 61.219 12.240 96.237 1.00 76.85 O
ATOM 11 C2' C B 25 60.096 12.582 98.388 1.00 78.91 C
ATOM 12 O2' C B 25 59.374 13.630 97.768 1.00 79.11 O
ATOM 13 C1' C B 25 59.125 11.679 99.160 1.00 78.30 C
ATOM 14 N1 C B 25 59.695 11.127 100.409 1.00 75.74 N
ATOM 15 C2 C B 25 59.887 11.986 101.497 1.00 75.16 C
ATOM 16 O2 C B 25 59.564 13.180 101.390 1.00 75.74 O
ATOM 17 N3 C B 25 60.420 11.498 102.636 1.00 73.90 N
ATOM 18 C4 C B 25 60.754 10.212 102.717 1.00 72.76 C
ATOM 19 N4 C B 25 61.282 9.780 103.860 1.00 73.18 N
ATOM 20 C5 C B 25 60.565 9.315 101.632 1.00 71.99 C
ATOM 21 C6 C B 25 60.037 9.808 100.509 1.00 73.64 C
ATOM 22 P C B 26 62.771 12.640 96.209 1.00 73.44 P
ATOM 23 OP1 C B 26 63.023 13.243 94.872 1.00 73.56 O
ATOM 24 OP2 C B 26 63.577 11.476 96.654 1.00 72.95 O
ATOM 25 O5' C B 26 62.870 13.767 97.326 1.00 72.21 O
TER
ATOM 2 P G A 21 59.362 7.717 112.608 1.00 89.93 P
ATOM 3 OP1 G A 21 58.926 6.745 113.640 1.00 89.09 O
ATOM 4 OP2 G A 21 60.722 8.323 112.705 1.00 88.36 O
ATOM 5 O5' G A 21 59.194 7.022 111.184 1.00 91.75 O
ATOM 6 C5' G A 21 60.327 6.518 110.475 1.00 96.48 C
ATOM 7 C4' G A 21 60.202 6.827 109.004 1.00 99.97 C
ATOM 8 O4' G A 21 59.821 8.211 108.816 1.00 98.88 O
ATOM 9 C3' G A 21 61.517 6.673 108.265 1.00103.73 C
ATOM 10 O3' G A 21 61.679 5.325 107.848 1.00112.38 O
ATOM 11 C2' G A 21 61.372 7.641 107.100 1.00101.13 C
ATOM 12 O2' G A 21 60.632 7.088 106.032 1.00101.56 O
ATOM 13 C1' G A 21 60.569 8.772 107.748 1.00 98.11 C
ATOM 14 N9 G A 21 61.360 9.878 108.287 1.00 94.57 N
ATOM 15 C8 G A 21 61.915 9.960 109.542 1.00 93.64 C
ATOM 16 N7 G A 21 62.507 11.101 109.768 1.00 92.57 N
ATOM 17 C5 G A 21 62.345 11.812 108.587 1.00 91.04 C
ATOM 18 C6 G A 21 62.754 13.119 108.246 1.00 89.05 C
ATOM 19 O6 G A 21 63.342 13.947 108.945 1.00 87.95 O
ATOM 20 N1 G A 21 62.397 13.441 106.946 1.00 88.31 N
ATOM 21 C2 G A 21 61.722 12.616 106.088 1.00 88.84 C
ATOM 22 N2 G A 21 61.471 13.109 104.872 1.00 89.39 N
ATOM 23 N3 G A 21 61.320 11.400 106.396 1.00 89.99 N
ATOM 24 C4 G A 21 61.661 11.063 107.654 1.00 91.91 C
ATOM 25 P U A 22 62.927 4.468 108.381 1.00118.45 P
ATOM 26 OP1 U A 22 63.196 4.885 109.790 1.00117.34 O
ATOM 27 OP2 U A 22 64.014 4.562 107.366 1.00118.15 O
ATOM 28 O5' U A 22 62.383 2.967 108.386 1.00121.82 O
TER
ATOM 1 O3' G B 24 59.961 6.371 96.637 1.00 95.80 O
ATOM 2 P C B 25 61.278 7.285 96.751 1.00 91.15 P
ATOM 3 OP1 C B 25 61.816 7.441 95.379 1.00 91.91 O
ATOM 4 OP2 C B 25 62.156 6.755 97.823 1.00 91.79 O
ATOM 5 O5' C B 25 60.713 8.692 97.229 1.00 88.48 O
ATOM 6 C5' C B 25 59.752 9.402 96.430 1.00 83.91 C
ATOM 7 C4' C B 25 59.465 10.757 97.031 1.00 80.38 C
ATOM 8 O4' C B 25 58.768 10.608 98.296 1.00 79.41 O
ATOM 9 C3' C B 25 60.678 11.597 97.384 1.00 78.76 C
ATOM 10 O3' C B 25 61.219 12.240 96.237 1.00 76.85 O
ATOM 11 C2' C B 25 60.096 12.582 98.388 1.00 78.91 C
ATOM 12 O2' C B 25 59.374 13.630 97.768 1.00 79.11 O
ATOM 13 C1' C B 25 59.125 11.679 99.160 1.00 78.30 C
ATOM 14 N1 C B 25 59.695 11.127 100.409 1.00 75.74 N
ATOM 15 C2 C B 25 59.887 11.986 101.497 1.00 75.16 C
ATOM 16 O2 C B 25 59.564 13.180 101.390 1.00 75.74 O
ATOM 17 N3 C B 25 60.420 11.498 102.636 1.00 73.90 N
ATOM 18 C4 C B 25 60.754 10.212 102.717 1.00 72.76 C
ATOM 19 N4 C B 25 61.282 9.780 103.860 1.00 73.18 N
ATOM 20 C5 C B 25 60.565 9.315 101.632 1.00 71.99 C
ATOM 21 C6 C B 25 60.037 9.808 100.509 1.00 73.64 C
ATOM 22 P C B 26 62.771 12.640 96.209 1.00 73.44 P
ATOM 23 OP1 C B 26 63.023 13.243 94.872 1.00 73.56 O
ATOM 24 OP2 C B 26 63.577 11.476 96.654 1.00 72.95 O
ATOM 25 O5' C B 26 62.870 13.767 97.326 1.00 72.21 O
TER
Atoms:
OP1: (58.926,6.745,113.640)
OP2: (60.722,8.323,112.705)
C3': (61.517,6.673,108.265)
C1': (60.569,8.772,107.748)
C5': (60.327,6.518,110.475)
O6: (63.342,13.947,108.945)
O4': (59.821,8.211,108.816)
C8: (61.915,9.960,109.542)
C2: (61.722,12.616,106.088)
C6: (62.754,13.119,108.246)
C5: (62.345,11.812,108.587)
C4: (61.661,11.063,107.654)
P: (59.362,7.717,112.608)
C4': (60.202,6.827,109.004)
C2': (61.372,7.641,107.100)
O2': (60.632,7.088,106.032)
N1: (62.397,13.441,106.946)
N2: (61.471,13.109,104.872)
N3: (61.320,11.400,106.396)
N7: (62.507,11.101,109.768)
N9: (61.360,9.878,108.287)
O5': (59.194,7.022,111.184)
O3': (61.679,5.325,107.848)
OP2: (60.722,8.323,112.705)
C3': (61.517,6.673,108.265)
C1': (60.569,8.772,107.748)
C5': (60.327,6.518,110.475)
O6: (63.342,13.947,108.945)
O4': (59.821,8.211,108.816)
C8: (61.915,9.960,109.542)
C2: (61.722,12.616,106.088)
C6: (62.754,13.119,108.246)
C5: (62.345,11.812,108.587)
C4: (61.661,11.063,107.654)
P: (59.362,7.717,112.608)
C4': (60.202,6.827,109.004)
C2': (61.372,7.641,107.100)
O2': (60.632,7.088,106.032)
N1: (62.397,13.441,106.946)
N2: (61.471,13.109,104.872)
N3: (61.320,11.400,106.396)
N7: (62.507,11.101,109.768)
N9: (61.360,9.878,108.287)
O5': (59.194,7.022,111.184)
O3': (61.679,5.325,107.848)
C2: (59.887,11.986,101.497)
OP1: (61.816,7.441,95.379)
OP2: (62.156,6.755,97.823)
C4: (60.754,10.212,102.717)
O5': (60.713,8.692,97.229)
C3': (60.678,11.597,97.384)
C1': (59.125,11.679,99.160)
O4': (58.768,10.608,98.296)
C5': (59.752,9.402,96.430)
P: (61.278,7.285,96.751)
O2: (59.564,13.180,101.390)
C4': (59.465,10.757,97.031)
C2': (60.096,12.582,98.388)
O2': (59.374,13.630,97.768)
N1: (59.695,11.127,100.409)
N3: (60.420,11.498,102.636)
N4: (61.282,9.780,103.860)
C6: (60.037,9.808,100.509)
C5: (60.565,9.315,101.632)
O3': (61.219,12.240,96.237)
OP1: (61.816,7.441,95.379)
OP2: (62.156,6.755,97.823)
C4: (60.754,10.212,102.717)
O5': (60.713,8.692,97.229)
C3': (60.678,11.597,97.384)
C1': (59.125,11.679,99.160)
O4': (58.768,10.608,98.296)
C5': (59.752,9.402,96.430)
P: (61.278,7.285,96.751)
O2: (59.564,13.180,101.390)
C4': (59.465,10.757,97.031)
C2': (60.096,12.582,98.388)
O2': (59.374,13.630,97.768)
N1: (59.695,11.127,100.409)
N3: (60.420,11.498,102.636)
N4: (61.282,9.780,103.860)
C6: (60.037,9.808,100.509)
C5: (60.565,9.315,101.632)
O3': (61.219,12.240,96.237)
Image (generated by PyMOL):