ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A340:A339

Extra

PDB:
ATOM 1 O3' U A 339 81.576 -9.061 69.777 1.00 79.70 O
ATOM 2 P U A 340 82.525 -8.576 68.580 1.00 91.32 P
ATOM 3 OP1 U A 340 83.848 -9.213 68.812 1.00 85.89 O
ATOM 4 OP2 U A 340 82.429 -7.093 68.473 1.00 82.14 O
ATOM 5 O5' U A 340 81.859 -9.215 67.281 1.00 77.86 O
ATOM 6 C5' U A 340 82.051 -10.590 66.970 1.00 72.33 C
ATOM 7 C4' U A 340 81.211 -10.993 65.771 1.00 77.63 C
ATOM 8 O4' U A 340 79.802 -10.854 66.091 1.00 73.05 O
ATOM 9 C3' U A 340 81.389 -10.207 64.479 1.00 75.29 C
ATOM 10 O3' U A 340 82.487 -10.672 63.695 1.00 72.29 O
ATOM 11 C2' U A 340 80.072 -10.456 63.755 1.00 73.11 C
ATOM 12 O2' U A 340 80.081 -11.674 63.047 1.00 70.73 O
ATOM 13 C1' U A 340 79.074 -10.546 64.914 1.00 71.33 C
ATOM 14 N1 U A 340 78.334 -9.290 65.119 1.00 76.46 N
ATOM 15 C2 U A 340 77.506 -8.838 64.090 1.00 80.42 C
ATOM 16 O2 U A 340 77.337 -9.456 63.044 1.00 82.82 O
ATOM 17 N3 U A 340 76.886 -7.636 64.331 1.00 77.49 N
ATOM 18 C4 U A 340 76.998 -6.855 65.467 1.00 80.57 C
ATOM 19 O4 U A 340 76.429 -5.754 65.515 1.00 86.96 O
ATOM 20 C5 U A 340 77.846 -7.403 66.479 1.00 81.02 C
ATOM 21 C6 U A 340 78.464 -8.570 66.276 1.00 79.09 C
ATOM 22 P A A 341 83.177 -9.688 62.620 1.00 77.76 P
ATOM 23 OP1 A A 341 84.429 -10.316 62.105 1.00 67.76 O
ATOM 24 OP2 A A 341 83.228 -8.322 63.218 1.00 79.86 O
ATOM 25 O5' A A 341 82.121 -9.615 61.432 1.00 70.76 O
TER

ATOM 1 O3' G B 338 79.496 -5.220 73.837 1.00 72.57 O
ATOM 2 P U B 339 80.125 -4.792 72.413 1.00 77.88 P
ATOM 3 OP1 U B 339 81.462 -4.171 72.648 1.00 72.73 O
ATOM 4 OP2 U B 339 79.088 -4.037 71.649 1.00 79.64 O
ATOM 5 O5' U B 339 80.296 -6.162 71.614 1.00 78.73 O
ATOM 6 C5' U B 339 80.355 -7.422 72.283 1.00 75.71 C
ATOM 7 C4' U B 339 79.846 -8.525 71.377 1.00 78.88 C
ATOM 8 O4' U B 339 78.403 -8.495 71.281 1.00 80.43 O
ATOM 9 C3' U B 339 80.293 -8.491 69.925 1.00 76.68 C
ATOM 10 O3' U B 339 81.576 -9.061 69.777 1.00 79.70 O
ATOM 11 C2' U B 339 79.257 -9.361 69.231 1.00 73.09 C
ATOM 12 O2' U B 339 79.597 -10.721 69.341 1.00 70.43 O
ATOM 13 C1' U B 339 78.004 -9.101 70.067 1.00 76.97 C
ATOM 14 N1 U B 339 76.973 -8.281 69.411 1.00 77.78 N
ATOM 15 C2 U B 339 76.067 -8.932 68.576 1.00 75.69 C
ATOM 16 O2 U B 339 76.096 -10.135 68.368 1.00 79.23 O
ATOM 17 N3 U B 339 75.125 -8.120 67.992 1.00 80.11 N
ATOM 18 C4 U B 339 74.989 -6.752 68.142 1.00 83.84 C
ATOM 19 O4 U B 339 74.083 -6.157 67.538 1.00 80.01 O
ATOM 20 C5 U B 339 75.958 -6.152 69.016 1.00 84.26 C
ATOM 21 C6 U B 339 76.893 -6.917 69.606 1.00 81.98 C
ATOM 22 P U B 340 82.525 -8.576 68.580 1.00 91.32 P
ATOM 23 OP1 U B 340 83.848 -9.213 68.812 1.00 85.89 O
ATOM 24 OP2 U B 340 82.429 -7.093 68.473 1.00 82.14 O
ATOM 25 O5' U B 340 81.859 -9.215 67.281 1.00 77.86 O
TER

Atoms:
C4: (76.998,-6.855,65.467)
N3: (76.886,-7.636,64.331)
OP1: (83.848,-9.213,68.812)
OP2: (82.429,-7.093,68.473)
C2: (77.506,-8.838,64.090)
C1': (79.074,-10.546,64.914)
C3': (81.389,-10.207,64.479)
O5': (81.859,-9.215,67.281)
O4': (79.802,-10.854,66.091)
C5': (82.051,-10.590,66.970)
P: (82.525,-8.576,68.580)
C4': (81.211,-10.993,65.771)
C2': (80.072,-10.456,63.755)
O2': (80.081,-11.674,63.047)
N1: (78.334,-9.290,65.119)
O4: (76.429,-5.754,65.515)
O2: (77.337,-9.456,63.044)
C6: (78.464,-8.570,66.276)
C5: (77.846,-7.403,66.479)
O3': (82.487,-10.672,63.695)
C4: (74.989,-6.752,68.142)
N3: (75.125,-8.120,67.992)
OP1: (81.462,-4.171,72.648)
OP2: (79.088,-4.037,71.649)
C2: (76.067,-8.932,68.576)
C1': (78.004,-9.101,70.067)
C3': (80.293,-8.491,69.925)
O5': (80.296,-6.162,71.614)
O4': (78.403,-8.495,71.281)
C5': (80.355,-7.422,72.283)
P: (80.125,-4.792,72.413)
C4': (79.846,-8.525,71.377)
C2': (79.257,-9.361,69.231)
O2': (79.597,-10.721,69.341)
N1: (76.973,-8.281,69.411)
O4: (74.083,-6.157,67.538)
O2: (76.096,-10.135,68.368)
C6: (76.893,-6.917,69.606)
C5: (75.958,-6.152,69.016)
O3': (81.576,-9.061,69.777)
Image (generated by PyMOL):
PyMOL image
show in jmol