ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RKF:D34:D32

Extra

PDB:
ATOM 1 O3' U A 33 41.205 -7.253 -78.947 1.00 65.86 O
ATOM 2 P U A 34 40.451 -6.561 -77.704 1.00 74.68 P
ATOM 3 OP1 U A 34 41.502 -6.041 -76.795 1.00 68.84 O
ATOM 4 OP2 U A 34 39.484 -7.551 -77.174 1.00 64.02 O
ATOM 5 O5' U A 34 39.674 -5.342 -78.380 1.00 65.53 O
ATOM 6 C5' U A 34 40.358 -4.132 -78.695 1.00 62.57 C
ATOM 7 C4' U A 34 39.437 -2.932 -78.692 1.00 56.79 C
ATOM 8 O4' U A 34 38.717 -2.870 -79.954 1.00 49.65 O
ATOM 9 C3' U A 34 38.377 -2.907 -77.589 1.00 58.81 C
ATOM 10 O3' U A 34 38.190 -1.562 -77.146 1.00 54.09 O
ATOM 11 C2' U A 34 37.122 -3.377 -78.319 1.00 51.76 C
ATOM 12 O2' U A 34 35.909 -2.948 -77.738 1.00 49.32 O
ATOM 13 C1' U A 34 37.331 -2.768 -79.701 1.00 50.19 C
ATOM 14 N1 U A 34 36.605 -3.459 -80.787 1.00 47.98 N
ATOM 15 C2 U A 34 36.028 -2.660 -81.753 1.00 50.45 C
ATOM 16 O2 U A 34 36.105 -1.445 -81.732 1.00 55.85 O
ATOM 17 N3 U A 34 35.363 -3.331 -82.747 1.00 49.66 N
ATOM 18 C4 U A 34 35.217 -4.695 -82.869 1.00 50.43 C
ATOM 19 O4 U A 34 34.586 -5.153 -83.823 1.00 51.28 O
ATOM 20 C5 U A 34 35.842 -5.454 -81.831 1.00 50.48 C
ATOM 21 C6 U A 34 36.499 -4.829 -80.848 1.00 52.67 C
ATOM 22 P C A 35 37.768 -1.257 -75.624 1.00 63.19 P
ATOM 23 OP1 C A 35 38.935 -1.589 -74.769 1.00 65.55 O
ATOM 24 OP2 C A 35 36.483 -1.956 -75.378 1.00 57.83 O
ATOM 25 O5' C A 35 37.532 0.319 -75.632 1.00 53.20 O
TER

ATOM 1 O3' G B 31 33.799 -11.339 -73.854 1.00 46.10 O
ATOM 2 P U B 32 35.052 -10.853 -74.727 1.00 49.76 P
ATOM 3 OP1 U B 32 35.573 -12.043 -75.445 1.00 49.04 O
ATOM 4 OP2 U B 32 35.960 -10.111 -73.820 1.00 50.59 O
ATOM 5 O5' U B 32 34.384 -9.848 -75.757 1.00 51.17 O
ATOM 6 C5' U B 32 33.867 -10.312 -76.996 1.00 50.36 C
ATOM 7 C4' U B 32 34.507 -9.596 -78.151 1.00 51.07 C
ATOM 8 O4' U B 32 34.060 -8.222 -78.134 1.00 47.73 O
ATOM 9 C3' U B 32 36.027 -9.575 -78.111 1.00 59.27 C
ATOM 10 O3' U B 32 36.589 -9.878 -79.401 1.00 63.27 O
ATOM 11 C2' U B 32 36.392 -8.161 -77.640 1.00 53.85 C
ATOM 12 O2' U B 32 37.526 -7.613 -78.270 1.00 56.33 O
ATOM 13 C1' U B 32 35.136 -7.329 -77.926 1.00 51.54 C
ATOM 14 N1 U B 32 34.758 -6.438 -76.809 1.00 49.49 N
ATOM 15 C2 U B 32 34.062 -5.270 -77.063 1.00 47.94 C
ATOM 16 O2 U B 32 33.739 -4.906 -78.181 1.00 43.53 O
ATOM 17 N3 U B 32 33.757 -4.534 -75.946 1.00 45.55 N
ATOM 18 C4 U B 32 34.064 -4.836 -74.636 1.00 44.78 C
ATOM 19 O4 U B 32 33.716 -4.064 -73.743 1.00 42.85 O
ATOM 20 C5 U B 32 34.777 -6.062 -74.457 1.00 47.03 C
ATOM 21 C6 U B 32 35.087 -6.801 -75.524 1.00 50.77 C
ATOM 22 P U B 33 36.439 -8.900 -80.674 1.00 62.44 P
ATOM 23 OP1 U B 33 35.601 -7.754 -80.273 1.00 65.03 O
ATOM 24 OP2 U B 33 35.995 -9.738 -81.813 1.00 54.09 O
ATOM 25 O5' U B 33 37.938 -8.421 -80.909 1.00 59.66 O
TER

Atoms:
C4: (35.217,-4.695,-82.869)
N3: (35.363,-3.331,-82.747)
OP1: (41.502,-6.041,-76.795)
OP2: (39.484,-7.551,-77.174)
C2: (36.028,-2.660,-81.753)
C1': (37.331,-2.768,-79.701)
C3': (38.377,-2.907,-77.589)
O5': (39.674,-5.342,-78.380)
O4': (38.717,-2.870,-79.954)
C5': (40.358,-4.132,-78.695)
P: (40.451,-6.561,-77.704)
C4': (39.437,-2.932,-78.692)
C2': (37.122,-3.377,-78.319)
O2': (35.909,-2.948,-77.738)
N1: (36.605,-3.459,-80.787)
O4: (34.586,-5.153,-83.823)
O2: (36.105,-1.445,-81.732)
C6: (36.499,-4.829,-80.848)
C5: (35.842,-5.454,-81.831)
O3': (38.190,-1.562,-77.146)
C4: (34.064,-4.836,-74.636)
N3: (33.757,-4.534,-75.946)
OP1: (35.573,-12.043,-75.445)
OP2: (35.960,-10.111,-73.820)
C2: (34.062,-5.270,-77.063)
C1': (35.136,-7.329,-77.926)
C3': (36.027,-9.575,-78.111)
O5': (34.384,-9.848,-75.757)
O4': (34.060,-8.222,-78.134)
C5': (33.867,-10.312,-76.996)
P: (35.052,-10.853,-74.727)
C4': (34.507,-9.596,-78.151)
C2': (36.392,-8.161,-77.640)
O2': (37.526,-7.613,-78.270)
N1: (34.758,-6.438,-76.809)
O4: (33.716,-4.064,-73.743)
O2: (33.739,-4.906,-78.181)
C6: (35.087,-6.801,-75.524)
C5: (34.777,-6.062,-74.457)
O3': (36.589,-9.878,-79.401)
Image (generated by PyMOL):
PyMOL image
show in jmol