Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1104:A1124
Extra
PDB:
ATOM 1 O3' U A1103 -113.669 115.733 44.409 1.00 81.64 O
ATOM 2 P G A1104 -114.501 117.096 44.175 1.00109.80 P
ATOM 3 OP1 G A1104 -114.430 117.878 45.435 1.00195.56 O
ATOM 4 OP2 G A1104 -115.829 116.731 43.613 1.00195.56 O
ATOM 5 O5' G A1104 -113.691 117.897 43.057 1.00 45.66 O
ATOM 6 C5' G A1104 -112.436 118.530 43.353 1.00 45.66 C
ATOM 7 C4' G A1104 -111.784 119.031 42.080 1.00 45.66 C
ATOM 8 O4' G A1104 -111.538 117.911 41.191 1.00 45.66 O
ATOM 9 C3' G A1104 -112.590 120.026 41.249 1.00 45.66 C
ATOM 10 O3' G A1104 -112.399 121.371 41.698 1.00 45.66 O
ATOM 11 C2' G A1104 -112.032 119.822 39.842 1.00 45.66 C
ATOM 12 O2' G A1104 -110.850 120.562 39.603 1.00 45.66 O
ATOM 13 C1' G A1104 -111.710 118.324 39.844 1.00 45.66 C
ATOM 14 N9 G A1104 -112.759 117.502 39.241 1.00140.01 N
ATOM 15 C8 G A1104 -114.037 117.304 39.713 1.00140.01 C
ATOM 16 N7 G A1104 -114.744 116.507 38.959 1.00140.01 N
ATOM 17 C5 G A1104 -113.884 116.158 37.927 1.00140.01 C
ATOM 18 C6 G A1104 -114.088 115.311 36.807 1.00140.01 C
ATOM 19 O6 G A1104 -115.101 114.676 36.495 1.00140.01 O
ATOM 20 N1 G A1104 -112.952 115.236 36.009 1.00140.01 N
ATOM 21 C2 G A1104 -111.771 115.889 36.253 1.00140.01 C
ATOM 22 N2 G A1104 -110.789 115.688 35.363 1.00140.01 N
ATOM 23 N3 G A1104 -111.566 116.677 37.294 1.00140.01 N
ATOM 24 C4 G A1104 -112.657 116.766 38.084 1.00140.01 C
ATOM 25 P C A1105 -113.660 122.245 42.184 1.00 91.32 P
ATOM 26 OP1 C A1105 -113.205 123.017 43.369 1.00 89.08 O
ATOM 27 OP2 C A1105 -114.864 121.374 42.301 1.00 89.08 O
ATOM 28 O5' C A1105 -113.880 123.278 40.990 1.00126.49 O
TER
ATOM 1 O3' A B1123 -105.542 120.691 29.381 1.00166.21 O
ATOM 2 P C B1124 -104.478 120.440 30.563 1.00198.48 P
ATOM 3 OP1 C B1124 -103.142 120.880 30.072 1.00171.25 O
ATOM 4 OP2 C B1124 -104.654 119.057 31.076 1.00171.25 O
ATOM 5 O5' C B1124 -104.942 121.459 31.693 1.00 76.89 O
ATOM 6 C5' C B1124 -104.697 121.193 33.075 1.00 76.89 C
ATOM 7 C4' C B1124 -105.163 122.357 33.916 1.00 76.89 C
ATOM 8 O4' C B1124 -106.608 122.458 33.863 1.00 76.89 O
ATOM 9 C3' C B1124 -104.838 122.217 35.389 1.00 76.89 C
ATOM 10 O3' C B1124 -103.518 122.679 35.637 1.00 76.89 O
ATOM 11 C2' C B1124 -105.913 123.060 36.065 1.00 76.89 C
ATOM 12 O2' C B1124 -105.612 124.438 36.134 1.00 76.89 O
ATOM 13 C1' C B1124 -107.106 122.853 35.129 1.00 76.89 C
ATOM 14 N1 C B1124 -108.056 121.828 35.595 1.00 36.04 N
ATOM 15 C2 C B1124 -108.653 121.971 36.861 1.00 36.04 C
ATOM 16 O2 C B1124 -108.347 122.937 37.571 1.00 36.04 O
ATOM 17 N3 C B1124 -109.545 121.053 37.278 1.00 36.04 N
ATOM 18 C4 C B1124 -109.856 120.018 36.492 1.00 36.04 C
ATOM 19 N4 C B1124 -110.769 119.145 36.941 1.00 36.04 N
ATOM 20 C5 C B1124 -109.251 119.835 35.209 1.00 36.04 C
ATOM 21 C6 C B1124 -108.365 120.754 34.806 1.00 36.04 C
ATOM 22 P U B1125 -102.462 121.702 36.345 1.00 58.40 P
ATOM 23 OP1 U B1125 -101.250 122.500 36.667 1.00100.59 O
ATOM 24 OP2 U B1125 -102.334 120.484 35.509 1.00 99.86 O
ATOM 25 O5' U B1125 -103.212 121.304 37.694 1.00 42.01 O
TER
ATOM 2 P G A1104 -114.501 117.096 44.175 1.00109.80 P
ATOM 3 OP1 G A1104 -114.430 117.878 45.435 1.00195.56 O
ATOM 4 OP2 G A1104 -115.829 116.731 43.613 1.00195.56 O
ATOM 5 O5' G A1104 -113.691 117.897 43.057 1.00 45.66 O
ATOM 6 C5' G A1104 -112.436 118.530 43.353 1.00 45.66 C
ATOM 7 C4' G A1104 -111.784 119.031 42.080 1.00 45.66 C
ATOM 8 O4' G A1104 -111.538 117.911 41.191 1.00 45.66 O
ATOM 9 C3' G A1104 -112.590 120.026 41.249 1.00 45.66 C
ATOM 10 O3' G A1104 -112.399 121.371 41.698 1.00 45.66 O
ATOM 11 C2' G A1104 -112.032 119.822 39.842 1.00 45.66 C
ATOM 12 O2' G A1104 -110.850 120.562 39.603 1.00 45.66 O
ATOM 13 C1' G A1104 -111.710 118.324 39.844 1.00 45.66 C
ATOM 14 N9 G A1104 -112.759 117.502 39.241 1.00140.01 N
ATOM 15 C8 G A1104 -114.037 117.304 39.713 1.00140.01 C
ATOM 16 N7 G A1104 -114.744 116.507 38.959 1.00140.01 N
ATOM 17 C5 G A1104 -113.884 116.158 37.927 1.00140.01 C
ATOM 18 C6 G A1104 -114.088 115.311 36.807 1.00140.01 C
ATOM 19 O6 G A1104 -115.101 114.676 36.495 1.00140.01 O
ATOM 20 N1 G A1104 -112.952 115.236 36.009 1.00140.01 N
ATOM 21 C2 G A1104 -111.771 115.889 36.253 1.00140.01 C
ATOM 22 N2 G A1104 -110.789 115.688 35.363 1.00140.01 N
ATOM 23 N3 G A1104 -111.566 116.677 37.294 1.00140.01 N
ATOM 24 C4 G A1104 -112.657 116.766 38.084 1.00140.01 C
ATOM 25 P C A1105 -113.660 122.245 42.184 1.00 91.32 P
ATOM 26 OP1 C A1105 -113.205 123.017 43.369 1.00 89.08 O
ATOM 27 OP2 C A1105 -114.864 121.374 42.301 1.00 89.08 O
ATOM 28 O5' C A1105 -113.880 123.278 40.990 1.00126.49 O
TER
ATOM 1 O3' A B1123 -105.542 120.691 29.381 1.00166.21 O
ATOM 2 P C B1124 -104.478 120.440 30.563 1.00198.48 P
ATOM 3 OP1 C B1124 -103.142 120.880 30.072 1.00171.25 O
ATOM 4 OP2 C B1124 -104.654 119.057 31.076 1.00171.25 O
ATOM 5 O5' C B1124 -104.942 121.459 31.693 1.00 76.89 O
ATOM 6 C5' C B1124 -104.697 121.193 33.075 1.00 76.89 C
ATOM 7 C4' C B1124 -105.163 122.357 33.916 1.00 76.89 C
ATOM 8 O4' C B1124 -106.608 122.458 33.863 1.00 76.89 O
ATOM 9 C3' C B1124 -104.838 122.217 35.389 1.00 76.89 C
ATOM 10 O3' C B1124 -103.518 122.679 35.637 1.00 76.89 O
ATOM 11 C2' C B1124 -105.913 123.060 36.065 1.00 76.89 C
ATOM 12 O2' C B1124 -105.612 124.438 36.134 1.00 76.89 O
ATOM 13 C1' C B1124 -107.106 122.853 35.129 1.00 76.89 C
ATOM 14 N1 C B1124 -108.056 121.828 35.595 1.00 36.04 N
ATOM 15 C2 C B1124 -108.653 121.971 36.861 1.00 36.04 C
ATOM 16 O2 C B1124 -108.347 122.937 37.571 1.00 36.04 O
ATOM 17 N3 C B1124 -109.545 121.053 37.278 1.00 36.04 N
ATOM 18 C4 C B1124 -109.856 120.018 36.492 1.00 36.04 C
ATOM 19 N4 C B1124 -110.769 119.145 36.941 1.00 36.04 N
ATOM 20 C5 C B1124 -109.251 119.835 35.209 1.00 36.04 C
ATOM 21 C6 C B1124 -108.365 120.754 34.806 1.00 36.04 C
ATOM 22 P U B1125 -102.462 121.702 36.345 1.00 58.40 P
ATOM 23 OP1 U B1125 -101.250 122.500 36.667 1.00100.59 O
ATOM 24 OP2 U B1125 -102.334 120.484 35.509 1.00 99.86 O
ATOM 25 O5' U B1125 -103.212 121.304 37.694 1.00 42.01 O
TER
Atoms:
OP1: (-114.430,117.878,45.435)
OP2: (-115.829,116.731,43.613)
C3': (-112.590,120.026,41.249)
C1': (-111.710,118.324,39.844)
C5': (-112.436,118.530,43.353)
O6: (-115.101,114.676,36.495)
O4': (-111.538,117.911,41.191)
C8: (-114.037,117.304,39.713)
C2: (-111.771,115.889,36.253)
C6: (-114.088,115.311,36.807)
C5: (-113.884,116.158,37.927)
C4: (-112.657,116.766,38.084)
P: (-114.501,117.096,44.175)
C4': (-111.784,119.031,42.080)
C2': (-112.032,119.822,39.842)
O2': (-110.850,120.562,39.603)
N1: (-112.952,115.236,36.009)
N2: (-110.789,115.688,35.363)
N3: (-111.566,116.677,37.294)
N7: (-114.744,116.507,38.959)
N9: (-112.759,117.502,39.241)
O5': (-113.691,117.897,43.057)
O3': (-112.399,121.371,41.698)
OP2: (-115.829,116.731,43.613)
C3': (-112.590,120.026,41.249)
C1': (-111.710,118.324,39.844)
C5': (-112.436,118.530,43.353)
O6: (-115.101,114.676,36.495)
O4': (-111.538,117.911,41.191)
C8: (-114.037,117.304,39.713)
C2: (-111.771,115.889,36.253)
C6: (-114.088,115.311,36.807)
C5: (-113.884,116.158,37.927)
C4: (-112.657,116.766,38.084)
P: (-114.501,117.096,44.175)
C4': (-111.784,119.031,42.080)
C2': (-112.032,119.822,39.842)
O2': (-110.850,120.562,39.603)
N1: (-112.952,115.236,36.009)
N2: (-110.789,115.688,35.363)
N3: (-111.566,116.677,37.294)
N7: (-114.744,116.507,38.959)
N9: (-112.759,117.502,39.241)
O5': (-113.691,117.897,43.057)
O3': (-112.399,121.371,41.698)
C2: (-108.653,121.971,36.861)
OP1: (-103.142,120.880,30.072)
OP2: (-104.654,119.057,31.076)
C4: (-109.856,120.018,36.492)
O5': (-104.942,121.459,31.693)
C3': (-104.838,122.217,35.389)
C1': (-107.106,122.853,35.129)
O4': (-106.608,122.458,33.863)
C5': (-104.697,121.193,33.075)
P: (-104.478,120.440,30.563)
O2: (-108.347,122.937,37.571)
C4': (-105.163,122.357,33.916)
C2': (-105.913,123.060,36.065)
O2': (-105.612,124.438,36.134)
N1: (-108.056,121.828,35.595)
N3: (-109.545,121.053,37.278)
N4: (-110.769,119.145,36.941)
C6: (-108.365,120.754,34.806)
C5: (-109.251,119.835,35.209)
O3': (-103.518,122.679,35.637)
OP1: (-103.142,120.880,30.072)
OP2: (-104.654,119.057,31.076)
C4: (-109.856,120.018,36.492)
O5': (-104.942,121.459,31.693)
C3': (-104.838,122.217,35.389)
C1': (-107.106,122.853,35.129)
O4': (-106.608,122.458,33.863)
C5': (-104.697,121.193,33.075)
P: (-104.478,120.440,30.563)
O2: (-108.347,122.937,37.571)
C4': (-105.163,122.357,33.916)
C2': (-105.913,123.060,36.065)
O2': (-105.612,124.438,36.134)
N1: (-108.056,121.828,35.595)
N3: (-109.545,121.053,37.278)
N4: (-110.769,119.145,36.941)
C6: (-108.365,120.754,34.806)
C5: (-109.251,119.835,35.209)
O3': (-103.518,122.679,35.637)
Image (generated by PyMOL):