Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PU4:R16:R17
Extra
PDB:
ATOM 1 O3' U A 15 5.175 41.909 54.482 1.00140.80 O
ATOM 2 P U A 16 5.403 42.686 53.085 1.00138.96 P
ATOM 3 OP1 U A 16 5.674 41.657 52.050 1.00138.14 O
ATOM 4 OP2 U A 16 6.395 43.759 53.340 1.00134.35 O
ATOM 5 O5' U A 16 3.970 43.304 52.790 1.00138.72 O
ATOM 6 C5' U A 16 3.818 44.692 52.561 1.00134.94 C
ATOM 7 C4' U A 16 3.347 45.368 53.819 1.00137.95 C
ATOM 8 O4' U A 16 4.416 45.412 54.804 1.00134.53 O
ATOM 9 C3' U A 16 2.921 46.815 53.665 1.00141.51 C
ATOM 10 O3' U A 16 1.630 46.926 53.082 1.00147.41 O
ATOM 11 C2' U A 16 3.046 47.344 55.094 1.00139.30 C
ATOM 12 O2' U A 16 1.893 47.036 55.868 1.00138.95 O
ATOM 13 C1' U A 16 4.249 46.550 55.628 1.00136.59 C
ATOM 14 N1 U A 16 5.485 47.374 55.836 1.00134.38 N
ATOM 15 C2 U A 16 6.770 46.814 55.837 1.00125.75 C
ATOM 16 O2 U A 16 7.011 45.628 55.646 1.00118.04 O
ATOM 17 N3 U A 16 7.790 47.723 56.068 1.00119.41 N
ATOM 18 C4 U A 16 7.673 49.091 56.300 1.00114.00 C
ATOM 19 O4 U A 16 8.671 49.795 56.491 1.00 97.02 O
ATOM 20 C5 U A 16 6.329 49.578 56.292 1.00123.21 C
ATOM 21 C6 U A 16 5.320 48.727 56.072 1.00130.81 C
ATOM 22 P U A 17 0.879 48.329 52.809 1.00160.14 P
ATOM 23 OP1 U A 17 0.194 48.607 54.102 1.00150.38 O
ATOM 24 OP2 U A 17 0.024 48.120 51.612 1.00153.66 O
ATOM 25 O5' U A 17 2.036 49.390 52.471 1.00145.72 O
TER
ATOM 1 O3' U B 16 1.630 46.926 53.082 1.00147.41 O
ATOM 2 P U B 17 0.879 48.329 52.809 1.00160.14 P
ATOM 3 OP1 U B 17 0.194 48.607 54.102 1.00150.38 O
ATOM 4 OP2 U B 17 0.024 48.120 51.612 1.00153.66 O
ATOM 5 O5' U B 17 2.036 49.390 52.471 1.00145.72 O
ATOM 6 C5' U B 17 2.787 50.047 53.489 1.00145.68 C
ATOM 7 C4' U B 17 1.880 50.641 54.539 1.00144.61 C
ATOM 8 O4' U B 17 2.172 50.096 55.855 1.00141.01 O
ATOM 9 C3' U B 17 1.933 52.150 54.736 1.00148.97 C
ATOM 10 O3' U B 17 1.253 52.875 53.712 1.00156.23 O
ATOM 11 C2' U B 17 1.321 52.314 56.133 1.00148.27 C
ATOM 12 O2' U B 17 -0.099 52.359 56.094 1.00149.42 O
ATOM 13 C1' U B 17 1.730 51.015 56.841 1.00145.01 C
ATOM 14 N1 U B 17 2.626 51.189 58.025 1.00145.25 N
ATOM 15 C2 U B 17 2.917 50.062 58.786 1.00137.72 C
ATOM 16 O2 U B 17 2.498 48.947 58.504 1.00131.90 O
ATOM 17 N3 U B 17 3.729 50.293 59.880 1.00133.53 N
ATOM 18 C4 U B 17 4.257 51.506 60.292 1.00128.65 C
ATOM 19 O4 U B 17 4.969 51.542 61.296 1.00111.66 O
ATOM 20 C5 U B 17 3.901 52.627 59.466 1.00133.58 C
ATOM 21 C6 U B 17 3.112 52.435 58.396 1.00139.55 C
ATOM 22 P U B 18 1.863 53.322 52.262 1.00166.69 P
ATOM 23 OP1 U B 18 1.597 52.177 51.337 1.00145.79 O
ATOM 24 OP2 U B 18 3.261 53.819 52.439 1.00129.30 O
ATOM 25 O5' U B 18 0.905 54.555 51.879 1.00162.02 O
TER
ATOM 2 P U A 16 5.403 42.686 53.085 1.00138.96 P
ATOM 3 OP1 U A 16 5.674 41.657 52.050 1.00138.14 O
ATOM 4 OP2 U A 16 6.395 43.759 53.340 1.00134.35 O
ATOM 5 O5' U A 16 3.970 43.304 52.790 1.00138.72 O
ATOM 6 C5' U A 16 3.818 44.692 52.561 1.00134.94 C
ATOM 7 C4' U A 16 3.347 45.368 53.819 1.00137.95 C
ATOM 8 O4' U A 16 4.416 45.412 54.804 1.00134.53 O
ATOM 9 C3' U A 16 2.921 46.815 53.665 1.00141.51 C
ATOM 10 O3' U A 16 1.630 46.926 53.082 1.00147.41 O
ATOM 11 C2' U A 16 3.046 47.344 55.094 1.00139.30 C
ATOM 12 O2' U A 16 1.893 47.036 55.868 1.00138.95 O
ATOM 13 C1' U A 16 4.249 46.550 55.628 1.00136.59 C
ATOM 14 N1 U A 16 5.485 47.374 55.836 1.00134.38 N
ATOM 15 C2 U A 16 6.770 46.814 55.837 1.00125.75 C
ATOM 16 O2 U A 16 7.011 45.628 55.646 1.00118.04 O
ATOM 17 N3 U A 16 7.790 47.723 56.068 1.00119.41 N
ATOM 18 C4 U A 16 7.673 49.091 56.300 1.00114.00 C
ATOM 19 O4 U A 16 8.671 49.795 56.491 1.00 97.02 O
ATOM 20 C5 U A 16 6.329 49.578 56.292 1.00123.21 C
ATOM 21 C6 U A 16 5.320 48.727 56.072 1.00130.81 C
ATOM 22 P U A 17 0.879 48.329 52.809 1.00160.14 P
ATOM 23 OP1 U A 17 0.194 48.607 54.102 1.00150.38 O
ATOM 24 OP2 U A 17 0.024 48.120 51.612 1.00153.66 O
ATOM 25 O5' U A 17 2.036 49.390 52.471 1.00145.72 O
TER
ATOM 1 O3' U B 16 1.630 46.926 53.082 1.00147.41 O
ATOM 2 P U B 17 0.879 48.329 52.809 1.00160.14 P
ATOM 3 OP1 U B 17 0.194 48.607 54.102 1.00150.38 O
ATOM 4 OP2 U B 17 0.024 48.120 51.612 1.00153.66 O
ATOM 5 O5' U B 17 2.036 49.390 52.471 1.00145.72 O
ATOM 6 C5' U B 17 2.787 50.047 53.489 1.00145.68 C
ATOM 7 C4' U B 17 1.880 50.641 54.539 1.00144.61 C
ATOM 8 O4' U B 17 2.172 50.096 55.855 1.00141.01 O
ATOM 9 C3' U B 17 1.933 52.150 54.736 1.00148.97 C
ATOM 10 O3' U B 17 1.253 52.875 53.712 1.00156.23 O
ATOM 11 C2' U B 17 1.321 52.314 56.133 1.00148.27 C
ATOM 12 O2' U B 17 -0.099 52.359 56.094 1.00149.42 O
ATOM 13 C1' U B 17 1.730 51.015 56.841 1.00145.01 C
ATOM 14 N1 U B 17 2.626 51.189 58.025 1.00145.25 N
ATOM 15 C2 U B 17 2.917 50.062 58.786 1.00137.72 C
ATOM 16 O2 U B 17 2.498 48.947 58.504 1.00131.90 O
ATOM 17 N3 U B 17 3.729 50.293 59.880 1.00133.53 N
ATOM 18 C4 U B 17 4.257 51.506 60.292 1.00128.65 C
ATOM 19 O4 U B 17 4.969 51.542 61.296 1.00111.66 O
ATOM 20 C5 U B 17 3.901 52.627 59.466 1.00133.58 C
ATOM 21 C6 U B 17 3.112 52.435 58.396 1.00139.55 C
ATOM 22 P U B 18 1.863 53.322 52.262 1.00166.69 P
ATOM 23 OP1 U B 18 1.597 52.177 51.337 1.00145.79 O
ATOM 24 OP2 U B 18 3.261 53.819 52.439 1.00129.30 O
ATOM 25 O5' U B 18 0.905 54.555 51.879 1.00162.02 O
TER
Atoms:
C4: (7.673,49.091,56.300)
N3: (7.790,47.723,56.068)
OP1: (5.674,41.657,52.050)
OP2: (6.395,43.759,53.340)
C2: (6.770,46.814,55.837)
C1': (4.249,46.550,55.628)
C3': (2.921,46.815,53.665)
O5': (3.970,43.304,52.790)
O4': (4.416,45.412,54.804)
C5': (3.818,44.692,52.561)
P: (5.403,42.686,53.085)
C4': (3.347,45.368,53.819)
C2': (3.046,47.344,55.094)
O2': (1.893,47.036,55.868)
N1: (5.485,47.374,55.836)
O4: (8.671,49.795,56.491)
O2: (7.011,45.628,55.646)
C6: (5.320,48.727,56.072)
C5: (6.329,49.578,56.292)
O3': (1.630,46.926,53.082)
N3: (7.790,47.723,56.068)
OP1: (5.674,41.657,52.050)
OP2: (6.395,43.759,53.340)
C2: (6.770,46.814,55.837)
C1': (4.249,46.550,55.628)
C3': (2.921,46.815,53.665)
O5': (3.970,43.304,52.790)
O4': (4.416,45.412,54.804)
C5': (3.818,44.692,52.561)
P: (5.403,42.686,53.085)
C4': (3.347,45.368,53.819)
C2': (3.046,47.344,55.094)
O2': (1.893,47.036,55.868)
N1: (5.485,47.374,55.836)
O4: (8.671,49.795,56.491)
O2: (7.011,45.628,55.646)
C6: (5.320,48.727,56.072)
C5: (6.329,49.578,56.292)
O3': (1.630,46.926,53.082)
C4: (4.257,51.506,60.292)
N3: (3.729,50.293,59.880)
OP1: (0.194,48.607,54.102)
OP2: (0.024,48.120,51.612)
C2: (2.917,50.062,58.786)
C1': (1.730,51.015,56.841)
C3': (1.933,52.150,54.736)
O5': (2.036,49.390,52.471)
O4': (2.172,50.096,55.855)
C5': (2.787,50.047,53.489)
P: (0.879,48.329,52.809)
C4': (1.880,50.641,54.539)
C2': (1.321,52.314,56.133)
O2': (-0.099,52.359,56.094)
N1: (2.626,51.189,58.025)
O4: (4.969,51.542,61.296)
O2: (2.498,48.947,58.504)
C6: (3.112,52.435,58.396)
C5: (3.901,52.627,59.466)
O3': (1.253,52.875,53.712)
N3: (3.729,50.293,59.880)
OP1: (0.194,48.607,54.102)
OP2: (0.024,48.120,51.612)
C2: (2.917,50.062,58.786)
C1': (1.730,51.015,56.841)
C3': (1.933,52.150,54.736)
O5': (2.036,49.390,52.471)
O4': (2.172,50.096,55.855)
C5': (2.787,50.047,53.489)
P: (0.879,48.329,52.809)
C4': (1.880,50.641,54.539)
C2': (1.321,52.314,56.133)
O2': (-0.099,52.359,56.094)
N1: (2.626,51.189,58.025)
O4: (4.969,51.542,61.296)
O2: (2.498,48.947,58.504)
C6: (3.112,52.435,58.396)
C5: (3.901,52.627,59.466)
O3': (1.253,52.875,53.712)
Image (generated by PyMOL):