Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12668:12667
Extra
PDB:
ATOM 1 O3' U A2667 10.151 26.872 43.073 1.00 42.74 O
ATOM 2 P U A2668 10.375 25.822 44.276 1.00 48.10 P
ATOM 3 OP1 U A2668 11.750 25.355 44.222 1.00 47.77 O
ATOM 4 OP2 U A2668 9.278 24.823 44.173 1.00 48.09 O
ATOM 5 O5' U A2668 10.158 26.743 45.569 1.00 48.16 O
ATOM 6 C5' U A2668 10.552 28.126 45.583 1.00 48.41 C
ATOM 7 C4' U A2668 9.385 29.098 45.821 1.00 48.82 C
ATOM 8 O4' U A2668 8.422 29.012 44.731 1.00 49.12 O
ATOM 9 C3' U A2668 8.517 28.875 47.043 1.00 48.76 C
ATOM 10 O3' U A2668 9.069 29.304 48.267 1.00 48.61 O
ATOM 11 C2' U A2668 7.241 29.617 46.679 1.00 49.22 C
ATOM 12 O2' U A2668 7.399 31.009 46.836 1.00 49.52 O
ATOM 13 C1' U A2668 7.123 29.317 45.210 1.00 49.37 C
ATOM 14 N1 U A2668 6.242 28.182 45.003 1.00 49.30 N
ATOM 15 C2 U A2668 4.879 28.414 45.013 1.00 49.62 C
ATOM 16 O2 U A2668 4.433 29.549 45.114 1.00 49.97 O
ATOM 17 N3 U A2668 4.056 27.316 44.837 1.00 49.56 N
ATOM 18 C4 U A2668 4.513 26.008 44.687 1.00 49.19 C
ATOM 19 O4 U A2668 3.766 25.020 44.552 1.00 49.14 O
ATOM 20 C5 U A2668 5.931 25.900 44.756 1.00 48.87 C
ATOM 21 C6 U A2668 6.737 26.948 44.903 1.00 48.93 C
ATOM 22 P G A2669 8.367 28.810 49.633 1.00 42.48 P
ATOM 23 OP1 G A2669 9.228 29.237 50.769 1.00 42.30 O
ATOM 24 OP2 G A2669 8.058 27.367 49.473 1.00 42.21 O
ATOM 25 O5' G A2669 7.006 29.613 49.653 1.00 42.92 O
TER
ATOM 1 O3' G B2666 13.568 31.042 40.543 1.00 47.28 O
ATOM 2 P U B2667 13.762 30.305 41.903 1.00 43.12 P
ATOM 3 OP1 U B2667 13.299 31.206 42.966 1.00 43.26 O
ATOM 4 OP2 U B2667 15.148 29.807 41.943 1.00 42.77 O
ATOM 5 O5' U B2667 12.764 29.101 41.745 1.00 43.02 O
ATOM 6 C5' U B2667 11.383 29.339 41.547 1.00 43.34 C
ATOM 7 C4' U B2667 10.673 28.112 41.061 1.00 43.26 C
ATOM 8 O4' U B2667 11.098 27.772 39.722 1.00 43.33 O
ATOM 9 C3' U B2667 10.905 26.859 41.863 1.00 42.80 C
ATOM 10 O3' U B2667 10.151 26.872 43.073 1.00 42.74 O
ATOM 11 C2' U B2667 10.516 25.778 40.861 1.00 42.79 C
ATOM 12 O2' U B2667 9.119 25.615 40.814 1.00 43.01 O
ATOM 13 C1' U B2667 10.967 26.398 39.530 1.00 43.07 C
ATOM 14 N1 U B2667 12.266 25.861 39.090 1.00 42.81 N
ATOM 15 C2 U B2667 12.240 24.647 38.411 1.00 42.67 C
ATOM 16 O2 U B2667 11.204 24.080 38.155 1.00 42.78 O
ATOM 17 N3 U B2667 13.443 24.138 38.015 1.00 42.44 N
ATOM 18 C4 U B2667 14.656 24.706 38.318 1.00 42.30 C
ATOM 19 O4 U B2667 15.647 24.121 37.935 1.00 42.09 O
ATOM 20 C5 U B2667 14.654 25.926 39.041 1.00 42.44 C
ATOM 21 C6 U B2667 13.479 26.459 39.386 1.00 42.68 C
ATOM 22 P U B2668 10.375 25.822 44.276 1.00 48.10 P
ATOM 23 OP1 U B2668 11.750 25.355 44.222 1.00 47.77 O
ATOM 24 OP2 U B2668 9.278 24.823 44.173 1.00 48.09 O
ATOM 25 O5' U B2668 10.158 26.743 45.569 1.00 48.16 O
TER
ATOM 2 P U A2668 10.375 25.822 44.276 1.00 48.10 P
ATOM 3 OP1 U A2668 11.750 25.355 44.222 1.00 47.77 O
ATOM 4 OP2 U A2668 9.278 24.823 44.173 1.00 48.09 O
ATOM 5 O5' U A2668 10.158 26.743 45.569 1.00 48.16 O
ATOM 6 C5' U A2668 10.552 28.126 45.583 1.00 48.41 C
ATOM 7 C4' U A2668 9.385 29.098 45.821 1.00 48.82 C
ATOM 8 O4' U A2668 8.422 29.012 44.731 1.00 49.12 O
ATOM 9 C3' U A2668 8.517 28.875 47.043 1.00 48.76 C
ATOM 10 O3' U A2668 9.069 29.304 48.267 1.00 48.61 O
ATOM 11 C2' U A2668 7.241 29.617 46.679 1.00 49.22 C
ATOM 12 O2' U A2668 7.399 31.009 46.836 1.00 49.52 O
ATOM 13 C1' U A2668 7.123 29.317 45.210 1.00 49.37 C
ATOM 14 N1 U A2668 6.242 28.182 45.003 1.00 49.30 N
ATOM 15 C2 U A2668 4.879 28.414 45.013 1.00 49.62 C
ATOM 16 O2 U A2668 4.433 29.549 45.114 1.00 49.97 O
ATOM 17 N3 U A2668 4.056 27.316 44.837 1.00 49.56 N
ATOM 18 C4 U A2668 4.513 26.008 44.687 1.00 49.19 C
ATOM 19 O4 U A2668 3.766 25.020 44.552 1.00 49.14 O
ATOM 20 C5 U A2668 5.931 25.900 44.756 1.00 48.87 C
ATOM 21 C6 U A2668 6.737 26.948 44.903 1.00 48.93 C
ATOM 22 P G A2669 8.367 28.810 49.633 1.00 42.48 P
ATOM 23 OP1 G A2669 9.228 29.237 50.769 1.00 42.30 O
ATOM 24 OP2 G A2669 8.058 27.367 49.473 1.00 42.21 O
ATOM 25 O5' G A2669 7.006 29.613 49.653 1.00 42.92 O
TER
ATOM 1 O3' G B2666 13.568 31.042 40.543 1.00 47.28 O
ATOM 2 P U B2667 13.762 30.305 41.903 1.00 43.12 P
ATOM 3 OP1 U B2667 13.299 31.206 42.966 1.00 43.26 O
ATOM 4 OP2 U B2667 15.148 29.807 41.943 1.00 42.77 O
ATOM 5 O5' U B2667 12.764 29.101 41.745 1.00 43.02 O
ATOM 6 C5' U B2667 11.383 29.339 41.547 1.00 43.34 C
ATOM 7 C4' U B2667 10.673 28.112 41.061 1.00 43.26 C
ATOM 8 O4' U B2667 11.098 27.772 39.722 1.00 43.33 O
ATOM 9 C3' U B2667 10.905 26.859 41.863 1.00 42.80 C
ATOM 10 O3' U B2667 10.151 26.872 43.073 1.00 42.74 O
ATOM 11 C2' U B2667 10.516 25.778 40.861 1.00 42.79 C
ATOM 12 O2' U B2667 9.119 25.615 40.814 1.00 43.01 O
ATOM 13 C1' U B2667 10.967 26.398 39.530 1.00 43.07 C
ATOM 14 N1 U B2667 12.266 25.861 39.090 1.00 42.81 N
ATOM 15 C2 U B2667 12.240 24.647 38.411 1.00 42.67 C
ATOM 16 O2 U B2667 11.204 24.080 38.155 1.00 42.78 O
ATOM 17 N3 U B2667 13.443 24.138 38.015 1.00 42.44 N
ATOM 18 C4 U B2667 14.656 24.706 38.318 1.00 42.30 C
ATOM 19 O4 U B2667 15.647 24.121 37.935 1.00 42.09 O
ATOM 20 C5 U B2667 14.654 25.926 39.041 1.00 42.44 C
ATOM 21 C6 U B2667 13.479 26.459 39.386 1.00 42.68 C
ATOM 22 P U B2668 10.375 25.822 44.276 1.00 48.10 P
ATOM 23 OP1 U B2668 11.750 25.355 44.222 1.00 47.77 O
ATOM 24 OP2 U B2668 9.278 24.823 44.173 1.00 48.09 O
ATOM 25 O5' U B2668 10.158 26.743 45.569 1.00 48.16 O
TER
Atoms:
C4: (4.513,26.008,44.687)
N3: (4.056,27.316,44.837)
OP1: (11.750,25.355,44.222)
OP2: (9.278,24.823,44.173)
C2: (4.879,28.414,45.013)
C1': (7.123,29.317,45.210)
C3': (8.517,28.875,47.043)
O5': (10.158,26.743,45.569)
O4': (8.422,29.012,44.731)
C5': (10.552,28.126,45.583)
P: (10.375,25.822,44.276)
C4': (9.385,29.098,45.821)
C2': (7.241,29.617,46.679)
O2': (7.399,31.009,46.836)
N1: (6.242,28.182,45.003)
O4: (3.766,25.020,44.552)
O2: (4.433,29.549,45.114)
C6: (6.737,26.948,44.903)
C5: (5.931,25.900,44.756)
O3': (9.069,29.304,48.267)
N3: (4.056,27.316,44.837)
OP1: (11.750,25.355,44.222)
OP2: (9.278,24.823,44.173)
C2: (4.879,28.414,45.013)
C1': (7.123,29.317,45.210)
C3': (8.517,28.875,47.043)
O5': (10.158,26.743,45.569)
O4': (8.422,29.012,44.731)
C5': (10.552,28.126,45.583)
P: (10.375,25.822,44.276)
C4': (9.385,29.098,45.821)
C2': (7.241,29.617,46.679)
O2': (7.399,31.009,46.836)
N1: (6.242,28.182,45.003)
O4: (3.766,25.020,44.552)
O2: (4.433,29.549,45.114)
C6: (6.737,26.948,44.903)
C5: (5.931,25.900,44.756)
O3': (9.069,29.304,48.267)
C4: (14.656,24.706,38.318)
N3: (13.443,24.138,38.015)
OP1: (13.299,31.206,42.966)
OP2: (15.148,29.807,41.943)
C2: (12.240,24.647,38.411)
C1': (10.967,26.398,39.530)
C3': (10.905,26.859,41.863)
O5': (12.764,29.101,41.745)
O4': (11.098,27.772,39.722)
C5': (11.383,29.339,41.547)
P: (13.762,30.305,41.903)
C4': (10.673,28.112,41.061)
C2': (10.516,25.778,40.861)
O2': (9.119,25.615,40.814)
N1: (12.266,25.861,39.090)
O4: (15.647,24.121,37.935)
O2: (11.204,24.080,38.155)
C6: (13.479,26.459,39.386)
C5: (14.654,25.926,39.041)
O3': (10.151,26.872,43.073)
N3: (13.443,24.138,38.015)
OP1: (13.299,31.206,42.966)
OP2: (15.148,29.807,41.943)
C2: (12.240,24.647,38.411)
C1': (10.967,26.398,39.530)
C3': (10.905,26.859,41.863)
O5': (12.764,29.101,41.745)
O4': (11.098,27.772,39.722)
C5': (11.383,29.339,41.547)
P: (13.762,30.305,41.903)
C4': (10.673,28.112,41.061)
C2': (10.516,25.778,40.861)
O2': (9.119,25.615,40.814)
N1: (12.266,25.861,39.090)
O4: (15.647,24.121,37.935)
O2: (11.204,24.080,38.155)
C6: (13.479,26.459,39.386)
C5: (14.654,25.926,39.041)
O3': (10.151,26.872,43.073)
Image (generated by PyMOL):