Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B39:B38
Extra
PDB:
ATOM 1 O3' U A 38 -18.310 -54.362 14.304 1.00 62.31 O
ATOM 2 P U A 39 -18.768 -55.902 14.188 1.00 62.50 P
ATOM 3 OP1 U A 39 -18.090 -56.506 13.023 1.00 52.53 O
ATOM 4 OP2 U A 39 -20.248 -55.979 14.264 1.00 68.03 O
ATOM 5 O5' U A 39 -17.960 -56.431 15.479 1.00 55.31 O
ATOM 6 C5' U A 39 -16.638 -56.834 15.136 1.00 55.17 C
ATOM 7 C4' U A 39 -15.807 -56.523 16.336 1.00 58.19 C
ATOM 8 O4' U A 39 -16.149 -55.168 16.722 1.00 60.11 O
ATOM 9 C3' U A 39 -16.200 -57.358 17.543 1.00 59.71 C
ATOM 10 O3' U A 39 -15.064 -57.745 18.314 1.00 64.53 O
ATOM 11 C2' U A 39 -17.158 -56.452 18.289 1.00 58.88 C
ATOM 12 O2' U A 39 -17.318 -56.748 19.657 1.00 65.69 O
ATOM 13 C1' U A 39 -16.332 -55.186 18.121 1.00 57.67 C
ATOM 14 N1 U A 39 -17.026 -53.992 18.522 1.00 51.50 N
ATOM 15 C2 U A 39 -16.772 -53.520 19.783 1.00 51.91 C
ATOM 16 O2 U A 39 -16.004 -54.081 20.549 1.00 52.65 O
ATOM 17 N3 U A 39 -17.472 -52.417 20.118 1.00 51.48 N
ATOM 18 C4 U A 39 -18.364 -51.720 19.319 1.00 55.53 C
ATOM 19 O4 U A 39 -18.904 -50.681 19.752 1.00 63.27 O
ATOM 20 C5 U A 39 -18.572 -52.266 18.002 1.00 56.12 C
ATOM 21 C6 U A 39 -17.901 -53.368 17.661 1.00 57.80 C
ATOM 22 P U A 40 -14.903 -59.332 18.521 1.00 79.12 P
ATOM 23 OP1 U A 40 -16.232 -59.972 18.367 1.00 74.30 O
ATOM 24 OP2 U A 40 -14.106 -59.450 19.755 1.00 77.40 O
ATOM 25 O5' U A 40 -14.035 -59.835 17.275 1.00 73.96 O
TER
ATOM 1 O3' C B 37 -15.966 -51.676 9.403 1.00 55.29 O
ATOM 2 P U B 38 -16.511 -53.160 9.576 1.00 52.77 P
ATOM 3 OP1 U B 38 -15.359 -54.005 10.030 1.00 43.76 O
ATOM 4 OP2 U B 38 -17.180 -53.472 8.268 1.00 44.94 O
ATOM 5 O5' U B 38 -17.521 -53.031 10.780 1.00 50.41 O
ATOM 6 C5' U B 38 -16.857 -52.895 12.014 1.00 53.34 C
ATOM 7 C4' U B 38 -17.816 -52.396 13.079 1.00 53.81 C
ATOM 8 O4' U B 38 -18.627 -51.271 12.626 1.00 50.63 O
ATOM 9 C3' U B 38 -18.854 -53.453 13.416 1.00 57.03 C
ATOM 10 O3' U B 38 -18.310 -54.362 14.304 1.00 62.31 O
ATOM 11 C2' U B 38 -19.963 -52.681 14.106 1.00 60.37 C
ATOM 12 O2' U B 38 -19.644 -52.440 15.451 1.00 67.22 O
ATOM 13 C1' U B 38 -19.891 -51.390 13.309 1.00 55.56 C
ATOM 14 N1 U B 38 -20.959 -51.252 12.314 1.00 58.01 N
ATOM 15 C2 U B 38 -22.222 -50.879 12.739 1.00 58.30 C
ATOM 16 O2 U B 38 -22.526 -50.705 13.916 1.00 57.85 O
ATOM 17 N3 U B 38 -23.121 -50.733 11.709 1.00 54.82 N
ATOM 18 C4 U B 38 -22.867 -50.908 10.360 1.00 50.46 C
ATOM 19 O4 U B 38 -23.761 -50.718 9.541 1.00 51.99 O
ATOM 20 C5 U B 38 -21.522 -51.283 10.023 1.00 51.30 C
ATOM 21 C6 U B 38 -20.629 -51.448 10.992 1.00 53.77 C
ATOM 22 P U B 39 -18.768 -55.902 14.188 1.00 62.50 P
ATOM 23 OP1 U B 39 -18.090 -56.506 13.023 1.00 52.53 O
ATOM 24 OP2 U B 39 -20.248 -55.979 14.264 1.00 68.03 O
ATOM 25 O5' U B 39 -17.960 -56.431 15.479 1.00 55.31 O
TER
ATOM 2 P U A 39 -18.768 -55.902 14.188 1.00 62.50 P
ATOM 3 OP1 U A 39 -18.090 -56.506 13.023 1.00 52.53 O
ATOM 4 OP2 U A 39 -20.248 -55.979 14.264 1.00 68.03 O
ATOM 5 O5' U A 39 -17.960 -56.431 15.479 1.00 55.31 O
ATOM 6 C5' U A 39 -16.638 -56.834 15.136 1.00 55.17 C
ATOM 7 C4' U A 39 -15.807 -56.523 16.336 1.00 58.19 C
ATOM 8 O4' U A 39 -16.149 -55.168 16.722 1.00 60.11 O
ATOM 9 C3' U A 39 -16.200 -57.358 17.543 1.00 59.71 C
ATOM 10 O3' U A 39 -15.064 -57.745 18.314 1.00 64.53 O
ATOM 11 C2' U A 39 -17.158 -56.452 18.289 1.00 58.88 C
ATOM 12 O2' U A 39 -17.318 -56.748 19.657 1.00 65.69 O
ATOM 13 C1' U A 39 -16.332 -55.186 18.121 1.00 57.67 C
ATOM 14 N1 U A 39 -17.026 -53.992 18.522 1.00 51.50 N
ATOM 15 C2 U A 39 -16.772 -53.520 19.783 1.00 51.91 C
ATOM 16 O2 U A 39 -16.004 -54.081 20.549 1.00 52.65 O
ATOM 17 N3 U A 39 -17.472 -52.417 20.118 1.00 51.48 N
ATOM 18 C4 U A 39 -18.364 -51.720 19.319 1.00 55.53 C
ATOM 19 O4 U A 39 -18.904 -50.681 19.752 1.00 63.27 O
ATOM 20 C5 U A 39 -18.572 -52.266 18.002 1.00 56.12 C
ATOM 21 C6 U A 39 -17.901 -53.368 17.661 1.00 57.80 C
ATOM 22 P U A 40 -14.903 -59.332 18.521 1.00 79.12 P
ATOM 23 OP1 U A 40 -16.232 -59.972 18.367 1.00 74.30 O
ATOM 24 OP2 U A 40 -14.106 -59.450 19.755 1.00 77.40 O
ATOM 25 O5' U A 40 -14.035 -59.835 17.275 1.00 73.96 O
TER
ATOM 1 O3' C B 37 -15.966 -51.676 9.403 1.00 55.29 O
ATOM 2 P U B 38 -16.511 -53.160 9.576 1.00 52.77 P
ATOM 3 OP1 U B 38 -15.359 -54.005 10.030 1.00 43.76 O
ATOM 4 OP2 U B 38 -17.180 -53.472 8.268 1.00 44.94 O
ATOM 5 O5' U B 38 -17.521 -53.031 10.780 1.00 50.41 O
ATOM 6 C5' U B 38 -16.857 -52.895 12.014 1.00 53.34 C
ATOM 7 C4' U B 38 -17.816 -52.396 13.079 1.00 53.81 C
ATOM 8 O4' U B 38 -18.627 -51.271 12.626 1.00 50.63 O
ATOM 9 C3' U B 38 -18.854 -53.453 13.416 1.00 57.03 C
ATOM 10 O3' U B 38 -18.310 -54.362 14.304 1.00 62.31 O
ATOM 11 C2' U B 38 -19.963 -52.681 14.106 1.00 60.37 C
ATOM 12 O2' U B 38 -19.644 -52.440 15.451 1.00 67.22 O
ATOM 13 C1' U B 38 -19.891 -51.390 13.309 1.00 55.56 C
ATOM 14 N1 U B 38 -20.959 -51.252 12.314 1.00 58.01 N
ATOM 15 C2 U B 38 -22.222 -50.879 12.739 1.00 58.30 C
ATOM 16 O2 U B 38 -22.526 -50.705 13.916 1.00 57.85 O
ATOM 17 N3 U B 38 -23.121 -50.733 11.709 1.00 54.82 N
ATOM 18 C4 U B 38 -22.867 -50.908 10.360 1.00 50.46 C
ATOM 19 O4 U B 38 -23.761 -50.718 9.541 1.00 51.99 O
ATOM 20 C5 U B 38 -21.522 -51.283 10.023 1.00 51.30 C
ATOM 21 C6 U B 38 -20.629 -51.448 10.992 1.00 53.77 C
ATOM 22 P U B 39 -18.768 -55.902 14.188 1.00 62.50 P
ATOM 23 OP1 U B 39 -18.090 -56.506 13.023 1.00 52.53 O
ATOM 24 OP2 U B 39 -20.248 -55.979 14.264 1.00 68.03 O
ATOM 25 O5' U B 39 -17.960 -56.431 15.479 1.00 55.31 O
TER
Atoms:
C4: (-18.364,-51.720,19.319)
N3: (-17.472,-52.417,20.118)
OP1: (-18.090,-56.506,13.023)
OP2: (-20.248,-55.979,14.264)
C2: (-16.772,-53.520,19.783)
C1': (-16.332,-55.186,18.121)
C3': (-16.200,-57.358,17.543)
O5': (-17.960,-56.431,15.479)
O4': (-16.149,-55.168,16.722)
C5': (-16.638,-56.834,15.136)
P: (-18.768,-55.902,14.188)
C4': (-15.807,-56.523,16.336)
C2': (-17.158,-56.452,18.289)
O2': (-17.318,-56.748,19.657)
N1: (-17.026,-53.992,18.522)
O4: (-18.904,-50.681,19.752)
O2: (-16.004,-54.081,20.549)
C6: (-17.901,-53.368,17.661)
C5: (-18.572,-52.266,18.002)
O3': (-15.064,-57.745,18.314)
N3: (-17.472,-52.417,20.118)
OP1: (-18.090,-56.506,13.023)
OP2: (-20.248,-55.979,14.264)
C2: (-16.772,-53.520,19.783)
C1': (-16.332,-55.186,18.121)
C3': (-16.200,-57.358,17.543)
O5': (-17.960,-56.431,15.479)
O4': (-16.149,-55.168,16.722)
C5': (-16.638,-56.834,15.136)
P: (-18.768,-55.902,14.188)
C4': (-15.807,-56.523,16.336)
C2': (-17.158,-56.452,18.289)
O2': (-17.318,-56.748,19.657)
N1: (-17.026,-53.992,18.522)
O4: (-18.904,-50.681,19.752)
O2: (-16.004,-54.081,20.549)
C6: (-17.901,-53.368,17.661)
C5: (-18.572,-52.266,18.002)
O3': (-15.064,-57.745,18.314)
C4: (-22.867,-50.908,10.360)
N3: (-23.121,-50.733,11.709)
OP1: (-15.359,-54.005,10.030)
OP2: (-17.180,-53.472,8.268)
C2: (-22.222,-50.879,12.739)
C1': (-19.891,-51.390,13.309)
C3': (-18.854,-53.453,13.416)
O5': (-17.521,-53.031,10.780)
O4': (-18.627,-51.271,12.626)
C5': (-16.857,-52.895,12.014)
P: (-16.511,-53.160,9.576)
C4': (-17.816,-52.396,13.079)
C2': (-19.963,-52.681,14.106)
O2': (-19.644,-52.440,15.451)
N1: (-20.959,-51.252,12.314)
O4: (-23.761,-50.718,9.541)
O2: (-22.526,-50.705,13.916)
C6: (-20.629,-51.448,10.992)
C5: (-21.522,-51.283,10.023)
O3': (-18.310,-54.362,14.304)
N3: (-23.121,-50.733,11.709)
OP1: (-15.359,-54.005,10.030)
OP2: (-17.180,-53.472,8.268)
C2: (-22.222,-50.879,12.739)
C1': (-19.891,-51.390,13.309)
C3': (-18.854,-53.453,13.416)
O5': (-17.521,-53.031,10.780)
O4': (-18.627,-51.271,12.626)
C5': (-16.857,-52.895,12.014)
P: (-16.511,-53.160,9.576)
C4': (-17.816,-52.396,13.079)
C2': (-19.963,-52.681,14.106)
O2': (-19.644,-52.440,15.451)
N1: (-20.959,-51.252,12.314)
O4: (-23.761,-50.718,9.541)
O2: (-22.526,-50.705,13.916)
C6: (-20.629,-51.448,10.992)
C5: (-21.522,-51.283,10.023)
O3': (-18.310,-54.362,14.304)
Image (generated by PyMOL):