ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A643:A702

Extra

PDB:
ATOM 1 O3' G A 642 168.611 118.812 -61.218 1.00 72.20 O
ATOM 2 P A A 643 169.501 118.155 -62.390 1.00 71.70 P
ATOM 3 OP1 A A 643 170.422 119.247 -62.825 1.00 70.06 O
ATOM 4 OP2 A A 643 168.627 117.454 -63.380 1.00 70.53 O
ATOM 5 O5' A A 643 170.369 117.069 -61.603 1.00 71.35 O
ATOM 6 C5' A A 643 170.979 115.984 -62.303 1.00 69.71 C
ATOM 7 C4' A A 643 171.235 114.810 -61.382 1.00 67.74 C
ATOM 8 O4' A A 643 172.424 114.989 -60.573 1.00 66.24 O
ATOM 9 C3' A A 643 170.196 114.428 -60.347 1.00 66.57 C
ATOM 10 O3' A A 643 169.052 113.817 -60.922 1.00 66.68 O
ATOM 11 C2' A A 643 170.991 113.451 -59.472 1.00 65.84 C
ATOM 12 O2' A A 643 171.085 112.151 -60.013 1.00 63.95 O
ATOM 13 C1' A A 643 172.400 114.032 -59.531 1.00 65.39 C
ATOM 14 N9 A A 643 172.824 114.642 -58.273 1.00 64.66 N
ATOM 15 C8 A A 643 172.724 115.945 -57.857 1.00 65.35 C
ATOM 16 N7 A A 643 173.235 116.160 -56.667 1.00 64.47 N
ATOM 17 C5 A A 643 173.693 114.911 -56.272 1.00 63.27 C
ATOM 18 C6 A A 643 174.346 114.466 -55.109 1.00 62.77 C
ATOM 19 N6 A A 643 174.662 115.266 -54.086 1.00 62.08 N
ATOM 20 N1 A A 643 174.668 113.155 -55.032 1.00 62.21 N
ATOM 21 C2 A A 643 174.345 112.355 -56.055 1.00 62.40 C
ATOM 22 N3 A A 643 173.731 112.656 -57.198 1.00 63.42 N
ATOM 23 C4 A A 643 173.435 113.966 -57.246 1.00 63.42 C
ATOM 24 P G A 644 167.585 114.163 -60.342 1.00 66.69 P
ATOM 25 OP1 G A 644 166.746 114.595 -61.499 1.00 66.88 O
ATOM 26 OP2 G A 644 167.700 115.042 -59.148 1.00 65.62 O
ATOM 27 O5' G A 644 167.041 112.759 -59.869 1.00 65.29 O
TER

ATOM 1 O3' U B 701 173.081 124.224 -47.347 1.00 98.22 O
ATOM 2 P G B 702 172.429 123.274 -48.467 1.00 93.74 P
ATOM 3 OP1 G B 702 170.952 123.326 -48.265 1.00 95.05 O
ATOM 4 OP2 G B 702 173.141 121.974 -48.390 1.00 93.83 O
ATOM 5 O5' G B 702 172.720 123.984 -49.864 1.00 88.94 O
ATOM 6 C5' G B 702 171.913 125.082 -50.317 1.00 82.61 C
ATOM 7 C4' G B 702 171.461 124.871 -51.753 1.00 78.18 C
ATOM 8 O4' G B 702 172.614 124.538 -52.578 1.00 76.73 O
ATOM 9 C3' G B 702 170.486 123.739 -52.042 1.00 76.31 C
ATOM 10 O3' G B 702 169.119 124.021 -51.731 1.00 74.38 O
ATOM 11 C2' G B 702 170.721 123.486 -53.532 1.00 74.88 C
ATOM 12 O2' G B 702 170.121 124.418 -54.403 1.00 74.77 O
ATOM 13 C1' G B 702 172.226 123.665 -53.634 1.00 73.85 C
ATOM 14 N9 G B 702 172.870 122.366 -53.446 1.00 71.51 N
ATOM 15 C8 G B 702 173.634 121.957 -52.378 1.00 69.92 C
ATOM 16 N7 G B 702 174.011 120.710 -52.466 1.00 69.66 N
ATOM 17 C5 G B 702 173.479 120.269 -53.672 1.00 68.49 C
ATOM 18 C6 G B 702 173.544 118.989 -54.298 1.00 67.26 C
ATOM 19 O6 G B 702 174.092 117.957 -53.887 1.00 64.93 O
ATOM 20 N1 G B 702 172.873 118.980 -55.519 1.00 66.28 N
ATOM 21 C2 G B 702 172.211 120.057 -56.066 1.00 67.21 C
ATOM 22 N2 G B 702 171.615 119.852 -57.256 1.00 66.17 N
ATOM 23 N3 G B 702 172.135 121.250 -55.487 1.00 68.53 N
ATOM 24 C4 G B 702 172.787 121.283 -54.300 1.00 69.71 C
ATOM 25 P G B 703 168.109 122.792 -51.437 1.00 71.54 P
ATOM 26 OP1 G B 703 166.762 123.357 -51.173 1.00 74.84 O
ATOM 27 OP2 G B 703 168.740 121.904 -50.432 1.00 70.19 O
ATOM 28 O5' G B 703 167.986 122.024 -52.832 1.00 69.58 O
TER

Atoms:
OP1: (170.422,119.247,-62.825)
OP2: (168.627,117.454,-63.380)
C3': (170.196,114.428,-60.347)
C1': (172.400,114.032,-59.531)
C5': (170.979,115.984,-62.303)
O4': (172.424,114.989,-60.573)
C8: (172.724,115.945,-57.857)
O2': (171.085,112.151,-60.013)
C6: (174.346,114.466,-55.109)
C5: (173.693,114.911,-56.272)
C4: (173.435,113.966,-57.246)
P: (169.501,118.155,-62.390)
C4': (171.235,114.810,-61.382)
C2': (170.991,113.451,-59.472)
C2: (174.345,112.355,-56.055)
N1: (174.668,113.155,-55.032)
N3: (173.731,112.656,-57.198)
N6: (174.662,115.266,-54.086)
N7: (173.235,116.160,-56.667)
N9: (172.824,114.642,-58.273)
O5': (170.369,117.069,-61.603)
O3': (169.052,113.817,-60.922)
OP1: (170.952,123.326,-48.265)
OP2: (173.141,121.974,-48.390)
C3': (170.486,123.739,-52.042)
C1': (172.226,123.665,-53.634)
C5': (171.913,125.082,-50.317)
O6: (174.092,117.957,-53.887)
O4': (172.614,124.538,-52.578)
C8: (173.634,121.957,-52.378)
C2: (172.211,120.057,-56.066)
C6: (173.544,118.989,-54.298)
C5: (173.479,120.269,-53.672)
C4: (172.787,121.283,-54.300)
P: (172.429,123.274,-48.467)
C4': (171.461,124.871,-51.753)
C2': (170.721,123.486,-53.532)
O2': (170.121,124.418,-54.403)
N1: (172.873,118.980,-55.519)
N2: (171.615,119.852,-57.256)
N3: (172.135,121.250,-55.487)
N7: (174.011,120.710,-52.466)
N9: (172.870,122.366,-53.446)
O5': (172.720,123.984,-49.864)
O3': (169.119,124.021,-51.731)
Image (generated by PyMOL):
PyMOL image
show in jmol