Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11511:11512
Extra
PDB:
ATOM 1 O3' A A1510 32.062 3.646 176.465 1.00352.16 O
ATOM 2 P U A1511 33.207 4.435 177.285 1.00253.17 P
ATOM 3 OP1 U A1511 33.217 3.886 178.664 1.00253.69 O
ATOM 4 OP2 U A1511 32.949 5.887 177.101 1.00253.29 O
ATOM 5 O5' U A1511 34.553 4.022 176.526 1.00253.00 O
ATOM 6 C5' U A1511 35.050 4.817 175.459 1.00252.75 C
ATOM 7 C4' U A1511 36.489 4.510 175.124 1.00252.80 C
ATOM 8 O4' U A1511 36.774 5.048 173.805 1.00252.36 O
ATOM 9 C3' U A1511 37.533 5.135 176.060 1.00253.50 C
ATOM 10 O3' U A1511 37.962 4.246 177.087 1.00253.88 O
ATOM 11 C2' U A1511 38.660 5.575 175.124 1.00253.36 C
ATOM 12 O2' U A1511 39.558 4.502 174.874 1.00253.22 O
ATOM 13 C1' U A1511 37.904 5.879 173.836 1.00252.71 C
ATOM 14 N1 U A1511 37.439 7.293 173.766 1.00252.84 N
ATOM 15 C2 U A1511 36.856 7.660 172.569 1.00252.28 C
ATOM 16 O2 U A1511 36.722 6.881 171.653 1.00251.73 O
ATOM 17 N3 U A1511 36.415 8.952 172.480 1.00252.39 N
ATOM 18 C4 U A1511 36.510 9.913 173.457 1.00253.00 C
ATOM 19 O4 U A1511 36.072 11.037 173.229 1.00253.02 O
ATOM 20 C5 U A1511 37.131 9.474 174.670 1.00253.56 C
ATOM 21 C6 U A1511 37.568 8.214 174.781 1.00253.47 C
ATOM 22 P U A1512 37.293 4.289 178.554 1.00252.48 P
ATOM 23 OP1 U A1512 37.086 2.884 178.980 1.00252.40 O
ATOM 24 OP2 U A1512 36.119 5.190 178.475 1.00252.39 O
ATOM 25 O5' U A1512 38.428 4.962 179.446 1.00253.19 O
TER
ATOM 1 O3' U B1511 37.962 4.246 177.087 1.00253.88 O
ATOM 2 P U B1512 37.293 4.289 178.554 1.00252.48 P
ATOM 3 OP1 U B1512 37.086 2.884 178.980 1.00252.40 O
ATOM 4 OP2 U B1512 36.119 5.190 178.475 1.00252.39 O
ATOM 5 O5' U B1512 38.428 4.962 179.446 1.00253.19 O
ATOM 6 C5' U B1512 38.495 6.378 179.595 1.00253.51 C
ATOM 7 C4' U B1512 39.557 6.982 178.707 1.00253.41 C
ATOM 8 O4' U B1512 38.946 7.975 177.844 1.00253.09 O
ATOM 9 C3' U B1512 40.700 7.681 179.440 1.00254.05 C
ATOM 10 O3' U B1512 41.926 7.495 178.719 1.00253.92 O
ATOM 11 C2' U B1512 40.280 9.155 179.413 1.00254.22 C
ATOM 12 O2' U B1512 41.353 10.075 179.454 1.00254.59 O
ATOM 13 C1' U B1512 39.482 9.260 178.103 1.00253.52 C
ATOM 14 N1 U B1512 38.337 10.206 178.174 1.00253.51 N
ATOM 15 C2 U B1512 38.370 11.399 177.477 1.00253.42 C
ATOM 16 O2 U B1512 39.320 11.744 176.793 1.00253.34 O
ATOM 17 N3 U B1512 37.240 12.178 177.625 1.00253.42 N
ATOM 18 C4 U B1512 36.108 11.898 178.369 1.00253.50 C
ATOM 19 O4 U B1512 35.175 12.703 178.401 1.00253.49 O
ATOM 20 C5 U B1512 36.147 10.646 179.052 1.00253.59 C
ATOM 21 C6 U B1512 37.229 9.872 178.926 1.00253.59 C
ATOM 22 P U B1513 42.353 6.022 178.209 1.00256.18 P
ATOM 23 OP1 U B1513 41.969 5.932 176.776 1.00255.46 O
ATOM 24 OP2 U B1513 41.778 5.036 179.164 1.00256.34 O
ATOM 25 O5' U B1513 43.940 6.027 178.344 1.00256.53 O
TER
ATOM 2 P U A1511 33.207 4.435 177.285 1.00253.17 P
ATOM 3 OP1 U A1511 33.217 3.886 178.664 1.00253.69 O
ATOM 4 OP2 U A1511 32.949 5.887 177.101 1.00253.29 O
ATOM 5 O5' U A1511 34.553 4.022 176.526 1.00253.00 O
ATOM 6 C5' U A1511 35.050 4.817 175.459 1.00252.75 C
ATOM 7 C4' U A1511 36.489 4.510 175.124 1.00252.80 C
ATOM 8 O4' U A1511 36.774 5.048 173.805 1.00252.36 O
ATOM 9 C3' U A1511 37.533 5.135 176.060 1.00253.50 C
ATOM 10 O3' U A1511 37.962 4.246 177.087 1.00253.88 O
ATOM 11 C2' U A1511 38.660 5.575 175.124 1.00253.36 C
ATOM 12 O2' U A1511 39.558 4.502 174.874 1.00253.22 O
ATOM 13 C1' U A1511 37.904 5.879 173.836 1.00252.71 C
ATOM 14 N1 U A1511 37.439 7.293 173.766 1.00252.84 N
ATOM 15 C2 U A1511 36.856 7.660 172.569 1.00252.28 C
ATOM 16 O2 U A1511 36.722 6.881 171.653 1.00251.73 O
ATOM 17 N3 U A1511 36.415 8.952 172.480 1.00252.39 N
ATOM 18 C4 U A1511 36.510 9.913 173.457 1.00253.00 C
ATOM 19 O4 U A1511 36.072 11.037 173.229 1.00253.02 O
ATOM 20 C5 U A1511 37.131 9.474 174.670 1.00253.56 C
ATOM 21 C6 U A1511 37.568 8.214 174.781 1.00253.47 C
ATOM 22 P U A1512 37.293 4.289 178.554 1.00252.48 P
ATOM 23 OP1 U A1512 37.086 2.884 178.980 1.00252.40 O
ATOM 24 OP2 U A1512 36.119 5.190 178.475 1.00252.39 O
ATOM 25 O5' U A1512 38.428 4.962 179.446 1.00253.19 O
TER
ATOM 1 O3' U B1511 37.962 4.246 177.087 1.00253.88 O
ATOM 2 P U B1512 37.293 4.289 178.554 1.00252.48 P
ATOM 3 OP1 U B1512 37.086 2.884 178.980 1.00252.40 O
ATOM 4 OP2 U B1512 36.119 5.190 178.475 1.00252.39 O
ATOM 5 O5' U B1512 38.428 4.962 179.446 1.00253.19 O
ATOM 6 C5' U B1512 38.495 6.378 179.595 1.00253.51 C
ATOM 7 C4' U B1512 39.557 6.982 178.707 1.00253.41 C
ATOM 8 O4' U B1512 38.946 7.975 177.844 1.00253.09 O
ATOM 9 C3' U B1512 40.700 7.681 179.440 1.00254.05 C
ATOM 10 O3' U B1512 41.926 7.495 178.719 1.00253.92 O
ATOM 11 C2' U B1512 40.280 9.155 179.413 1.00254.22 C
ATOM 12 O2' U B1512 41.353 10.075 179.454 1.00254.59 O
ATOM 13 C1' U B1512 39.482 9.260 178.103 1.00253.52 C
ATOM 14 N1 U B1512 38.337 10.206 178.174 1.00253.51 N
ATOM 15 C2 U B1512 38.370 11.399 177.477 1.00253.42 C
ATOM 16 O2 U B1512 39.320 11.744 176.793 1.00253.34 O
ATOM 17 N3 U B1512 37.240 12.178 177.625 1.00253.42 N
ATOM 18 C4 U B1512 36.108 11.898 178.369 1.00253.50 C
ATOM 19 O4 U B1512 35.175 12.703 178.401 1.00253.49 O
ATOM 20 C5 U B1512 36.147 10.646 179.052 1.00253.59 C
ATOM 21 C6 U B1512 37.229 9.872 178.926 1.00253.59 C
ATOM 22 P U B1513 42.353 6.022 178.209 1.00256.18 P
ATOM 23 OP1 U B1513 41.969 5.932 176.776 1.00255.46 O
ATOM 24 OP2 U B1513 41.778 5.036 179.164 1.00256.34 O
ATOM 25 O5' U B1513 43.940 6.027 178.344 1.00256.53 O
TER
Atoms:
C4: (36.510,9.913,173.457)
N3: (36.415,8.952,172.480)
OP1: (33.217,3.886,178.664)
OP2: (32.949,5.887,177.101)
C2: (36.856,7.660,172.569)
C1': (37.904,5.879,173.836)
C3': (37.533,5.135,176.060)
O5': (34.553,4.022,176.526)
O4': (36.774,5.048,173.805)
C5': (35.050,4.817,175.459)
P: (33.207,4.435,177.285)
C4': (36.489,4.510,175.124)
C2': (38.660,5.575,175.124)
O2': (39.558,4.502,174.874)
N1: (37.439,7.293,173.766)
O4: (36.072,11.037,173.229)
O2: (36.722,6.881,171.653)
C6: (37.568,8.214,174.781)
C5: (37.131,9.474,174.670)
O3': (37.962,4.246,177.087)
N3: (36.415,8.952,172.480)
OP1: (33.217,3.886,178.664)
OP2: (32.949,5.887,177.101)
C2: (36.856,7.660,172.569)
C1': (37.904,5.879,173.836)
C3': (37.533,5.135,176.060)
O5': (34.553,4.022,176.526)
O4': (36.774,5.048,173.805)
C5': (35.050,4.817,175.459)
P: (33.207,4.435,177.285)
C4': (36.489,4.510,175.124)
C2': (38.660,5.575,175.124)
O2': (39.558,4.502,174.874)
N1: (37.439,7.293,173.766)
O4: (36.072,11.037,173.229)
O2: (36.722,6.881,171.653)
C6: (37.568,8.214,174.781)
C5: (37.131,9.474,174.670)
O3': (37.962,4.246,177.087)
C4: (36.108,11.898,178.369)
N3: (37.240,12.178,177.625)
OP1: (37.086,2.884,178.980)
OP2: (36.119,5.190,178.475)
C2: (38.370,11.399,177.477)
C1': (39.482,9.260,178.103)
C3': (40.700,7.681,179.440)
O5': (38.428,4.962,179.446)
O4': (38.946,7.975,177.844)
C5': (38.495,6.378,179.595)
P: (37.293,4.289,178.554)
C4': (39.557,6.982,178.707)
C2': (40.280,9.155,179.413)
O2': (41.353,10.075,179.454)
N1: (38.337,10.206,178.174)
O4: (35.175,12.703,178.401)
O2: (39.320,11.744,176.793)
C6: (37.229,9.872,178.926)
C5: (36.147,10.646,179.052)
O3': (41.926,7.495,178.719)
N3: (37.240,12.178,177.625)
OP1: (37.086,2.884,178.980)
OP2: (36.119,5.190,178.475)
C2: (38.370,11.399,177.477)
C1': (39.482,9.260,178.103)
C3': (40.700,7.681,179.440)
O5': (38.428,4.962,179.446)
O4': (38.946,7.975,177.844)
C5': (38.495,6.378,179.595)
P: (37.293,4.289,178.554)
C4': (39.557,6.982,178.707)
C2': (40.280,9.155,179.413)
O2': (41.353,10.075,179.454)
N1: (38.337,10.206,178.174)
O4: (35.175,12.703,178.401)
O2: (39.320,11.744,176.793)
C6: (37.229,9.872,178.926)
C5: (36.147,10.646,179.052)
O3': (41.926,7.495,178.719)
Image (generated by PyMOL):