Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BOY:D13:D12
Extra
PDB:
ATOM 1 O3' U A 12 10.414 16.227 17.841 1.00 64.57 O
ATOM 2 P U A 13 11.024 15.181 16.802 1.00 66.17 P
ATOM 3 OP1 U A 13 10.487 13.843 17.145 1.00 66.00 O
ATOM 4 OP2 U A 13 12.482 15.422 16.690 1.00 66.06 O
ATOM 5 O5' U A 13 10.390 15.644 15.407 1.00 66.80 O
ATOM 6 C5' U A 13 9.642 16.854 15.268 1.00 65.43 C
ATOM 7 C4' U A 13 8.181 16.464 15.286 1.00 63.75 C
ATOM 8 O4' U A 13 7.822 16.042 16.623 1.00 62.18 O
ATOM 9 C3' U A 13 7.135 17.536 15.033 1.00 63.50 C
ATOM 10 O3' U A 13 7.106 18.121 13.690 1.00 64.96 O
ATOM 11 C2' U A 13 5.904 16.728 15.456 1.00 62.71 C
ATOM 12 O2' U A 13 5.561 15.687 14.558 1.00 64.16 O
ATOM 13 C1' U A 13 6.409 16.080 16.744 1.00 58.38 C
ATOM 14 N1 U A 13 5.975 16.600 18.122 1.00 56.41 N
ATOM 15 C2 U A 13 4.770 17.269 18.394 1.00 55.02 C
ATOM 16 O2 U A 13 3.909 17.562 17.581 1.00 53.87 O
ATOM 17 N3 U A 13 4.584 17.610 19.719 1.00 54.48 N
ATOM 18 C4 U A 13 5.436 17.360 20.790 1.00 55.24 C
ATOM 19 O4 U A 13 5.134 17.725 21.919 1.00 54.95 O
ATOM 20 C5 U A 13 6.650 16.668 20.442 1.00 54.61 C
ATOM 21 C6 U A 13 6.850 16.322 19.162 1.00 55.54 C
ATOM 22 P U A 14 6.936 17.411 12.248 1.00 65.41 P
ATOM 23 OP1 U A 14 7.824 16.228 12.150 1.00 65.58 O
ATOM 24 OP2 U A 14 7.077 18.488 11.240 1.00 66.38 O
ATOM 25 O5' U A 14 5.397 16.963 12.226 1.00 66.87 O
TER
ATOM 1 O3' G B 11 11.822 14.575 24.071 1.00 36.49 O
ATOM 2 P U B 12 12.220 13.957 22.662 1.00 40.59 P
ATOM 3 OP1 U B 12 11.418 12.725 22.408 1.00 44.69 O
ATOM 4 OP2 U B 12 13.674 13.795 22.629 1.00 45.09 O
ATOM 5 O5' U B 12 11.796 15.140 21.697 1.00 45.51 O
ATOM 6 C5' U B 12 10.589 14.951 20.967 1.00 54.16 C
ATOM 7 C4' U B 12 10.145 16.170 20.176 1.00 59.90 C
ATOM 8 O4' U B 12 9.965 17.308 21.048 1.00 61.38 O
ATOM 9 C3' U B 12 11.075 16.575 19.041 1.00 62.87 C
ATOM 10 O3' U B 12 10.414 16.227 17.841 1.00 64.57 O
ATOM 11 C2' U B 12 11.249 18.090 19.165 1.00 64.21 C
ATOM 12 O2' U B 12 10.664 18.805 18.086 1.00 65.68 O
ATOM 13 C1' U B 12 10.556 18.463 20.479 1.00 65.00 C
ATOM 14 N1 U B 12 11.494 19.035 21.503 1.00 66.60 N
ATOM 15 C2 U B 12 11.553 20.408 21.715 1.00 66.96 C
ATOM 16 O2 U B 12 10.883 21.231 21.110 1.00 67.22 O
ATOM 17 N3 U B 12 12.452 20.784 22.688 1.00 67.40 N
ATOM 18 C4 U B 12 13.275 19.958 23.446 1.00 66.63 C
ATOM 19 O4 U B 12 14.026 20.447 24.277 1.00 66.70 O
ATOM 20 C5 U B 12 13.155 18.550 23.178 1.00 67.34 C
ATOM 21 C6 U B 12 12.285 18.158 22.239 1.00 67.05 C
ATOM 22 P U B 13 11.024 15.181 16.802 1.00 66.17 P
ATOM 23 OP1 U B 13 10.487 13.843 17.145 1.00 66.00 O
ATOM 24 OP2 U B 13 12.482 15.422 16.690 1.00 66.06 O
ATOM 25 O5' U B 13 10.390 15.644 15.407 1.00 66.80 O
TER
ATOM 2 P U A 13 11.024 15.181 16.802 1.00 66.17 P
ATOM 3 OP1 U A 13 10.487 13.843 17.145 1.00 66.00 O
ATOM 4 OP2 U A 13 12.482 15.422 16.690 1.00 66.06 O
ATOM 5 O5' U A 13 10.390 15.644 15.407 1.00 66.80 O
ATOM 6 C5' U A 13 9.642 16.854 15.268 1.00 65.43 C
ATOM 7 C4' U A 13 8.181 16.464 15.286 1.00 63.75 C
ATOM 8 O4' U A 13 7.822 16.042 16.623 1.00 62.18 O
ATOM 9 C3' U A 13 7.135 17.536 15.033 1.00 63.50 C
ATOM 10 O3' U A 13 7.106 18.121 13.690 1.00 64.96 O
ATOM 11 C2' U A 13 5.904 16.728 15.456 1.00 62.71 C
ATOM 12 O2' U A 13 5.561 15.687 14.558 1.00 64.16 O
ATOM 13 C1' U A 13 6.409 16.080 16.744 1.00 58.38 C
ATOM 14 N1 U A 13 5.975 16.600 18.122 1.00 56.41 N
ATOM 15 C2 U A 13 4.770 17.269 18.394 1.00 55.02 C
ATOM 16 O2 U A 13 3.909 17.562 17.581 1.00 53.87 O
ATOM 17 N3 U A 13 4.584 17.610 19.719 1.00 54.48 N
ATOM 18 C4 U A 13 5.436 17.360 20.790 1.00 55.24 C
ATOM 19 O4 U A 13 5.134 17.725 21.919 1.00 54.95 O
ATOM 20 C5 U A 13 6.650 16.668 20.442 1.00 54.61 C
ATOM 21 C6 U A 13 6.850 16.322 19.162 1.00 55.54 C
ATOM 22 P U A 14 6.936 17.411 12.248 1.00 65.41 P
ATOM 23 OP1 U A 14 7.824 16.228 12.150 1.00 65.58 O
ATOM 24 OP2 U A 14 7.077 18.488 11.240 1.00 66.38 O
ATOM 25 O5' U A 14 5.397 16.963 12.226 1.00 66.87 O
TER
ATOM 1 O3' G B 11 11.822 14.575 24.071 1.00 36.49 O
ATOM 2 P U B 12 12.220 13.957 22.662 1.00 40.59 P
ATOM 3 OP1 U B 12 11.418 12.725 22.408 1.00 44.69 O
ATOM 4 OP2 U B 12 13.674 13.795 22.629 1.00 45.09 O
ATOM 5 O5' U B 12 11.796 15.140 21.697 1.00 45.51 O
ATOM 6 C5' U B 12 10.589 14.951 20.967 1.00 54.16 C
ATOM 7 C4' U B 12 10.145 16.170 20.176 1.00 59.90 C
ATOM 8 O4' U B 12 9.965 17.308 21.048 1.00 61.38 O
ATOM 9 C3' U B 12 11.075 16.575 19.041 1.00 62.87 C
ATOM 10 O3' U B 12 10.414 16.227 17.841 1.00 64.57 O
ATOM 11 C2' U B 12 11.249 18.090 19.165 1.00 64.21 C
ATOM 12 O2' U B 12 10.664 18.805 18.086 1.00 65.68 O
ATOM 13 C1' U B 12 10.556 18.463 20.479 1.00 65.00 C
ATOM 14 N1 U B 12 11.494 19.035 21.503 1.00 66.60 N
ATOM 15 C2 U B 12 11.553 20.408 21.715 1.00 66.96 C
ATOM 16 O2 U B 12 10.883 21.231 21.110 1.00 67.22 O
ATOM 17 N3 U B 12 12.452 20.784 22.688 1.00 67.40 N
ATOM 18 C4 U B 12 13.275 19.958 23.446 1.00 66.63 C
ATOM 19 O4 U B 12 14.026 20.447 24.277 1.00 66.70 O
ATOM 20 C5 U B 12 13.155 18.550 23.178 1.00 67.34 C
ATOM 21 C6 U B 12 12.285 18.158 22.239 1.00 67.05 C
ATOM 22 P U B 13 11.024 15.181 16.802 1.00 66.17 P
ATOM 23 OP1 U B 13 10.487 13.843 17.145 1.00 66.00 O
ATOM 24 OP2 U B 13 12.482 15.422 16.690 1.00 66.06 O
ATOM 25 O5' U B 13 10.390 15.644 15.407 1.00 66.80 O
TER
Atoms:
C4: (5.436,17.360,20.790)
N3: (4.584,17.610,19.719)
OP1: (10.487,13.843,17.145)
OP2: (12.482,15.422,16.690)
C2: (4.770,17.269,18.394)
C1': (6.409,16.080,16.744)
C3': (7.135,17.536,15.033)
O5': (10.390,15.644,15.407)
O4': (7.822,16.042,16.623)
C5': (9.642,16.854,15.268)
P: (11.024,15.181,16.802)
C4': (8.181,16.464,15.286)
C2': (5.904,16.728,15.456)
O2': (5.561,15.687,14.558)
N1: (5.975,16.600,18.122)
O4: (5.134,17.725,21.919)
O2: (3.909,17.562,17.581)
C6: (6.850,16.322,19.162)
C5: (6.650,16.668,20.442)
O3': (7.106,18.121,13.690)
N3: (4.584,17.610,19.719)
OP1: (10.487,13.843,17.145)
OP2: (12.482,15.422,16.690)
C2: (4.770,17.269,18.394)
C1': (6.409,16.080,16.744)
C3': (7.135,17.536,15.033)
O5': (10.390,15.644,15.407)
O4': (7.822,16.042,16.623)
C5': (9.642,16.854,15.268)
P: (11.024,15.181,16.802)
C4': (8.181,16.464,15.286)
C2': (5.904,16.728,15.456)
O2': (5.561,15.687,14.558)
N1: (5.975,16.600,18.122)
O4: (5.134,17.725,21.919)
O2: (3.909,17.562,17.581)
C6: (6.850,16.322,19.162)
C5: (6.650,16.668,20.442)
O3': (7.106,18.121,13.690)
C4: (13.275,19.958,23.446)
N3: (12.452,20.784,22.688)
OP1: (11.418,12.725,22.408)
OP2: (13.674,13.795,22.629)
C2: (11.553,20.408,21.715)
C1': (10.556,18.463,20.479)
C3': (11.075,16.575,19.041)
O5': (11.796,15.140,21.697)
O4': (9.965,17.308,21.048)
C5': (10.589,14.951,20.967)
P: (12.220,13.957,22.662)
C4': (10.145,16.170,20.176)
C2': (11.249,18.090,19.165)
O2': (10.664,18.805,18.086)
N1: (11.494,19.035,21.503)
O4: (14.026,20.447,24.277)
O2: (10.883,21.231,21.110)
C6: (12.285,18.158,22.239)
C5: (13.155,18.550,23.178)
O3': (10.414,16.227,17.841)
N3: (12.452,20.784,22.688)
OP1: (11.418,12.725,22.408)
OP2: (13.674,13.795,22.629)
C2: (11.553,20.408,21.715)
C1': (10.556,18.463,20.479)
C3': (11.075,16.575,19.041)
O5': (11.796,15.140,21.697)
O4': (9.965,17.308,21.048)
C5': (10.589,14.951,20.967)
P: (12.220,13.957,22.662)
C4': (10.145,16.170,20.176)
C2': (11.249,18.090,19.165)
O2': (10.664,18.805,18.086)
N1: (11.494,19.035,21.503)
O4: (14.026,20.447,24.277)
O2: (10.883,21.231,21.110)
C6: (12.285,18.158,22.239)
C5: (13.155,18.550,23.178)
O3': (10.414,16.227,17.841)
Image (generated by PyMOL):