Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2501:2500
Extra
PDB:
ATOM 1 O3' U A 500 -110.169 22.607 35.237 1.00234.68 O
ATOM 2 P U A 501 -110.387 22.509 36.837 1.00236.38 P
ATOM 3 OP1 U A 501 -111.688 21.846 37.098 1.00236.87 O
ATOM 4 OP2 U A 501 -110.165 23.873 37.380 1.00236.07 O
ATOM 5 O5' U A 501 -109.195 21.544 37.294 1.00236.39 O
ATOM 6 C5' U A 501 -108.070 21.297 36.453 1.00236.09 C
ATOM 7 C4' U A 501 -107.435 19.956 36.759 1.00236.30 C
ATOM 8 O4' U A 501 -108.333 18.881 36.377 1.00236.72 O
ATOM 9 C3' U A 501 -106.149 19.637 36.013 1.00235.99 C
ATOM 10 O3' U A 501 -105.013 20.246 36.588 1.00235.65 O
ATOM 11 C2' U A 501 -106.107 18.117 36.053 1.00236.35 C
ATOM 12 O2' U A 501 -105.660 17.660 37.320 1.00236.49 O
ATOM 13 C1' U A 501 -107.586 17.773 35.912 1.00236.76 C
ATOM 14 N1 U A 501 -107.959 17.516 34.511 1.00236.75 N
ATOM 15 C2 U A 501 -107.511 16.381 33.870 1.00236.85 C
ATOM 16 O2 U A 501 -106.800 15.550 34.410 1.00236.94 O
ATOM 17 N3 U A 501 -107.942 16.268 32.564 1.00236.83 N
ATOM 18 C4 U A 501 -108.751 17.151 31.862 1.00236.73 C
ATOM 19 O4 U A 501 -109.065 16.932 30.695 1.00236.72 O
ATOM 20 C5 U A 501 -109.162 18.291 32.599 1.00236.63 C
ATOM 21 C6 U A 501 -108.747 18.411 33.855 1.00236.64 C
ATOM 22 P G A 502 -104.395 21.567 35.926 1.00199.01 P
ATOM 23 OP1 G A 502 -104.287 22.580 37.002 1.00198.87 O
ATOM 24 OP2 G A 502 -105.217 21.879 34.734 1.00199.00 O
ATOM 25 O5' G A 502 -102.943 21.091 35.472 1.00198.74 O
TER
ATOM 1 O3' C B 499 -116.629 24.561 33.808 1.00219.30 O
ATOM 2 P U B 500 -115.165 25.116 33.428 1.00235.06 P
ATOM 3 OP1 U B 500 -115.080 26.507 33.939 1.00234.77 O
ATOM 4 OP2 U B 500 -114.965 24.873 31.978 1.00234.91 O
ATOM 5 O5' U B 500 -114.199 24.179 34.268 1.00235.14 O
ATOM 6 C5' U B 500 -113.074 23.556 33.662 1.00234.96 C
ATOM 7 C4' U B 500 -112.533 22.459 34.536 1.00235.19 C
ATOM 8 O4' U B 500 -113.342 21.275 34.329 1.00235.64 O
ATOM 9 C3' U B 500 -111.087 22.059 34.265 1.00234.92 C
ATOM 10 O3' U B 500 -110.169 22.607 35.237 1.00234.68 O
ATOM 11 C2' U B 500 -111.080 20.526 34.303 1.00235.28 C
ATOM 12 O2' U B 500 -110.533 19.960 35.473 1.00235.42 O
ATOM 13 C1' U B 500 -112.540 20.125 34.133 1.00235.70 C
ATOM 14 N1 U B 500 -112.818 19.593 32.785 1.00235.74 N
ATOM 15 C2 U B 500 -112.590 18.248 32.590 1.00235.99 C
ATOM 16 O2 U B 500 -112.223 17.507 33.491 1.00236.18 O
ATOM 17 N3 U B 500 -112.825 17.812 31.306 1.00236.00 N
ATOM 18 C4 U B 500 -113.237 18.571 30.225 1.00235.80 C
ATOM 19 O4 U B 500 -113.409 18.028 29.131 1.00235.85 O
ATOM 20 C5 U B 500 -113.422 19.962 30.507 1.00235.54 C
ATOM 21 C6 U B 500 -113.205 20.412 31.745 1.00235.52 C
ATOM 22 P U B 501 -110.387 22.509 36.837 1.00236.38 P
ATOM 23 OP1 U B 501 -111.688 21.846 37.098 1.00236.87 O
ATOM 24 OP2 U B 501 -110.165 23.873 37.380 1.00236.07 O
ATOM 25 O5' U B 501 -109.195 21.544 37.294 1.00236.39 O
TER
ATOM 2 P U A 501 -110.387 22.509 36.837 1.00236.38 P
ATOM 3 OP1 U A 501 -111.688 21.846 37.098 1.00236.87 O
ATOM 4 OP2 U A 501 -110.165 23.873 37.380 1.00236.07 O
ATOM 5 O5' U A 501 -109.195 21.544 37.294 1.00236.39 O
ATOM 6 C5' U A 501 -108.070 21.297 36.453 1.00236.09 C
ATOM 7 C4' U A 501 -107.435 19.956 36.759 1.00236.30 C
ATOM 8 O4' U A 501 -108.333 18.881 36.377 1.00236.72 O
ATOM 9 C3' U A 501 -106.149 19.637 36.013 1.00235.99 C
ATOM 10 O3' U A 501 -105.013 20.246 36.588 1.00235.65 O
ATOM 11 C2' U A 501 -106.107 18.117 36.053 1.00236.35 C
ATOM 12 O2' U A 501 -105.660 17.660 37.320 1.00236.49 O
ATOM 13 C1' U A 501 -107.586 17.773 35.912 1.00236.76 C
ATOM 14 N1 U A 501 -107.959 17.516 34.511 1.00236.75 N
ATOM 15 C2 U A 501 -107.511 16.381 33.870 1.00236.85 C
ATOM 16 O2 U A 501 -106.800 15.550 34.410 1.00236.94 O
ATOM 17 N3 U A 501 -107.942 16.268 32.564 1.00236.83 N
ATOM 18 C4 U A 501 -108.751 17.151 31.862 1.00236.73 C
ATOM 19 O4 U A 501 -109.065 16.932 30.695 1.00236.72 O
ATOM 20 C5 U A 501 -109.162 18.291 32.599 1.00236.63 C
ATOM 21 C6 U A 501 -108.747 18.411 33.855 1.00236.64 C
ATOM 22 P G A 502 -104.395 21.567 35.926 1.00199.01 P
ATOM 23 OP1 G A 502 -104.287 22.580 37.002 1.00198.87 O
ATOM 24 OP2 G A 502 -105.217 21.879 34.734 1.00199.00 O
ATOM 25 O5' G A 502 -102.943 21.091 35.472 1.00198.74 O
TER
ATOM 1 O3' C B 499 -116.629 24.561 33.808 1.00219.30 O
ATOM 2 P U B 500 -115.165 25.116 33.428 1.00235.06 P
ATOM 3 OP1 U B 500 -115.080 26.507 33.939 1.00234.77 O
ATOM 4 OP2 U B 500 -114.965 24.873 31.978 1.00234.91 O
ATOM 5 O5' U B 500 -114.199 24.179 34.268 1.00235.14 O
ATOM 6 C5' U B 500 -113.074 23.556 33.662 1.00234.96 C
ATOM 7 C4' U B 500 -112.533 22.459 34.536 1.00235.19 C
ATOM 8 O4' U B 500 -113.342 21.275 34.329 1.00235.64 O
ATOM 9 C3' U B 500 -111.087 22.059 34.265 1.00234.92 C
ATOM 10 O3' U B 500 -110.169 22.607 35.237 1.00234.68 O
ATOM 11 C2' U B 500 -111.080 20.526 34.303 1.00235.28 C
ATOM 12 O2' U B 500 -110.533 19.960 35.473 1.00235.42 O
ATOM 13 C1' U B 500 -112.540 20.125 34.133 1.00235.70 C
ATOM 14 N1 U B 500 -112.818 19.593 32.785 1.00235.74 N
ATOM 15 C2 U B 500 -112.590 18.248 32.590 1.00235.99 C
ATOM 16 O2 U B 500 -112.223 17.507 33.491 1.00236.18 O
ATOM 17 N3 U B 500 -112.825 17.812 31.306 1.00236.00 N
ATOM 18 C4 U B 500 -113.237 18.571 30.225 1.00235.80 C
ATOM 19 O4 U B 500 -113.409 18.028 29.131 1.00235.85 O
ATOM 20 C5 U B 500 -113.422 19.962 30.507 1.00235.54 C
ATOM 21 C6 U B 500 -113.205 20.412 31.745 1.00235.52 C
ATOM 22 P U B 501 -110.387 22.509 36.837 1.00236.38 P
ATOM 23 OP1 U B 501 -111.688 21.846 37.098 1.00236.87 O
ATOM 24 OP2 U B 501 -110.165 23.873 37.380 1.00236.07 O
ATOM 25 O5' U B 501 -109.195 21.544 37.294 1.00236.39 O
TER
Atoms:
C4: (-108.751,17.151,31.862)
N3: (-107.942,16.268,32.564)
OP1: (-111.688,21.846,37.098)
OP2: (-110.165,23.873,37.380)
C2: (-107.511,16.381,33.870)
C1': (-107.586,17.773,35.912)
C3': (-106.149,19.637,36.013)
O5': (-109.195,21.544,37.294)
O4': (-108.333,18.881,36.377)
C5': (-108.070,21.297,36.453)
P: (-110.387,22.509,36.837)
C4': (-107.435,19.956,36.759)
C2': (-106.107,18.117,36.053)
O2': (-105.660,17.660,37.320)
N1: (-107.959,17.516,34.511)
O4: (-109.065,16.932,30.695)
O2: (-106.800,15.550,34.410)
C6: (-108.747,18.411,33.855)
C5: (-109.162,18.291,32.599)
O3': (-105.013,20.246,36.588)
N3: (-107.942,16.268,32.564)
OP1: (-111.688,21.846,37.098)
OP2: (-110.165,23.873,37.380)
C2: (-107.511,16.381,33.870)
C1': (-107.586,17.773,35.912)
C3': (-106.149,19.637,36.013)
O5': (-109.195,21.544,37.294)
O4': (-108.333,18.881,36.377)
C5': (-108.070,21.297,36.453)
P: (-110.387,22.509,36.837)
C4': (-107.435,19.956,36.759)
C2': (-106.107,18.117,36.053)
O2': (-105.660,17.660,37.320)
N1: (-107.959,17.516,34.511)
O4: (-109.065,16.932,30.695)
O2: (-106.800,15.550,34.410)
C6: (-108.747,18.411,33.855)
C5: (-109.162,18.291,32.599)
O3': (-105.013,20.246,36.588)
C4: (-113.237,18.571,30.225)
N3: (-112.825,17.812,31.306)
OP1: (-115.080,26.507,33.939)
OP2: (-114.965,24.873,31.978)
C2: (-112.590,18.248,32.590)
C1': (-112.540,20.125,34.133)
C3': (-111.087,22.059,34.265)
O5': (-114.199,24.179,34.268)
O4': (-113.342,21.275,34.329)
C5': (-113.074,23.556,33.662)
P: (-115.165,25.116,33.428)
C4': (-112.533,22.459,34.536)
C2': (-111.080,20.526,34.303)
O2': (-110.533,19.960,35.473)
N1: (-112.818,19.593,32.785)
O4: (-113.409,18.028,29.131)
O2: (-112.223,17.507,33.491)
C6: (-113.205,20.412,31.745)
C5: (-113.422,19.962,30.507)
O3': (-110.169,22.607,35.237)
N3: (-112.825,17.812,31.306)
OP1: (-115.080,26.507,33.939)
OP2: (-114.965,24.873,31.978)
C2: (-112.590,18.248,32.590)
C1': (-112.540,20.125,34.133)
C3': (-111.087,22.059,34.265)
O5': (-114.199,24.179,34.268)
O4': (-113.342,21.275,34.329)
C5': (-113.074,23.556,33.662)
P: (-115.165,25.116,33.428)
C4': (-112.533,22.459,34.536)
C2': (-111.080,20.526,34.303)
O2': (-110.533,19.960,35.473)
N1: (-112.818,19.593,32.785)
O4: (-113.409,18.028,29.131)
O2: (-112.223,17.507,33.491)
C6: (-113.205,20.412,31.745)
C5: (-113.422,19.962,30.507)
O3': (-110.169,22.607,35.237)
Image (generated by PyMOL):