ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01198:02026

Extra

PDB:
ATOM 1 O3' C A1197 36.348 107.764 121.604 1.00 45.49 O
ATOM 2 P G A1198 36.891 108.558 120.307 1.00 45.69 P
ATOM 3 OP1 G A1198 36.728 107.650 119.137 1.00 45.22 O
ATOM 4 OP2 G A1198 38.235 109.101 120.639 1.00 45.27 O
ATOM 5 O5' G A1198 35.904 109.794 120.114 1.00 44.21 O
ATOM 6 C5' G A1198 34.868 109.760 119.118 1.00 42.96 C
ATOM 7 C4' G A1198 34.482 111.161 118.709 1.00 41.55 C
ATOM 8 O4' G A1198 33.466 111.076 117.680 1.00 41.83 O
ATOM 9 C3' G A1198 33.831 111.993 119.796 1.00 41.17 C
ATOM 10 O3' G A1198 34.774 112.634 120.621 1.00 41.73 O
ATOM 11 C2' G A1198 32.995 112.971 119.000 1.00 41.10 C
ATOM 12 O2' G A1198 33.783 113.993 118.429 1.00 39.77 O
ATOM 13 C1' G A1198 32.460 112.045 117.912 1.00 41.31 C
ATOM 14 N9 G A1198 31.251 111.334 118.322 1.00 41.58 N
ATOM 15 C8 G A1198 31.074 109.971 118.414 1.00 41.94 C
ATOM 16 N7 G A1198 29.868 109.634 118.780 1.00 41.74 N
ATOM 17 C5 G A1198 29.212 110.845 118.947 1.00 41.78 C
ATOM 18 C6 G A1198 27.879 111.117 119.325 1.00 41.09 C
ATOM 19 O6 G A1198 26.973 110.316 119.568 1.00 40.88 O
ATOM 20 N1 G A1198 27.638 112.484 119.393 1.00 41.03 N
ATOM 21 C2 G A1198 28.560 113.465 119.108 1.00 42.26 C
ATOM 22 N2 G A1198 28.145 114.738 119.220 1.00 43.60 N
ATOM 23 N3 G A1198 29.800 113.221 118.739 1.00 41.72 N
ATOM 24 C4 G A1198 30.056 111.902 118.680 1.00 41.65 C
ATOM 25 P G A1199 34.531 112.663 122.200 1.00 42.53 P
ATOM 26 OP1 G A1199 35.859 112.895 122.810 1.00 43.58 O
ATOM 27 OP2 G A1199 33.742 111.456 122.570 1.00 39.15 O
ATOM 28 O5' G A1199 33.640 113.957 122.433 1.00 38.00 O
TER

ATOM 1 O3' G B2025 30.729 116.775 117.208 1.00 41.52 O
ATOM 2 P G B2026 29.960 118.075 117.738 1.00 43.75 P
ATOM 3 OP1 G B2026 28.715 117.555 118.375 1.00 43.20 O
ATOM 4 OP2 G B2026 29.865 119.105 116.660 1.00 41.17 O
ATOM 5 O5' G B2026 30.936 118.617 118.870 1.00 41.70 O
ATOM 6 C5' G B2026 30.897 119.982 119.268 1.00 42.39 C
ATOM 7 C4' G B2026 32.201 120.374 119.897 1.00 42.00 C
ATOM 8 O4' G B2026 33.289 119.941 119.043 1.00 42.45 O
ATOM 9 C3' G B2026 32.386 121.876 120.017 1.00 42.74 C
ATOM 10 O3' G B2026 31.744 122.398 121.176 1.00 41.77 O
ATOM 11 C2' G B2026 33.900 122.015 120.026 1.00 43.20 C
ATOM 12 O2' G B2026 34.473 121.709 121.280 1.00 44.99 O
ATOM 13 C1' G B2026 34.298 120.937 119.012 1.00 42.45 C
ATOM 14 N9 G B2026 34.385 121.441 117.645 1.00 41.15 N
ATOM 15 C8 G B2026 33.564 121.116 116.596 1.00 41.49 C
ATOM 16 N7 G B2026 33.873 121.736 115.493 1.00 43.12 N
ATOM 17 C5 G B2026 34.968 122.519 115.833 1.00 42.24 C
ATOM 18 C6 G B2026 35.736 123.421 115.047 1.00 42.05 C
ATOM 19 O6 G B2026 35.595 123.722 113.852 1.00 40.47 O
ATOM 20 N1 G B2026 36.758 124.001 115.791 1.00 42.30 N
ATOM 21 C2 G B2026 37.012 123.747 117.117 1.00 42.11 C
ATOM 22 N2 G B2026 38.055 124.398 117.660 1.00 41.76 N
ATOM 23 N3 G B2026 36.300 122.915 117.857 1.00 41.92 N
ATOM 24 C4 G B2026 35.301 122.341 117.157 1.00 41.35 C
ATOM 25 P A B2027 31.020 123.828 121.107 1.00 40.48 P
ATOM 26 OP1 A B2027 30.242 123.988 122.349 1.00 42.44 O
ATOM 27 OP2 A B2027 30.343 123.987 119.799 1.00 41.83 O
ATOM 28 O5' A B2027 32.230 124.852 121.142 1.00 41.29 O
TER

Atoms:
OP1: (36.728,107.650,119.137)
OP2: (38.235,109.101,120.639)
C3': (33.831,111.993,119.796)
C1': (32.460,112.045,117.912)
C5': (34.868,109.760,119.118)
O6: (26.973,110.316,119.568)
O4': (33.466,111.076,117.680)
C8: (31.074,109.971,118.414)
C2: (28.560,113.465,119.108)
C6: (27.879,111.117,119.325)
C5: (29.212,110.845,118.947)
C4: (30.056,111.902,118.680)
P: (36.891,108.558,120.307)
C4': (34.482,111.161,118.709)
C2': (32.995,112.971,119.000)
O2': (33.783,113.993,118.429)
N1: (27.638,112.484,119.393)
N2: (28.145,114.738,119.220)
N3: (29.800,113.221,118.739)
N7: (29.868,109.634,118.780)
N9: (31.251,111.334,118.322)
O5': (35.904,109.794,120.114)
O3': (34.774,112.634,120.621)
OP1: (28.715,117.555,118.375)
OP2: (29.865,119.105,116.660)
C3': (32.386,121.876,120.017)
C1': (34.298,120.937,119.012)
C5': (30.897,119.982,119.268)
O6: (35.595,123.722,113.852)
O4': (33.289,119.941,119.043)
C8: (33.564,121.116,116.596)
C2: (37.012,123.747,117.117)
C6: (35.736,123.421,115.047)
C5: (34.968,122.519,115.833)
C4: (35.301,122.341,117.157)
P: (29.960,118.075,117.738)
C4': (32.201,120.374,119.897)
C2': (33.900,122.015,120.026)
O2': (34.473,121.709,121.280)
N1: (36.758,124.001,115.791)
N2: (38.055,124.398,117.660)
N3: (36.300,122.915,117.857)
N7: (33.873,121.736,115.493)
N9: (34.385,121.441,117.645)
O5': (30.936,118.617,118.870)
O3': (31.744,122.398,121.176)
Image (generated by PyMOL):
PyMOL image
show in jmol