Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BOY:D6:D5
Extra
PDB:
ATOM 1 O3' U A 5 17.723 -6.835 32.327 1.00 60.43 O
ATOM 2 P U A 6 18.046 -5.578 31.402 1.00 61.30 P
ATOM 3 OP1 U A 6 17.184 -5.636 30.199 1.00 61.92 O
ATOM 4 OP2 U A 6 19.518 -5.497 31.257 1.00 60.94 O
ATOM 5 O5' U A 6 17.539 -4.358 32.307 1.00 60.18 O
ATOM 6 C5' U A 6 18.224 -3.998 33.501 1.00 58.27 C
ATOM 7 C4' U A 6 17.256 -3.501 34.555 1.00 56.38 C
ATOM 8 O4' U A 6 15.946 -4.078 34.303 1.00 52.65 O
ATOM 9 C3' U A 6 17.636 -3.936 35.969 1.00 56.13 C
ATOM 10 O3' U A 6 18.535 -3.054 36.719 1.00 58.75 O
ATOM 11 C2' U A 6 16.288 -4.074 36.666 1.00 55.00 C
ATOM 12 O2' U A 6 15.937 -2.883 37.357 1.00 56.26 O
ATOM 13 C1' U A 6 15.273 -4.234 35.530 1.00 49.45 C
ATOM 14 N1 U A 6 14.386 -5.453 35.561 1.00 46.09 N
ATOM 15 C2 U A 6 13.471 -5.575 36.602 1.00 44.58 C
ATOM 16 O2 U A 6 13.361 -4.766 37.508 1.00 42.86 O
ATOM 17 N3 U A 6 12.670 -6.692 36.555 1.00 43.89 N
ATOM 18 C4 U A 6 12.679 -7.682 35.579 1.00 45.51 C
ATOM 19 O4 U A 6 11.898 -8.618 35.676 1.00 43.97 O
ATOM 20 C5 U A 6 13.652 -7.488 34.519 1.00 44.80 C
ATOM 21 C6 U A 6 14.448 -6.402 34.548 1.00 45.08 C
ATOM 22 P U A 7 18.830 -1.480 36.543 1.00 59.11 P
ATOM 23 OP1 U A 7 19.025 -1.162 35.110 1.00 59.67 O
ATOM 24 OP2 U A 7 19.934 -1.195 37.492 1.00 61.46 O
ATOM 25 O5' U A 7 17.519 -0.756 37.133 1.00 60.84 O
TER
ATOM 1 O3' G B 4 14.267 -11.389 28.978 1.00 35.18 O
ATOM 2 P U B 5 15.156 -10.127 28.588 1.00 40.94 P
ATOM 3 OP1 U B 5 14.197 -9.018 28.334 1.00 46.35 O
ATOM 4 OP2 U B 5 16.056 -10.466 27.474 1.00 45.05 O
ATOM 5 O5' U B 5 15.976 -9.848 29.912 1.00 44.56 O
ATOM 6 C5' U B 5 15.287 -9.051 30.876 1.00 52.60 C
ATOM 7 C4' U B 5 16.123 -8.586 32.057 1.00 57.14 C
ATOM 8 O4' U B 5 16.170 -9.651 33.028 1.00 59.10 O
ATOM 9 C3' U B 5 17.558 -8.135 31.775 1.00 59.63 C
ATOM 10 O3' U B 5 17.723 -6.835 32.327 1.00 60.43 O
ATOM 11 C2' U B 5 18.464 -9.153 32.474 1.00 60.59 C
ATOM 12 O2' U B 5 19.403 -8.557 33.358 1.00 60.95 O
ATOM 13 C1' U B 5 17.507 -10.055 33.262 1.00 61.97 C
ATOM 14 N1 U B 5 17.611 -11.508 32.906 1.00 63.33 N
ATOM 15 C2 U B 5 17.806 -12.432 33.923 1.00 63.97 C
ATOM 16 O2 U B 5 17.905 -12.148 35.106 1.00 64.03 O
ATOM 17 N3 U B 5 17.883 -13.732 33.486 1.00 64.33 N
ATOM 18 C4 U B 5 17.791 -14.187 32.179 1.00 63.54 C
ATOM 19 O4 U B 5 17.883 -15.387 31.975 1.00 63.53 O
ATOM 20 C5 U B 5 17.583 -13.176 31.169 1.00 64.15 C
ATOM 21 C6 U B 5 17.498 -11.902 31.575 1.00 63.86 C
ATOM 22 P U B 6 18.046 -5.578 31.402 1.00 61.30 P
ATOM 23 OP1 U B 6 17.184 -5.636 30.199 1.00 61.92 O
ATOM 24 OP2 U B 6 19.518 -5.497 31.257 1.00 60.94 O
ATOM 25 O5' U B 6 17.539 -4.358 32.307 1.00 60.18 O
TER
ATOM 2 P U A 6 18.046 -5.578 31.402 1.00 61.30 P
ATOM 3 OP1 U A 6 17.184 -5.636 30.199 1.00 61.92 O
ATOM 4 OP2 U A 6 19.518 -5.497 31.257 1.00 60.94 O
ATOM 5 O5' U A 6 17.539 -4.358 32.307 1.00 60.18 O
ATOM 6 C5' U A 6 18.224 -3.998 33.501 1.00 58.27 C
ATOM 7 C4' U A 6 17.256 -3.501 34.555 1.00 56.38 C
ATOM 8 O4' U A 6 15.946 -4.078 34.303 1.00 52.65 O
ATOM 9 C3' U A 6 17.636 -3.936 35.969 1.00 56.13 C
ATOM 10 O3' U A 6 18.535 -3.054 36.719 1.00 58.75 O
ATOM 11 C2' U A 6 16.288 -4.074 36.666 1.00 55.00 C
ATOM 12 O2' U A 6 15.937 -2.883 37.357 1.00 56.26 O
ATOM 13 C1' U A 6 15.273 -4.234 35.530 1.00 49.45 C
ATOM 14 N1 U A 6 14.386 -5.453 35.561 1.00 46.09 N
ATOM 15 C2 U A 6 13.471 -5.575 36.602 1.00 44.58 C
ATOM 16 O2 U A 6 13.361 -4.766 37.508 1.00 42.86 O
ATOM 17 N3 U A 6 12.670 -6.692 36.555 1.00 43.89 N
ATOM 18 C4 U A 6 12.679 -7.682 35.579 1.00 45.51 C
ATOM 19 O4 U A 6 11.898 -8.618 35.676 1.00 43.97 O
ATOM 20 C5 U A 6 13.652 -7.488 34.519 1.00 44.80 C
ATOM 21 C6 U A 6 14.448 -6.402 34.548 1.00 45.08 C
ATOM 22 P U A 7 18.830 -1.480 36.543 1.00 59.11 P
ATOM 23 OP1 U A 7 19.025 -1.162 35.110 1.00 59.67 O
ATOM 24 OP2 U A 7 19.934 -1.195 37.492 1.00 61.46 O
ATOM 25 O5' U A 7 17.519 -0.756 37.133 1.00 60.84 O
TER
ATOM 1 O3' G B 4 14.267 -11.389 28.978 1.00 35.18 O
ATOM 2 P U B 5 15.156 -10.127 28.588 1.00 40.94 P
ATOM 3 OP1 U B 5 14.197 -9.018 28.334 1.00 46.35 O
ATOM 4 OP2 U B 5 16.056 -10.466 27.474 1.00 45.05 O
ATOM 5 O5' U B 5 15.976 -9.848 29.912 1.00 44.56 O
ATOM 6 C5' U B 5 15.287 -9.051 30.876 1.00 52.60 C
ATOM 7 C4' U B 5 16.123 -8.586 32.057 1.00 57.14 C
ATOM 8 O4' U B 5 16.170 -9.651 33.028 1.00 59.10 O
ATOM 9 C3' U B 5 17.558 -8.135 31.775 1.00 59.63 C
ATOM 10 O3' U B 5 17.723 -6.835 32.327 1.00 60.43 O
ATOM 11 C2' U B 5 18.464 -9.153 32.474 1.00 60.59 C
ATOM 12 O2' U B 5 19.403 -8.557 33.358 1.00 60.95 O
ATOM 13 C1' U B 5 17.507 -10.055 33.262 1.00 61.97 C
ATOM 14 N1 U B 5 17.611 -11.508 32.906 1.00 63.33 N
ATOM 15 C2 U B 5 17.806 -12.432 33.923 1.00 63.97 C
ATOM 16 O2 U B 5 17.905 -12.148 35.106 1.00 64.03 O
ATOM 17 N3 U B 5 17.883 -13.732 33.486 1.00 64.33 N
ATOM 18 C4 U B 5 17.791 -14.187 32.179 1.00 63.54 C
ATOM 19 O4 U B 5 17.883 -15.387 31.975 1.00 63.53 O
ATOM 20 C5 U B 5 17.583 -13.176 31.169 1.00 64.15 C
ATOM 21 C6 U B 5 17.498 -11.902 31.575 1.00 63.86 C
ATOM 22 P U B 6 18.046 -5.578 31.402 1.00 61.30 P
ATOM 23 OP1 U B 6 17.184 -5.636 30.199 1.00 61.92 O
ATOM 24 OP2 U B 6 19.518 -5.497 31.257 1.00 60.94 O
ATOM 25 O5' U B 6 17.539 -4.358 32.307 1.00 60.18 O
TER
Atoms:
C4: (12.679,-7.682,35.579)
N3: (12.670,-6.692,36.555)
OP1: (17.184,-5.636,30.199)
OP2: (19.518,-5.497,31.257)
C2: (13.471,-5.575,36.602)
C1': (15.273,-4.234,35.530)
C3': (17.636,-3.936,35.969)
O5': (17.539,-4.358,32.307)
O4': (15.946,-4.078,34.303)
C5': (18.224,-3.998,33.501)
P: (18.046,-5.578,31.402)
C4': (17.256,-3.501,34.555)
C2': (16.288,-4.074,36.666)
O2': (15.937,-2.883,37.357)
N1: (14.386,-5.453,35.561)
O4: (11.898,-8.618,35.676)
O2: (13.361,-4.766,37.508)
C6: (14.448,-6.402,34.548)
C5: (13.652,-7.488,34.519)
O3': (18.535,-3.054,36.719)
N3: (12.670,-6.692,36.555)
OP1: (17.184,-5.636,30.199)
OP2: (19.518,-5.497,31.257)
C2: (13.471,-5.575,36.602)
C1': (15.273,-4.234,35.530)
C3': (17.636,-3.936,35.969)
O5': (17.539,-4.358,32.307)
O4': (15.946,-4.078,34.303)
C5': (18.224,-3.998,33.501)
P: (18.046,-5.578,31.402)
C4': (17.256,-3.501,34.555)
C2': (16.288,-4.074,36.666)
O2': (15.937,-2.883,37.357)
N1: (14.386,-5.453,35.561)
O4: (11.898,-8.618,35.676)
O2: (13.361,-4.766,37.508)
C6: (14.448,-6.402,34.548)
C5: (13.652,-7.488,34.519)
O3': (18.535,-3.054,36.719)
C4: (17.791,-14.187,32.179)
N3: (17.883,-13.732,33.486)
OP1: (14.197,-9.018,28.334)
OP2: (16.056,-10.466,27.474)
C2: (17.806,-12.432,33.923)
C1': (17.507,-10.055,33.262)
C3': (17.558,-8.135,31.775)
O5': (15.976,-9.848,29.912)
O4': (16.170,-9.651,33.028)
C5': (15.287,-9.051,30.876)
P: (15.156,-10.127,28.588)
C4': (16.123,-8.586,32.057)
C2': (18.464,-9.153,32.474)
O2': (19.403,-8.557,33.358)
N1: (17.611,-11.508,32.906)
O4: (17.883,-15.387,31.975)
O2: (17.905,-12.148,35.106)
C6: (17.498,-11.902,31.575)
C5: (17.583,-13.176,31.169)
O3': (17.723,-6.835,32.327)
N3: (17.883,-13.732,33.486)
OP1: (14.197,-9.018,28.334)
OP2: (16.056,-10.466,27.474)
C2: (17.806,-12.432,33.923)
C1': (17.507,-10.055,33.262)
C3': (17.558,-8.135,31.775)
O5': (15.976,-9.848,29.912)
O4': (16.170,-9.651,33.028)
C5': (15.287,-9.051,30.876)
P: (15.156,-10.127,28.588)
C4': (16.123,-8.586,32.057)
C2': (18.464,-9.153,32.474)
O2': (19.403,-8.557,33.358)
N1: (17.611,-11.508,32.906)
O4: (17.883,-15.387,31.975)
O2: (17.905,-12.148,35.106)
C6: (17.498,-11.902,31.575)
C5: (17.583,-13.176,31.169)
O3': (17.723,-6.835,32.327)
Image (generated by PyMOL):