Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PF5:R3:R2
Extra
PDB:
ATOM 1 O3' U A 2 19.788 12.295 -8.409 1.00 30.02 O
ATOM 2 P U A 3 18.937 11.464 -9.482 1.00 36.36 P
ATOM 3 OP1 U A 3 17.594 12.099 -9.651 1.00 35.32 O
ATOM 4 OP2 U A 3 19.106 10.061 -9.092 1.00 32.82 O
ATOM 5 O5' U A 3 19.739 11.663 -10.851 1.00 36.19 O
ATOM 6 C5' U A 3 19.594 12.836 -11.641 1.00 39.92 C
ATOM 7 C4' U A 3 20.888 13.140 -12.365 1.00 41.12 C
ATOM 8 O4' U A 3 21.941 13.333 -11.398 1.00 39.23 O
ATOM 9 C3' U A 3 21.420 12.024 -13.248 1.00 42.28 C
ATOM 10 O3' U A 3 20.751 12.040 -14.483 1.00 46.93 O
ATOM 11 C2' U A 3 22.901 12.417 -13.335 1.00 40.82 C
ATOM 12 O2' U A 3 23.240 13.572 -14.091 1.00 40.61 O
ATOM 13 C1' U A 3 23.127 12.715 -11.858 1.00 38.87 C
ATOM 14 N1 U A 3 23.477 11.520 -10.987 1.00 37.60 N
ATOM 15 C2 U A 3 24.659 10.852 -11.281 1.00 36.19 C
ATOM 16 O2 U A 3 25.416 11.142 -12.209 1.00 36.54 O
ATOM 17 N3 U A 3 24.928 9.819 -10.430 1.00 34.30 N
ATOM 18 C4 U A 3 24.179 9.388 -9.349 1.00 35.82 C
ATOM 19 O4 U A 3 24.592 8.443 -8.704 1.00 36.91 O
ATOM 20 C5 U A 3 22.972 10.127 -9.079 1.00 35.21 C
ATOM 21 C6 U A 3 22.674 11.143 -9.888 1.00 33.47 C
ATOM 22 P U A 4 19.948 10.793 -15.063 1.00 53.02 P
ATOM 23 OP1 U A 4 18.868 11.403 -15.869 1.00 54.91 O
ATOM 24 OP2 U A 4 19.619 9.830 -13.981 1.00 53.86 O
ATOM 25 O5' U A 4 20.976 10.026 -16.031 1.00 56.62 O
TER
ATOM 1 O3' U B 1 18.739 18.372 -9.710 0.50 35.29 O
ATOM 2 O4' U B 2 20.924 14.842 -6.878 1.00 25.32 O
ATOM 3 C3' U B 2 19.312 13.547 -7.997 1.00 27.85 C
ATOM 4 O3' U B 2 19.788 12.295 -8.409 1.00 30.02 O
ATOM 5 C2' U B 2 19.040 13.534 -6.502 1.00 26.87 C
ATOM 6 O2' U B 2 18.645 12.285 -5.948 1.00 29.25 O
ATOM 7 C1' U B 2 20.425 13.868 -6.003 1.00 26.40 C
ATOM 8 N1 U B 2 20.499 14.499 -4.676 1.00 21.50 N
ATOM 9 C2 U B 2 21.359 14.006 -3.733 1.00 19.95 C
ATOM 10 O2 U B 2 22.090 13.051 -3.878 1.00 22.57 O
ATOM 11 N3 U B 2 21.385 14.699 -2.561 1.00 19.86 N
ATOM 12 C4 U B 2 20.629 15.808 -2.216 1.00 23.61 C
ATOM 13 O4 U B 2 20.774 16.289 -1.102 1.00 24.12 O
ATOM 14 C5 U B 2 19.756 16.290 -3.252 1.00 21.94 C
ATOM 15 C6 U B 2 19.723 15.656 -4.430 1.00 20.53 C
ATOM 16 P U B 2 18.409 17.063 -10.557 0.50 30.21 P
ATOM 17 OP1 U B 2 18.762 17.330 -11.974 0.50 30.56 O
ATOM 18 OP2 U B 2 17.068 16.600 -10.162 0.50 30.76 O
ATOM 19 O5' U B 2 19.475 16.019 -9.980 0.50 28.99 O
ATOM 20 C5' U B 2 19.783 16.001 -8.588 0.50 27.68 C
ATOM 21 C4' U B 2 20.343 14.658 -8.172 0.50 26.82 C
ATOM 22 P U B 3 18.937 11.464 -9.482 1.00 36.36 P
ATOM 23 OP1 U B 3 17.594 12.099 -9.651 1.00 35.32 O
ATOM 24 OP2 U B 3 19.106 10.061 -9.092 1.00 32.82 O
ATOM 25 O5' U B 3 19.739 11.663 -10.851 1.00 36.19 O
TER
ATOM 2 P U A 3 18.937 11.464 -9.482 1.00 36.36 P
ATOM 3 OP1 U A 3 17.594 12.099 -9.651 1.00 35.32 O
ATOM 4 OP2 U A 3 19.106 10.061 -9.092 1.00 32.82 O
ATOM 5 O5' U A 3 19.739 11.663 -10.851 1.00 36.19 O
ATOM 6 C5' U A 3 19.594 12.836 -11.641 1.00 39.92 C
ATOM 7 C4' U A 3 20.888 13.140 -12.365 1.00 41.12 C
ATOM 8 O4' U A 3 21.941 13.333 -11.398 1.00 39.23 O
ATOM 9 C3' U A 3 21.420 12.024 -13.248 1.00 42.28 C
ATOM 10 O3' U A 3 20.751 12.040 -14.483 1.00 46.93 O
ATOM 11 C2' U A 3 22.901 12.417 -13.335 1.00 40.82 C
ATOM 12 O2' U A 3 23.240 13.572 -14.091 1.00 40.61 O
ATOM 13 C1' U A 3 23.127 12.715 -11.858 1.00 38.87 C
ATOM 14 N1 U A 3 23.477 11.520 -10.987 1.00 37.60 N
ATOM 15 C2 U A 3 24.659 10.852 -11.281 1.00 36.19 C
ATOM 16 O2 U A 3 25.416 11.142 -12.209 1.00 36.54 O
ATOM 17 N3 U A 3 24.928 9.819 -10.430 1.00 34.30 N
ATOM 18 C4 U A 3 24.179 9.388 -9.349 1.00 35.82 C
ATOM 19 O4 U A 3 24.592 8.443 -8.704 1.00 36.91 O
ATOM 20 C5 U A 3 22.972 10.127 -9.079 1.00 35.21 C
ATOM 21 C6 U A 3 22.674 11.143 -9.888 1.00 33.47 C
ATOM 22 P U A 4 19.948 10.793 -15.063 1.00 53.02 P
ATOM 23 OP1 U A 4 18.868 11.403 -15.869 1.00 54.91 O
ATOM 24 OP2 U A 4 19.619 9.830 -13.981 1.00 53.86 O
ATOM 25 O5' U A 4 20.976 10.026 -16.031 1.00 56.62 O
TER
ATOM 1 O3' U B 1 18.739 18.372 -9.710 0.50 35.29 O
ATOM 2 O4' U B 2 20.924 14.842 -6.878 1.00 25.32 O
ATOM 3 C3' U B 2 19.312 13.547 -7.997 1.00 27.85 C
ATOM 4 O3' U B 2 19.788 12.295 -8.409 1.00 30.02 O
ATOM 5 C2' U B 2 19.040 13.534 -6.502 1.00 26.87 C
ATOM 6 O2' U B 2 18.645 12.285 -5.948 1.00 29.25 O
ATOM 7 C1' U B 2 20.425 13.868 -6.003 1.00 26.40 C
ATOM 8 N1 U B 2 20.499 14.499 -4.676 1.00 21.50 N
ATOM 9 C2 U B 2 21.359 14.006 -3.733 1.00 19.95 C
ATOM 10 O2 U B 2 22.090 13.051 -3.878 1.00 22.57 O
ATOM 11 N3 U B 2 21.385 14.699 -2.561 1.00 19.86 N
ATOM 12 C4 U B 2 20.629 15.808 -2.216 1.00 23.61 C
ATOM 13 O4 U B 2 20.774 16.289 -1.102 1.00 24.12 O
ATOM 14 C5 U B 2 19.756 16.290 -3.252 1.00 21.94 C
ATOM 15 C6 U B 2 19.723 15.656 -4.430 1.00 20.53 C
ATOM 16 P U B 2 18.409 17.063 -10.557 0.50 30.21 P
ATOM 17 OP1 U B 2 18.762 17.330 -11.974 0.50 30.56 O
ATOM 18 OP2 U B 2 17.068 16.600 -10.162 0.50 30.76 O
ATOM 19 O5' U B 2 19.475 16.019 -9.980 0.50 28.99 O
ATOM 20 C5' U B 2 19.783 16.001 -8.588 0.50 27.68 C
ATOM 21 C4' U B 2 20.343 14.658 -8.172 0.50 26.82 C
ATOM 22 P U B 3 18.937 11.464 -9.482 1.00 36.36 P
ATOM 23 OP1 U B 3 17.594 12.099 -9.651 1.00 35.32 O
ATOM 24 OP2 U B 3 19.106 10.061 -9.092 1.00 32.82 O
ATOM 25 O5' U B 3 19.739 11.663 -10.851 1.00 36.19 O
TER
Atoms:
C4: (24.179,9.388,-9.349)
N3: (24.928,9.819,-10.430)
OP1: (17.594,12.099,-9.651)
OP2: (19.106,10.061,-9.092)
C2: (24.659,10.852,-11.281)
C1': (23.127,12.715,-11.858)
C3': (21.420,12.024,-13.248)
O5': (19.739,11.663,-10.851)
O4': (21.941,13.333,-11.398)
C5': (19.594,12.836,-11.641)
P: (18.937,11.464,-9.482)
C4': (20.888,13.140,-12.365)
C2': (22.901,12.417,-13.335)
O2': (23.240,13.572,-14.091)
N1: (23.477,11.520,-10.987)
O4: (24.592,8.443,-8.704)
O2: (25.416,11.142,-12.209)
C6: (22.674,11.143,-9.888)
C5: (22.972,10.127,-9.079)
O3': (20.751,12.040,-14.483)
N3: (24.928,9.819,-10.430)
OP1: (17.594,12.099,-9.651)
OP2: (19.106,10.061,-9.092)
C2: (24.659,10.852,-11.281)
C1': (23.127,12.715,-11.858)
C3': (21.420,12.024,-13.248)
O5': (19.739,11.663,-10.851)
O4': (21.941,13.333,-11.398)
C5': (19.594,12.836,-11.641)
P: (18.937,11.464,-9.482)
C4': (20.888,13.140,-12.365)
C2': (22.901,12.417,-13.335)
O2': (23.240,13.572,-14.091)
N1: (23.477,11.520,-10.987)
O4: (24.592,8.443,-8.704)
O2: (25.416,11.142,-12.209)
C6: (22.674,11.143,-9.888)
C5: (22.972,10.127,-9.079)
O3': (20.751,12.040,-14.483)
C4: (20.629,15.808,-2.216)
N3: (21.385,14.699,-2.561)
OP1: (18.762,17.330,-11.974)
OP2: (17.068,16.600,-10.162)
C2: (21.359,14.006,-3.733)
C1': (20.425,13.868,-6.003)
C3': (19.312,13.547,-7.997)
O5': (19.475,16.019,-9.980)
O4': (20.924,14.842,-6.878)
C5': (19.783,16.001,-8.588)
P: (18.409,17.063,-10.557)
C4': (20.343,14.658,-8.172)
C2': (19.040,13.534,-6.502)
O2': (18.645,12.285,-5.948)
N1: (20.499,14.499,-4.676)
O4: (20.774,16.289,-1.102)
O2: (22.090,13.051,-3.878)
C6: (19.723,15.656,-4.430)
C5: (19.756,16.290,-3.252)
O3': (19.788,12.295,-8.409)
N3: (21.385,14.699,-2.561)
OP1: (18.762,17.330,-11.974)
OP2: (17.068,16.600,-10.162)
C2: (21.359,14.006,-3.733)
C1': (20.425,13.868,-6.003)
C3': (19.312,13.547,-7.997)
O5': (19.475,16.019,-9.980)
O4': (20.924,14.842,-6.878)
C5': (19.783,16.001,-8.588)
P: (18.409,17.063,-10.557)
C4': (20.343,14.658,-8.172)
C2': (19.040,13.534,-6.502)
O2': (18.645,12.285,-5.948)
N1: (20.499,14.499,-4.676)
O4: (20.774,16.289,-1.102)
O2: (22.090,13.051,-3.878)
C6: (19.723,15.656,-4.430)
C5: (19.756,16.290,-3.252)
O3': (19.788,12.295,-8.409)
Image (generated by PyMOL):