Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11539:11470
Extra
PDB:
ATOM 1 O3' A A1538 26.062 36.545 140.894 1.00 68.39 O
ATOM 2 P U A1539 25.781 37.220 139.488 1.00 60.92 P
ATOM 3 OP1 U A1539 25.374 38.638 139.749 1.00 61.52 O
ATOM 4 OP2 U A1539 24.860 36.344 138.769 1.00 60.34 O
ATOM 5 O5' U A1539 27.207 37.182 138.808 1.00 60.53 O
ATOM 6 C5' U A1539 28.287 37.938 139.341 1.00 61.00 C
ATOM 7 C4' U A1539 28.322 39.331 138.772 1.00 61.18 C
ATOM 8 O4' U A1539 29.285 40.119 139.513 1.00 61.77 O
ATOM 9 C3' U A1539 28.757 39.428 137.313 1.00 60.52 C
ATOM 10 O3' U A1539 28.200 40.605 136.742 1.00 60.67 O
ATOM 11 C2' U A1539 30.240 39.624 137.460 1.00 60.62 C
ATOM 12 O2' U A1539 30.872 40.138 136.320 1.00 60.26 O
ATOM 13 C1' U A1539 30.247 40.612 138.610 1.00 61.49 C
ATOM 14 N1 U A1539 31.531 40.738 139.305 1.00 61.84 N
ATOM 15 C2 U A1539 31.624 41.896 139.999 1.00 62.57 C
ATOM 16 O2 U A1539 30.704 42.700 140.046 1.00 62.89 O
ATOM 17 N3 U A1539 32.815 42.052 140.633 1.00 62.92 N
ATOM 18 C4 U A1539 33.893 41.196 140.643 1.00 62.62 C
ATOM 19 O4 U A1539 34.899 41.520 141.286 1.00 63.05 O
ATOM 20 C5 U A1539 33.710 40.001 139.891 1.00 61.85 C
ATOM 21 C6 U A1539 32.556 39.822 139.247 1.00 61.49 C
ATOM 22 P C A1540 27.222 40.504 135.489 1.00 59.80 P
ATOM 23 OP1 C A1540 25.966 39.918 135.953 1.00 59.86 O
ATOM 24 OP2 C A1540 27.953 39.832 134.419 1.00 59.07 O
ATOM 25 O5' C A1540 27.001 42.012 135.118 1.00 60.16 O
TER
ATOM 1 O3' G B1469 35.651 31.648 139.420 1.00 59.73 O
ATOM 2 P U B1470 35.722 32.354 137.982 1.00 62.96 P
ATOM 3 OP1 U B1470 36.087 31.291 137.000 1.00 62.21 O
ATOM 4 OP2 U B1470 36.608 33.557 138.107 1.00 63.37 O
ATOM 5 O5' U B1470 34.220 32.812 137.732 1.00 62.97 O
ATOM 6 C5' U B1470 33.130 32.112 138.310 1.00 63.04 C
ATOM 7 C4' U B1470 31.872 32.940 138.278 1.00 63.27 C
ATOM 8 O4' U B1470 31.742 33.641 139.553 1.00 64.08 O
ATOM 9 C3' U B1470 31.850 34.011 137.179 1.00 63.07 C
ATOM 10 O3' U B1470 30.512 34.276 136.754 1.00 62.98 O
ATOM 11 C2' U B1470 32.389 35.212 137.916 1.00 63.77 C
ATOM 12 O2' U B1470 32.067 36.466 137.346 1.00 63.90 O
ATOM 13 C1' U B1470 31.793 35.033 139.325 1.00 64.38 C
ATOM 14 N1 U B1470 32.641 35.668 140.339 1.00 65.06 N
ATOM 15 C2 U B1470 32.140 36.659 141.167 1.00 65.77 C
ATOM 16 O2 U B1470 30.969 36.949 141.229 1.00 65.90 O
ATOM 17 N3 U B1470 33.089 37.266 141.959 1.00 66.34 N
ATOM 18 C4 U B1470 34.453 37.024 141.938 1.00 66.26 C
ATOM 19 O4 U B1470 35.192 37.649 142.686 1.00 66.83 O
ATOM 20 C5 U B1470 34.897 36.016 141.024 1.00 65.49 C
ATOM 21 C6 U B1470 34.004 35.407 140.252 1.00 64.93 C
ATOM 22 P C B1471 29.940 33.620 135.392 1.00 76.57 P
ATOM 23 OP1 C B1471 28.564 34.178 135.174 1.00 76.67 O
ATOM 24 OP2 C B1471 30.097 32.123 135.501 1.00 76.18 O
ATOM 25 O5' C B1471 30.941 34.194 134.295 1.00 76.23 O
TER
ATOM 2 P U A1539 25.781 37.220 139.488 1.00 60.92 P
ATOM 3 OP1 U A1539 25.374 38.638 139.749 1.00 61.52 O
ATOM 4 OP2 U A1539 24.860 36.344 138.769 1.00 60.34 O
ATOM 5 O5' U A1539 27.207 37.182 138.808 1.00 60.53 O
ATOM 6 C5' U A1539 28.287 37.938 139.341 1.00 61.00 C
ATOM 7 C4' U A1539 28.322 39.331 138.772 1.00 61.18 C
ATOM 8 O4' U A1539 29.285 40.119 139.513 1.00 61.77 O
ATOM 9 C3' U A1539 28.757 39.428 137.313 1.00 60.52 C
ATOM 10 O3' U A1539 28.200 40.605 136.742 1.00 60.67 O
ATOM 11 C2' U A1539 30.240 39.624 137.460 1.00 60.62 C
ATOM 12 O2' U A1539 30.872 40.138 136.320 1.00 60.26 O
ATOM 13 C1' U A1539 30.247 40.612 138.610 1.00 61.49 C
ATOM 14 N1 U A1539 31.531 40.738 139.305 1.00 61.84 N
ATOM 15 C2 U A1539 31.624 41.896 139.999 1.00 62.57 C
ATOM 16 O2 U A1539 30.704 42.700 140.046 1.00 62.89 O
ATOM 17 N3 U A1539 32.815 42.052 140.633 1.00 62.92 N
ATOM 18 C4 U A1539 33.893 41.196 140.643 1.00 62.62 C
ATOM 19 O4 U A1539 34.899 41.520 141.286 1.00 63.05 O
ATOM 20 C5 U A1539 33.710 40.001 139.891 1.00 61.85 C
ATOM 21 C6 U A1539 32.556 39.822 139.247 1.00 61.49 C
ATOM 22 P C A1540 27.222 40.504 135.489 1.00 59.80 P
ATOM 23 OP1 C A1540 25.966 39.918 135.953 1.00 59.86 O
ATOM 24 OP2 C A1540 27.953 39.832 134.419 1.00 59.07 O
ATOM 25 O5' C A1540 27.001 42.012 135.118 1.00 60.16 O
TER
ATOM 1 O3' G B1469 35.651 31.648 139.420 1.00 59.73 O
ATOM 2 P U B1470 35.722 32.354 137.982 1.00 62.96 P
ATOM 3 OP1 U B1470 36.087 31.291 137.000 1.00 62.21 O
ATOM 4 OP2 U B1470 36.608 33.557 138.107 1.00 63.37 O
ATOM 5 O5' U B1470 34.220 32.812 137.732 1.00 62.97 O
ATOM 6 C5' U B1470 33.130 32.112 138.310 1.00 63.04 C
ATOM 7 C4' U B1470 31.872 32.940 138.278 1.00 63.27 C
ATOM 8 O4' U B1470 31.742 33.641 139.553 1.00 64.08 O
ATOM 9 C3' U B1470 31.850 34.011 137.179 1.00 63.07 C
ATOM 10 O3' U B1470 30.512 34.276 136.754 1.00 62.98 O
ATOM 11 C2' U B1470 32.389 35.212 137.916 1.00 63.77 C
ATOM 12 O2' U B1470 32.067 36.466 137.346 1.00 63.90 O
ATOM 13 C1' U B1470 31.793 35.033 139.325 1.00 64.38 C
ATOM 14 N1 U B1470 32.641 35.668 140.339 1.00 65.06 N
ATOM 15 C2 U B1470 32.140 36.659 141.167 1.00 65.77 C
ATOM 16 O2 U B1470 30.969 36.949 141.229 1.00 65.90 O
ATOM 17 N3 U B1470 33.089 37.266 141.959 1.00 66.34 N
ATOM 18 C4 U B1470 34.453 37.024 141.938 1.00 66.26 C
ATOM 19 O4 U B1470 35.192 37.649 142.686 1.00 66.83 O
ATOM 20 C5 U B1470 34.897 36.016 141.024 1.00 65.49 C
ATOM 21 C6 U B1470 34.004 35.407 140.252 1.00 64.93 C
ATOM 22 P C B1471 29.940 33.620 135.392 1.00 76.57 P
ATOM 23 OP1 C B1471 28.564 34.178 135.174 1.00 76.67 O
ATOM 24 OP2 C B1471 30.097 32.123 135.501 1.00 76.18 O
ATOM 25 O5' C B1471 30.941 34.194 134.295 1.00 76.23 O
TER
Atoms:
C4: (33.893,41.196,140.643)
N3: (32.815,42.052,140.633)
OP1: (25.374,38.638,139.749)
OP2: (24.860,36.344,138.769)
C2: (31.624,41.896,139.999)
C1': (30.247,40.612,138.610)
C3': (28.757,39.428,137.313)
O5': (27.207,37.182,138.808)
O4': (29.285,40.119,139.513)
C5': (28.287,37.938,139.341)
P: (25.781,37.220,139.488)
C4': (28.322,39.331,138.772)
C2': (30.240,39.624,137.460)
O2': (30.872,40.138,136.320)
N1: (31.531,40.738,139.305)
O4: (34.899,41.520,141.286)
O2: (30.704,42.700,140.046)
C6: (32.556,39.822,139.247)
C5: (33.710,40.001,139.891)
O3': (28.200,40.605,136.742)
N3: (32.815,42.052,140.633)
OP1: (25.374,38.638,139.749)
OP2: (24.860,36.344,138.769)
C2: (31.624,41.896,139.999)
C1': (30.247,40.612,138.610)
C3': (28.757,39.428,137.313)
O5': (27.207,37.182,138.808)
O4': (29.285,40.119,139.513)
C5': (28.287,37.938,139.341)
P: (25.781,37.220,139.488)
C4': (28.322,39.331,138.772)
C2': (30.240,39.624,137.460)
O2': (30.872,40.138,136.320)
N1: (31.531,40.738,139.305)
O4: (34.899,41.520,141.286)
O2: (30.704,42.700,140.046)
C6: (32.556,39.822,139.247)
C5: (33.710,40.001,139.891)
O3': (28.200,40.605,136.742)
C4: (34.453,37.024,141.938)
N3: (33.089,37.266,141.959)
OP1: (36.087,31.291,137.000)
OP2: (36.608,33.557,138.107)
C2: (32.140,36.659,141.167)
C1': (31.793,35.033,139.325)
C3': (31.850,34.011,137.179)
O5': (34.220,32.812,137.732)
O4': (31.742,33.641,139.553)
C5': (33.130,32.112,138.310)
P: (35.722,32.354,137.982)
C4': (31.872,32.940,138.278)
C2': (32.389,35.212,137.916)
O2': (32.067,36.466,137.346)
N1: (32.641,35.668,140.339)
O4: (35.192,37.649,142.686)
O2: (30.969,36.949,141.229)
C6: (34.004,35.407,140.252)
C5: (34.897,36.016,141.024)
O3': (30.512,34.276,136.754)
N3: (33.089,37.266,141.959)
OP1: (36.087,31.291,137.000)
OP2: (36.608,33.557,138.107)
C2: (32.140,36.659,141.167)
C1': (31.793,35.033,139.325)
C3': (31.850,34.011,137.179)
O5': (34.220,32.812,137.732)
O4': (31.742,33.641,139.553)
C5': (33.130,32.112,138.310)
P: (35.722,32.354,137.982)
C4': (31.872,32.940,138.278)
C2': (32.389,35.212,137.916)
O2': (32.067,36.466,137.346)
N1: (32.641,35.668,140.339)
O4: (35.192,37.649,142.686)
O2: (30.969,36.949,141.229)
C6: (34.004,35.407,140.252)
C5: (34.897,36.016,141.024)
O3': (30.512,34.276,136.754)
Image (generated by PyMOL):