Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12687:12667
Extra
PDB:
ATOM 1 O3' A A2686 3.764 24.442 36.232 1.00 43.88 O
ATOM 2 P U A2687 2.286 24.263 36.786 1.00 50.39 P
ATOM 3 OP1 U A2687 1.805 22.923 36.332 1.00 50.31 O
ATOM 4 OP2 U A2687 1.557 25.448 36.398 1.00 50.88 O
ATOM 5 O5' U A2687 2.481 24.262 38.354 1.00 50.04 O
ATOM 6 C5' U A2687 3.080 23.158 38.996 1.00 49.56 C
ATOM 7 C4' U A2687 4.534 23.402 39.327 1.00 49.25 C
ATOM 8 O4' U A2687 4.798 24.820 39.344 1.00 49.49 O
ATOM 9 C3' U A2687 4.948 22.871 40.698 1.00 48.81 C
ATOM 10 O3' U A2687 6.246 22.336 40.654 1.00 48.46 O
ATOM 11 C2' U A2687 4.989 24.099 41.561 1.00 48.91 C
ATOM 12 O2' U A2687 5.908 23.989 42.623 1.00 48.53 O
ATOM 13 C1' U A2687 5.432 25.147 40.559 1.00 49.22 C
ATOM 14 N1 U A2687 5.104 26.539 40.940 1.00 49.53 N
ATOM 15 C2 U A2687 3.889 26.893 41.474 1.00 49.77 C
ATOM 16 O2 U A2687 2.928 26.143 41.643 1.00 49.77 O
ATOM 17 N3 U A2687 3.800 28.236 41.763 1.00 50.05 N
ATOM 18 C4 U A2687 4.715 29.235 41.637 1.00 50.12 C
ATOM 19 O4 U A2687 4.425 30.374 41.997 1.00 50.41 O
ATOM 20 C5 U A2687 5.950 28.771 41.122 1.00 49.85 C
ATOM 21 C6 U A2687 6.089 27.486 40.810 1.00 49.57 C
ATOM 22 P A A2688 6.515 20.954 39.918 1.00 44.31 P
ATOM 23 OP1 A A2688 5.304 20.594 39.154 1.00 44.61 O
ATOM 24 OP2 A A2688 7.025 20.004 40.930 1.00 43.85 O
ATOM 25 O5' A A2688 7.639 21.396 38.912 1.00 44.36 O
TER
ATOM 1 O3' G B2666 13.568 31.042 40.543 1.00 47.28 O
ATOM 2 P U B2667 13.762 30.305 41.903 1.00 43.12 P
ATOM 3 OP1 U B2667 13.299 31.206 42.966 1.00 43.26 O
ATOM 4 OP2 U B2667 15.148 29.807 41.943 1.00 42.77 O
ATOM 5 O5' U B2667 12.764 29.101 41.745 1.00 43.02 O
ATOM 6 C5' U B2667 11.383 29.339 41.547 1.00 43.34 C
ATOM 7 C4' U B2667 10.673 28.112 41.061 1.00 43.26 C
ATOM 8 O4' U B2667 11.098 27.772 39.722 1.00 43.33 O
ATOM 9 C3' U B2667 10.905 26.859 41.863 1.00 42.80 C
ATOM 10 O3' U B2667 10.151 26.872 43.073 1.00 42.74 O
ATOM 11 C2' U B2667 10.516 25.778 40.861 1.00 42.79 C
ATOM 12 O2' U B2667 9.119 25.615 40.814 1.00 43.01 O
ATOM 13 C1' U B2667 10.967 26.398 39.530 1.00 43.07 C
ATOM 14 N1 U B2667 12.266 25.861 39.090 1.00 42.81 N
ATOM 15 C2 U B2667 12.240 24.647 38.411 1.00 42.67 C
ATOM 16 O2 U B2667 11.204 24.080 38.155 1.00 42.78 O
ATOM 17 N3 U B2667 13.443 24.138 38.015 1.00 42.44 N
ATOM 18 C4 U B2667 14.656 24.706 38.318 1.00 42.30 C
ATOM 19 O4 U B2667 15.647 24.121 37.935 1.00 42.09 O
ATOM 20 C5 U B2667 14.654 25.926 39.041 1.00 42.44 C
ATOM 21 C6 U B2667 13.479 26.459 39.386 1.00 42.68 C
ATOM 22 P U B2668 10.375 25.822 44.276 1.00 48.10 P
ATOM 23 OP1 U B2668 11.750 25.355 44.222 1.00 47.77 O
ATOM 24 OP2 U B2668 9.278 24.823 44.173 1.00 48.09 O
ATOM 25 O5' U B2668 10.158 26.743 45.569 1.00 48.16 O
TER
ATOM 2 P U A2687 2.286 24.263 36.786 1.00 50.39 P
ATOM 3 OP1 U A2687 1.805 22.923 36.332 1.00 50.31 O
ATOM 4 OP2 U A2687 1.557 25.448 36.398 1.00 50.88 O
ATOM 5 O5' U A2687 2.481 24.262 38.354 1.00 50.04 O
ATOM 6 C5' U A2687 3.080 23.158 38.996 1.00 49.56 C
ATOM 7 C4' U A2687 4.534 23.402 39.327 1.00 49.25 C
ATOM 8 O4' U A2687 4.798 24.820 39.344 1.00 49.49 O
ATOM 9 C3' U A2687 4.948 22.871 40.698 1.00 48.81 C
ATOM 10 O3' U A2687 6.246 22.336 40.654 1.00 48.46 O
ATOM 11 C2' U A2687 4.989 24.099 41.561 1.00 48.91 C
ATOM 12 O2' U A2687 5.908 23.989 42.623 1.00 48.53 O
ATOM 13 C1' U A2687 5.432 25.147 40.559 1.00 49.22 C
ATOM 14 N1 U A2687 5.104 26.539 40.940 1.00 49.53 N
ATOM 15 C2 U A2687 3.889 26.893 41.474 1.00 49.77 C
ATOM 16 O2 U A2687 2.928 26.143 41.643 1.00 49.77 O
ATOM 17 N3 U A2687 3.800 28.236 41.763 1.00 50.05 N
ATOM 18 C4 U A2687 4.715 29.235 41.637 1.00 50.12 C
ATOM 19 O4 U A2687 4.425 30.374 41.997 1.00 50.41 O
ATOM 20 C5 U A2687 5.950 28.771 41.122 1.00 49.85 C
ATOM 21 C6 U A2687 6.089 27.486 40.810 1.00 49.57 C
ATOM 22 P A A2688 6.515 20.954 39.918 1.00 44.31 P
ATOM 23 OP1 A A2688 5.304 20.594 39.154 1.00 44.61 O
ATOM 24 OP2 A A2688 7.025 20.004 40.930 1.00 43.85 O
ATOM 25 O5' A A2688 7.639 21.396 38.912 1.00 44.36 O
TER
ATOM 1 O3' G B2666 13.568 31.042 40.543 1.00 47.28 O
ATOM 2 P U B2667 13.762 30.305 41.903 1.00 43.12 P
ATOM 3 OP1 U B2667 13.299 31.206 42.966 1.00 43.26 O
ATOM 4 OP2 U B2667 15.148 29.807 41.943 1.00 42.77 O
ATOM 5 O5' U B2667 12.764 29.101 41.745 1.00 43.02 O
ATOM 6 C5' U B2667 11.383 29.339 41.547 1.00 43.34 C
ATOM 7 C4' U B2667 10.673 28.112 41.061 1.00 43.26 C
ATOM 8 O4' U B2667 11.098 27.772 39.722 1.00 43.33 O
ATOM 9 C3' U B2667 10.905 26.859 41.863 1.00 42.80 C
ATOM 10 O3' U B2667 10.151 26.872 43.073 1.00 42.74 O
ATOM 11 C2' U B2667 10.516 25.778 40.861 1.00 42.79 C
ATOM 12 O2' U B2667 9.119 25.615 40.814 1.00 43.01 O
ATOM 13 C1' U B2667 10.967 26.398 39.530 1.00 43.07 C
ATOM 14 N1 U B2667 12.266 25.861 39.090 1.00 42.81 N
ATOM 15 C2 U B2667 12.240 24.647 38.411 1.00 42.67 C
ATOM 16 O2 U B2667 11.204 24.080 38.155 1.00 42.78 O
ATOM 17 N3 U B2667 13.443 24.138 38.015 1.00 42.44 N
ATOM 18 C4 U B2667 14.656 24.706 38.318 1.00 42.30 C
ATOM 19 O4 U B2667 15.647 24.121 37.935 1.00 42.09 O
ATOM 20 C5 U B2667 14.654 25.926 39.041 1.00 42.44 C
ATOM 21 C6 U B2667 13.479 26.459 39.386 1.00 42.68 C
ATOM 22 P U B2668 10.375 25.822 44.276 1.00 48.10 P
ATOM 23 OP1 U B2668 11.750 25.355 44.222 1.00 47.77 O
ATOM 24 OP2 U B2668 9.278 24.823 44.173 1.00 48.09 O
ATOM 25 O5' U B2668 10.158 26.743 45.569 1.00 48.16 O
TER
Atoms:
C4: (4.715,29.235,41.637)
N3: (3.800,28.236,41.763)
OP1: (1.805,22.923,36.332)
OP2: (1.557,25.448,36.398)
C2: (3.889,26.893,41.474)
C1': (5.432,25.147,40.559)
C3': (4.948,22.871,40.698)
O5': (2.481,24.262,38.354)
O4': (4.798,24.820,39.344)
C5': (3.080,23.158,38.996)
P: (2.286,24.263,36.786)
C4': (4.534,23.402,39.327)
C2': (4.989,24.099,41.561)
O2': (5.908,23.989,42.623)
N1: (5.104,26.539,40.940)
O4: (4.425,30.374,41.997)
O2: (2.928,26.143,41.643)
C6: (6.089,27.486,40.810)
C5: (5.950,28.771,41.122)
O3': (6.246,22.336,40.654)
N3: (3.800,28.236,41.763)
OP1: (1.805,22.923,36.332)
OP2: (1.557,25.448,36.398)
C2: (3.889,26.893,41.474)
C1': (5.432,25.147,40.559)
C3': (4.948,22.871,40.698)
O5': (2.481,24.262,38.354)
O4': (4.798,24.820,39.344)
C5': (3.080,23.158,38.996)
P: (2.286,24.263,36.786)
C4': (4.534,23.402,39.327)
C2': (4.989,24.099,41.561)
O2': (5.908,23.989,42.623)
N1: (5.104,26.539,40.940)
O4: (4.425,30.374,41.997)
O2: (2.928,26.143,41.643)
C6: (6.089,27.486,40.810)
C5: (5.950,28.771,41.122)
O3': (6.246,22.336,40.654)
C4: (14.656,24.706,38.318)
N3: (13.443,24.138,38.015)
OP1: (13.299,31.206,42.966)
OP2: (15.148,29.807,41.943)
C2: (12.240,24.647,38.411)
C1': (10.967,26.398,39.530)
C3': (10.905,26.859,41.863)
O5': (12.764,29.101,41.745)
O4': (11.098,27.772,39.722)
C5': (11.383,29.339,41.547)
P: (13.762,30.305,41.903)
C4': (10.673,28.112,41.061)
C2': (10.516,25.778,40.861)
O2': (9.119,25.615,40.814)
N1: (12.266,25.861,39.090)
O4: (15.647,24.121,37.935)
O2: (11.204,24.080,38.155)
C6: (13.479,26.459,39.386)
C5: (14.654,25.926,39.041)
O3': (10.151,26.872,43.073)
N3: (13.443,24.138,38.015)
OP1: (13.299,31.206,42.966)
OP2: (15.148,29.807,41.943)
C2: (12.240,24.647,38.411)
C1': (10.967,26.398,39.530)
C3': (10.905,26.859,41.863)
O5': (12.764,29.101,41.745)
O4': (11.098,27.772,39.722)
C5': (11.383,29.339,41.547)
P: (13.762,30.305,41.903)
C4': (10.673,28.112,41.061)
C2': (10.516,25.778,40.861)
O2': (9.119,25.615,40.814)
N1: (12.266,25.861,39.090)
O4: (15.647,24.121,37.935)
O2: (11.204,24.080,38.155)
C6: (13.479,26.459,39.386)
C5: (14.654,25.926,39.041)
O3': (10.151,26.872,43.073)
Image (generated by PyMOL):