Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PF4:R3:R2
Extra
PDB:
ATOM 1 O3' U A 2 -4.965 12.614 20.368 1.00 27.38 O
ATOM 2 P U A 3 -5.750 11.815 19.185 1.00 33.26 P
ATOM 3 OP1 U A 3 -7.102 12.376 19.024 1.00 38.22 O
ATOM 4 OP2 U A 3 -5.570 10.432 19.611 1.00 37.93 O
ATOM 5 O5' U A 3 -4.891 12.075 17.836 1.00 33.45 O
ATOM 6 C5' U A 3 -4.969 13.322 17.136 1.00 34.55 C
ATOM 7 C4' U A 3 -3.676 13.611 16.399 1.00 35.44 C
ATOM 8 O4' U A 3 -2.582 13.752 17.335 1.00 30.52 O
ATOM 9 C3' U A 3 -3.223 12.473 15.493 1.00 39.80 C
ATOM 10 O3' U A 3 -3.868 12.580 14.229 1.00 45.78 O
ATOM 11 C2' U A 3 -1.708 12.652 15.410 1.00 34.98 C
ATOM 12 O2' U A 3 -1.263 13.689 14.548 1.00 34.42 O
ATOM 13 C1' U A 3 -1.448 13.006 16.871 1.00 31.27 C
ATOM 14 N1 U A 3 -1.116 11.857 17.799 1.00 26.10 N
ATOM 15 C2 U A 3 0.080 11.181 17.557 1.00 26.65 C
ATOM 16 O2 U A 3 0.795 11.483 16.599 1.00 28.60 O
ATOM 17 N3 U A 3 0.389 10.135 18.426 1.00 23.54 N
ATOM 18 C4 U A 3 -0.367 9.791 19.538 1.00 22.44 C
ATOM 19 O4 U A 3 0.005 8.888 20.273 1.00 25.88 O
ATOM 20 C5 U A 3 -1.581 10.543 19.762 1.00 23.32 C
ATOM 21 C6 U A 3 -1.920 11.523 18.897 1.00 23.97 C
ATOM 22 P U A 4 -4.305 11.238 13.460 1.00 53.08 P
ATOM 23 OP1 U A 4 -5.112 11.685 12.287 1.00 54.96 O
ATOM 24 OP2 U A 4 -4.830 10.240 14.448 1.00 53.60 O
ATOM 25 O5' U A 4 -2.864 10.724 12.932 1.00 61.59 O
TER
ATOM 1 O3' C B 1 -5.748 19.128 18.761 0.50 34.70 O
ATOM 2 C4' U B 2 -4.362 15.017 20.534 1.00 27.30 C
ATOM 3 O4' U B 2 -3.736 15.198 21.829 1.00 22.27 O
ATOM 4 C3' U B 2 -5.411 13.922 20.782 1.00 28.54 C
ATOM 5 O3' U B 2 -4.965 12.614 20.368 1.00 27.38 O
ATOM 6 C2' U B 2 -5.618 13.910 22.285 1.00 26.09 C
ATOM 7 O2' U B 2 -6.040 12.670 22.846 1.00 29.98 O
ATOM 8 C1' U B 2 -4.201 14.215 22.727 1.00 23.89 C
ATOM 9 N1 U B 2 -4.076 14.747 24.100 1.00 21.21 N
ATOM 10 C2 U B 2 -3.242 14.158 25.041 1.00 21.93 C
ATOM 11 O2 U B 2 -2.569 13.139 24.818 1.00 29.49 O
ATOM 12 N3 U B 2 -3.201 14.765 26.257 1.00 23.33 N
ATOM 13 C4 U B 2 -3.874 15.879 26.640 1.00 22.23 C
ATOM 14 O4 U B 2 -3.761 16.344 27.790 1.00 26.90 O
ATOM 15 C5 U B 2 -4.678 16.453 25.597 1.00 20.34 C
ATOM 16 C6 U B 2 -4.772 15.890 24.405 1.00 21.39 C
ATOM 17 P U B 2 -5.943 17.710 18.062 0.50 33.99 P
ATOM 18 OP1 U B 2 -5.655 17.888 16.623 0.50 35.43 O
ATOM 19 OP2 U B 2 -7.219 17.207 18.584 0.50 33.80 O
ATOM 20 O5' U B 2 -4.800 16.754 18.713 0.50 32.45 O
ATOM 21 C5' U B 2 -4.859 16.414 20.130 0.50 31.04 C
ATOM 22 P U B 3 -5.750 11.815 19.185 1.00 33.26 P
ATOM 23 OP1 U B 3 -7.102 12.376 19.024 1.00 38.22 O
ATOM 24 OP2 U B 3 -5.570 10.432 19.611 1.00 37.93 O
ATOM 25 O5' U B 3 -4.891 12.075 17.836 1.00 33.45 O
TER
ATOM 2 P U A 3 -5.750 11.815 19.185 1.00 33.26 P
ATOM 3 OP1 U A 3 -7.102 12.376 19.024 1.00 38.22 O
ATOM 4 OP2 U A 3 -5.570 10.432 19.611 1.00 37.93 O
ATOM 5 O5' U A 3 -4.891 12.075 17.836 1.00 33.45 O
ATOM 6 C5' U A 3 -4.969 13.322 17.136 1.00 34.55 C
ATOM 7 C4' U A 3 -3.676 13.611 16.399 1.00 35.44 C
ATOM 8 O4' U A 3 -2.582 13.752 17.335 1.00 30.52 O
ATOM 9 C3' U A 3 -3.223 12.473 15.493 1.00 39.80 C
ATOM 10 O3' U A 3 -3.868 12.580 14.229 1.00 45.78 O
ATOM 11 C2' U A 3 -1.708 12.652 15.410 1.00 34.98 C
ATOM 12 O2' U A 3 -1.263 13.689 14.548 1.00 34.42 O
ATOM 13 C1' U A 3 -1.448 13.006 16.871 1.00 31.27 C
ATOM 14 N1 U A 3 -1.116 11.857 17.799 1.00 26.10 N
ATOM 15 C2 U A 3 0.080 11.181 17.557 1.00 26.65 C
ATOM 16 O2 U A 3 0.795 11.483 16.599 1.00 28.60 O
ATOM 17 N3 U A 3 0.389 10.135 18.426 1.00 23.54 N
ATOM 18 C4 U A 3 -0.367 9.791 19.538 1.00 22.44 C
ATOM 19 O4 U A 3 0.005 8.888 20.273 1.00 25.88 O
ATOM 20 C5 U A 3 -1.581 10.543 19.762 1.00 23.32 C
ATOM 21 C6 U A 3 -1.920 11.523 18.897 1.00 23.97 C
ATOM 22 P U A 4 -4.305 11.238 13.460 1.00 53.08 P
ATOM 23 OP1 U A 4 -5.112 11.685 12.287 1.00 54.96 O
ATOM 24 OP2 U A 4 -4.830 10.240 14.448 1.00 53.60 O
ATOM 25 O5' U A 4 -2.864 10.724 12.932 1.00 61.59 O
TER
ATOM 1 O3' C B 1 -5.748 19.128 18.761 0.50 34.70 O
ATOM 2 C4' U B 2 -4.362 15.017 20.534 1.00 27.30 C
ATOM 3 O4' U B 2 -3.736 15.198 21.829 1.00 22.27 O
ATOM 4 C3' U B 2 -5.411 13.922 20.782 1.00 28.54 C
ATOM 5 O3' U B 2 -4.965 12.614 20.368 1.00 27.38 O
ATOM 6 C2' U B 2 -5.618 13.910 22.285 1.00 26.09 C
ATOM 7 O2' U B 2 -6.040 12.670 22.846 1.00 29.98 O
ATOM 8 C1' U B 2 -4.201 14.215 22.727 1.00 23.89 C
ATOM 9 N1 U B 2 -4.076 14.747 24.100 1.00 21.21 N
ATOM 10 C2 U B 2 -3.242 14.158 25.041 1.00 21.93 C
ATOM 11 O2 U B 2 -2.569 13.139 24.818 1.00 29.49 O
ATOM 12 N3 U B 2 -3.201 14.765 26.257 1.00 23.33 N
ATOM 13 C4 U B 2 -3.874 15.879 26.640 1.00 22.23 C
ATOM 14 O4 U B 2 -3.761 16.344 27.790 1.00 26.90 O
ATOM 15 C5 U B 2 -4.678 16.453 25.597 1.00 20.34 C
ATOM 16 C6 U B 2 -4.772 15.890 24.405 1.00 21.39 C
ATOM 17 P U B 2 -5.943 17.710 18.062 0.50 33.99 P
ATOM 18 OP1 U B 2 -5.655 17.888 16.623 0.50 35.43 O
ATOM 19 OP2 U B 2 -7.219 17.207 18.584 0.50 33.80 O
ATOM 20 O5' U B 2 -4.800 16.754 18.713 0.50 32.45 O
ATOM 21 C5' U B 2 -4.859 16.414 20.130 0.50 31.04 C
ATOM 22 P U B 3 -5.750 11.815 19.185 1.00 33.26 P
ATOM 23 OP1 U B 3 -7.102 12.376 19.024 1.00 38.22 O
ATOM 24 OP2 U B 3 -5.570 10.432 19.611 1.00 37.93 O
ATOM 25 O5' U B 3 -4.891 12.075 17.836 1.00 33.45 O
TER
Atoms:
C4: (-0.367,9.791,19.538)
N3: (0.389,10.135,18.426)
OP1: (-7.102,12.376,19.024)
OP2: (-5.570,10.432,19.611)
C2: (0.080,11.181,17.557)
C1': (-1.448,13.006,16.871)
C3': (-3.223,12.473,15.493)
O5': (-4.891,12.075,17.836)
O4': (-2.582,13.752,17.335)
C5': (-4.969,13.322,17.136)
P: (-5.750,11.815,19.185)
C4': (-3.676,13.611,16.399)
C2': (-1.708,12.652,15.410)
O2': (-1.263,13.689,14.548)
N1: (-1.116,11.857,17.799)
O4: (0.005,8.888,20.273)
O2: (0.795,11.483,16.599)
C6: (-1.920,11.523,18.897)
C5: (-1.581,10.543,19.762)
O3': (-3.868,12.580,14.229)
N3: (0.389,10.135,18.426)
OP1: (-7.102,12.376,19.024)
OP2: (-5.570,10.432,19.611)
C2: (0.080,11.181,17.557)
C1': (-1.448,13.006,16.871)
C3': (-3.223,12.473,15.493)
O5': (-4.891,12.075,17.836)
O4': (-2.582,13.752,17.335)
C5': (-4.969,13.322,17.136)
P: (-5.750,11.815,19.185)
C4': (-3.676,13.611,16.399)
C2': (-1.708,12.652,15.410)
O2': (-1.263,13.689,14.548)
N1: (-1.116,11.857,17.799)
O4: (0.005,8.888,20.273)
O2: (0.795,11.483,16.599)
C6: (-1.920,11.523,18.897)
C5: (-1.581,10.543,19.762)
O3': (-3.868,12.580,14.229)
C4: (-3.874,15.879,26.640)
N3: (-3.201,14.765,26.257)
OP1: (-5.655,17.888,16.623)
OP2: (-7.219,17.207,18.584)
C2: (-3.242,14.158,25.041)
C1': (-4.201,14.215,22.727)
C3': (-5.411,13.922,20.782)
O5': (-4.800,16.754,18.713)
O4': (-3.736,15.198,21.829)
C5': (-4.859,16.414,20.130)
P: (-5.943,17.710,18.062)
C4': (-4.362,15.017,20.534)
C2': (-5.618,13.910,22.285)
O2': (-6.040,12.670,22.846)
N1: (-4.076,14.747,24.100)
O4: (-3.761,16.344,27.790)
O2: (-2.569,13.139,24.818)
C6: (-4.772,15.890,24.405)
C5: (-4.678,16.453,25.597)
O3': (-4.965,12.614,20.368)
N3: (-3.201,14.765,26.257)
OP1: (-5.655,17.888,16.623)
OP2: (-7.219,17.207,18.584)
C2: (-3.242,14.158,25.041)
C1': (-4.201,14.215,22.727)
C3': (-5.411,13.922,20.782)
O5': (-4.800,16.754,18.713)
O4': (-3.736,15.198,21.829)
C5': (-4.859,16.414,20.130)
P: (-5.943,17.710,18.062)
C4': (-4.362,15.017,20.534)
C2': (-5.618,13.910,22.285)
O2': (-6.040,12.670,22.846)
N1: (-4.076,14.747,24.100)
O4: (-3.761,16.344,27.790)
O2: (-2.569,13.139,24.818)
C6: (-4.772,15.890,24.405)
C5: (-4.678,16.453,25.597)
O3': (-4.965,12.614,20.368)
Image (generated by PyMOL):